Drosophila pseudoobscura: 4816105
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Entry
4816105 CDS
T01032
Name
(RefSeq) LOW QUALITY PROTEIN: GATA zinc finger domain-containing protein 10
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpo03000
]
4816105
Transcription factors [BR:
dpo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
4816105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
4816105
NCBI-ProteinID:
XP_001355808
UniProt:
A0A6I8UHY5
LinkDB
All DBs
Position
4:complement(14712113..14715594)
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AA seq
797 aa
AA seq
DB search
MLTMESDMKGSLLHATMPPHHTSAALHGHAASPYSALAPLMNLGQSHLTHSQLSHHNHHH
HHHMSAHIAASQSPLSSLQTSMANTLNGTQVGQQQQQQQQQQSSPLHSSSELSPTQSSIG
SHHMTSPVSHQQQQQQHSQQQQHPTHMAAGSALSSMTGGGSNNNNNNNSATANKNQAHAD
RVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSEAEKRPFIDEAKRLRA
VHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGPGGAGDPVTPTRVQSQSQNQ
SVPSAAAAAAAAAATAQQARQDMYQMNAPNGYMPNGYMMHADPAGAAAYQNSYMGQHYAQ
RYDMGHMYNNGYAMYGTVSGGQTSPYGGSLQQPGSPSPYGSSSLQQQPASPQPYGGGGGG
GGQVSCQSHSPSDSSIKSEPVSPSPSAIALNNNNNNNNNHIMKREYVSATSAAAAAAAAA
AAGAGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHAAMHQHQVHQVHQQVQQQHQQH
QQQQQQQQQQHLHQQSLRAMAPLAHMXEMASAYGAAASTVSVSPPPLPLSSVYMPSAAQQ
QQQQQQQHQQLLNGRPSPTASGSGSSGGRSSAHSSGHAAAHSPALAAAAIAAAAYQLSSA
SVSVPASGSGSGSSVSISGSGSVSGSVSSSSTSSSAAAAVAASVAAAVAGSSASNVFTAA
SMLDMHQQQQHLEEQQHHHQHLHYQQQQQQQQQQQHQQQQQHYQQQQQHQLYHHYHHPGH
EAAVVASAAGLLDISTL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccatggaatcggatatgaagggcagcctgctgcatgccacaatgccgccgcat
cacaccagtgccgctctgcacggccatgccgcctcgccctactcggcgctggcgcctcta
atgaacctcggccagtcgcatctcacccactcgcagctgagtcaccataaccaccatcac
caccaccacatgagcgcccatattgcggccagccagagtcccctcagctcgctgcagacc
agcatggccaataccctcaacgggacgcaggtggggcaacagcaacaacaacaacagcag
cagcagagttctccgctgcacagctccagcgaactgagtcccacccagagcagcattggt
agccatcacatgacctcgcccgtgagccaccagcagcagcagcagcagcattcccagcag
cagcagcatcccacacacatggccgccggatccgctttgagcagcatgaccggtggtggc
agtaacaacaacaacaacaacaacagcgccacggccaacaagaatcaggcgcacgcggat
cgtgtgaagcggccgatgaatgcctttatggtgtggtcacgtggccagcgccggaagatg
gcctccgacaatccaaagatgcacaactcggagatttcgaagcggctgggagcccaatgg
aaggacctctccgaggccgagaagcggccgttcatcgacgaggcgaagcgcctgcgagcg
gtgcacatgaaggaacatccggactataagtatcgtccacgtcgcaagaccaaaactctg
accaagaccaaggagaagtacccgatgggtggcctgatgcccggtcagacggtgggggga
ccagggggagccggcgacccagtcacgcccacccgcgtccagagtcaatcgcagaaccag
tcggtaccatcggcggcggccgcagcagcggcggcggcggcaacggcccaacaggcccgc
caggacatgtaccagatgaatgcccccaacgggtatatgcccaacggttacatgatgcat
gcggatcccgccggagcggctgcctaccagaactcgtacatgggccagcactacgcccag
cggtacgacatgggccacatgtacaacaacggctatgcgatgtacggcacggtgtcgggt
ggccagacctcgccatacggaggcagcctccagcagccgggctccccgtccccgtacgga
tcgagcagtctccaacagcaacccgcctcgccacagccctatggcggaggaggcggcggc
ggcggtcaagtgtcctgccagagccatagtcccagcgattcgagtatcaagtcggagccg
gtgtcccccagtcccagtgccatagcgctcaacaacaacaataacaacaacaacaatcac
atcatgaagcgggagtacgtgtccgccacatcagcagcggcagcagcagcagcagcagcg
gcggccggcgccggaggggagctgaatcatctgatgaacatgtaccatctgccggacgag
cagcgtcatctgctgcactaccagactgactcgcccgatctgcagcagcagcacgcggcg
atgcaccagcaccaggtgcatcaagtgcaccaacaggtccagcaacaacaccagcagcac
cagcagcagcaacagcaacaacagcaacaacacctgcaccagcaatccctgcgagcgatg
gcgccgctggcacatatgtgagaaatggccagcgcctatggagcagcagcctcaactgtg
agcgtttcgccgccaccgctgccgctgtcgagtgtctatatgccgtcggcggcacaacag
cagcagcagcaacagcagcagcatcaacagttgctgaacggacggcccagtcccactgcg
tccggttctgggtcgtcgggtggccgctcctcggcgcattctagtggccatgcggccgcg
cattcacccgccttggcggccgctgccattgctgccgccgcctatcagctatcctctgcc
tctgtctctgtccctgcctctggttctggctccggctcctccgtttccatttctggatcc
ggatcggtgtcgggttcggtatcatcctcctccacctcctcgtcagcagcggccgcagtg
gctgcttctgtggcggcagccgttgccggttcgtctgcttccaatgttttcacggccgcc
agcatgctggacatgcaccaacagcagcaacatctggaggagcagcagcaccatcatcag
catctccactaccagcagcagcaacagcagcagcaacagcagcaacatcagcagcagcag
cagcattatcagcagcagcagcagcatcagctctaccatcactatcatcatcctgggcat
gaggcggcagttgttgccagtgccgccgggctcttggatatctccacattgtaa
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