Drosophila pseudoobscura: 4815647
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Entry
4815647 CDS
T01032
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4815647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
4815647
03009 Ribosome biogenesis [BR:
dpo03009
]
4815647
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
4815647
Spliceosome [BR:
dpo03041
]
Complex A
U1 snRNP components
U1 related factors
4815647
Complex B
4815647
Ribosome biogenesis [BR:
dpo03009
]
Eukaryotic type
Pre-60S particles
Helicases
4815647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Utp25_C
DNA_circ_N
TFIIA
Motif
Other DBs
NCBI-GeneID:
4815647
NCBI-ProteinID:
XP_001355346
UniProt:
Q29J98
LinkDB
All DBs
Position
X:complement(19373132..19382085)
Genome browser
AA seq
939 aa
AA seq
DB search
MYAGAYAPNTGGVQQHTGGGYYGNGAVAGAGGNGQRRDRLCYPRNNFAGAGSGAASLNGA
AGAAGGMHFSQHYGVMAYGIQSGISMGGGGAGTGGNPYRGGNTVQNGGAFGNGVAGGGAG
FQGGLHGKSPSYTQRYQKPHNGGLGNGGGGGGGYQAGGYNAAALGMLSKEERAEIQREKA
KNPGRNLVKPKWEQLQPFPKNFYVIHPNTLNMSEQAVAELRRELEITVSGNDLPHPVANF
EECSLPAHVIDEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHI
GKQPPILRGEGPIALVLAPTRELAQQIQSVVRDYGHLCQPEIRHTCIFGGSSKVPQARDL
ERGVEVIIATPGRLIDFLENRNTNLARCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ
VVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEMEKPQRMVRLLK
EIAPTNNSANNGNKIIIFVETKIKVEDILQIIRTEGYIATSIHGDKTQNERDSVLKDFRN
GKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDN
AKQARELISVLEEAGQTPSQALLDLARSMPSSGNYRGNKRWNSAGNTGGGGGGGSYNNGV
YQQRGNPLNYQAGGGYNNNRGGAATGGYQQYAAGGNGYQQNGISAGNWNRMNQLGQDGGS
RNGSTYRPRAPFNNGGPRAIMGHQGGGAGGAGGGSPQPHLGQQGGPFIQQAYRSRGQFVP
PNAATGGMPPRFQQFPKRDYQQQGVPQQHYQPQPQQQQQQAGQQQQKSSKDEKYAQQPAT
VAGSMVHYSPTNSPPIATVTAAAAAAVAGRATVSAGPGAAYMYDTNGVLTTTAAPGTNPY
ANQFSMPATYYTAQHHQFTATVAGPGPGPAAAIEQAGQH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccggagcatatgcacccaacactggcggcgtacagcagcacacaggaggcggc
tactacggcaatggggccgtggctggtgctggcggcaatggtcagcgtcgcgaccgtctt
tgctatccacgcaacaattttgccggcgctggcagcggggccgcttcgttgaacggagcc
gctggagcagctggcggcatgcactttagccagcactatggtgtgatggcctacggcata
cagagcggcatcagtatgggtggcggtggtgccgggaccggaggcaatccgtatcgcggc
ggaaacaccgtacagaatggcggtgcctttggcaatggagtggctggcggtggcgccggc
ttccaaggcggactgcacggaaagagtcccagctacacacaacgctaccagaagccgcac
aacggaggcctcggcaacgggggcggcggcggtggtggctatcaggccggcggctacaac
gccgcggcgctgggcatgctttccaaagaggagcgtgccgaaatccagcgcgagaaggcc
aagaatccgggccgcaacctggtcaagcccaagtgggagcagctgcagcccttccccaag
aacttttatgtcatccacccgaatacgttgaacatgtcggagcaggccgtggccgagctg
cgtcgcgagctggagataactgtctctggcaatgacctgccacacccggtggccaatttt
gaggagtgctcgctgccggcgcacgtcatagacgagatgaagcgccagggctttaccaag
cccacggccatccagtcccaaggctggcccatcgccctcagcggccgcgacctggtcggc
attgctcagaccgggtcgggcaagacgctggcctacatgctgccggccattgtgcacatt
ggcaaacagccgccgatactgcgcggcgagggacccatcgccctggtgctggcacccact
cgggagctggcccagcagatccagtcggtggtgcgtgactacggccacctctgccagccg
gagatccgtcacacttgcattttcggtggctcctcgaaggtgccgcaagcccgcgactta
gagcgcggcgtcgaggttattattgccacgccgggacggctgatcgacttcctggagaac
cgcaacaccaacctggcccgctgcacctacctggtgctggacgaggccgatcgcatgctc
gacatgggcttcgagccacagatccgcaagataatcgaacagatccgccccgatcgacag
gtggtcatgtggtctgccacctggccgaaggaggtgcaggccctggccggagatttcctc
aacgactacatccagatcaacattgggtcgatgaatctctcggccaaccacaacattcgc
cagatcgtcgaaatctgcacggagatggagaagcctcagcgcatggtgcggctgctcaag
gagatcgctccgaccaacaattcggccaacaatggcaacaagatcatcatctttgtggag
accaagatcaaggtggaggacatcttgcagatcatccgcaccgagggctatattgccact
tcgatacatggggacaagactcagaatgagcgcgactcggtgctgaaggacttccgcaat
ggcaagtccaacatattgattgccacagatgtggcctcgcgcggtctcgatgtcgaggat
ctacagtatgtgatcaattacgattatccaaactcgtccgagaactatgtgcatcgcatc
ggacgaaccggacgctgccagcagctgggcactgcctacacctttttcacgcccgacaac
gcaaagcaggcccgtgagctcatctcggttttggaggaggcgggtcagacgccctcgcag
gccctgctcgatctcgcccgctcgatgcccagctcgggcaactatcgtggcaataagcgc
tggaacagcgccggcaacaccggcggcggcggcggaggtggcagctacaacaacggtgtc
tatcagcagcgtggaaatccgctcaactatcaggccggtggaggatacaacaacaatcgc
gggggtgccgcaaccggtggctaccagcagtatgcagctggcggcaacggttaccagcag
aatggaatcagcgccggaaactggaaccgcatgaaccagctgggacaggatggcggcagc
cgcaacgggagcacttaccgcccacgcgcccccttcaacaatgggggtccgcgtgccatt
atgggacatcagggcggtggcgccggtggtgcaggagggggcagcccacagccgcatttg
ggccagcagggcggacccttcatacagcaggcgtaccgcagtcgcggccagttcgtaccg
ccgaatgccgccaccggaggcatgccaccgcgcttccagcagttccccaagcgcgattac
cagcagcagggtgtgccacagcagcactaccagccgcagccgcagcagcagcagcagcag
gcgggccagcaacagcagaagtcttcgaaggatgagaagtatgcacagcagccggccaca
gtggccgggtccatggtccactattcgcccaccaattcgccgccgattgcgaccgtgacc
gcagcagcagcagcagctgtggctggacgcgccaccgtgtccgctgggccgggggctgct
tacatgtacgacaccaacggtgtgctgaccaccaccgctgctccgggcaccaatccgtat
gccaatcagttcagcatgccggccacctactatacggcccagcatcaccagttcacggcg
accgtggctggtccgggaccgggtccggcggctgccatcgagcaggcgggtcagcattag
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