Drosophila pseudoobscura: 4816338
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Entry
4816338 CDS
T01032
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4816338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4816338
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
4816338
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
4816338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
4816338
NCBI-ProteinID:
XP_001356291
UniProt:
A0A6I8V9Y4
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Position
4:complement(3051309..3056426)
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AA seq
882 aa
AA seq
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MAATRKLQGEIDRCLKKVAEGVETFEDIWKKVHNATNTNQKQKHLQEKYEADLKKEIKKL
QRLRDQIKSWIASAEIKDKSSLLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMD
PAQRIKDDARNWLTSSISSLQIQIDQYESEIESLLAGKKKRLDRDKQERMDDLRAKLDRH
KFHITKLETLLRLLDNDGVEADQVNKIKDDVEYYIDSSQEPDFEENEFIYDDIIGLDEVE
LSGTATTDSNNSNETSGSPSSVTSGGSPSQSPVTVQQVLPASVQAAANTGSSAASAALFQ
QQQAAAQSNGSNVGYASDTSAASSSATTSTDPAGSAATLSGGGGGGSGDKRNKSSESNTI
SKSKPQPQQIIKPTPVRATAKVAPGSETQVKIVSSTPSKNQQLPTAAAVVAASNSAPSSS
SGNGSGNGSGSSSVSAGTGAAAPTASGHNPAVQPHAPTPGLTAASIAAAAAAAVVSSSAT
PAIASISNVQGQSVIQATPTIAFAAVAKHNTSLLENGPVLQQQPISTTVAAIVGAGAQTQ
QPQHQQQQPAQLSNLQTNSSHLQNGLPVSVSSSDSNSNVVDAISLKTMAQEAINRSAIDV
NSLSQQPQTQQQQSNIDTRQQQSQQSLLQQHFSTENTANQPQQVASQQQQNAAAAAAAAA
AAAAAAAAMGTIAAAAHAAAASNGSTTGSGLMNLANAAGQPTSGSAKTHTSQQQMATTEA
HIPTLLGVTPLGPTPLQKEHQVQFQMMEAAYYHLPQPMDTEKLQTYFHRAPVPTPAHYPQ
AQLPIYDTVEFYQRLSTETLFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQRHEE
PKIINDDYEQGTYIYFDYEKWSQRKKEGFTFEYKYLEDKELN
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgaggaaattgcaaggcgaaattgatcgatgcttaaaaaaagtagccgag
ggcgtcgaaacgtttgaagatatttggaagaaagtacacaatgctacgaacactaaccag
aagcaaaaacatctgcaggagaaatatgaggcagatctcaaaaaggaaatcaagaaactt
cagcgattacgagatcaaatcaaatcctggattgcctcggccgagatcaaggataagagc
tctctgcttgaaaatcgaaggctcattgaaacgcaaatggaacgcttcaaggtggtcgag
cgcgagacaaaaacaaaggcttactccaaggaaggcttgggcgccgcacaaaaaatggat
ccagcccagcggatcaaagacgatgcgcgaaattggttaaccagctcaataagctcactg
caaatacaaattgatcaatacgaaagcgaaattgagtctctgctggcgggtaaaaagaaa
cgattagaccgggataagcaggagcgcatggacgacctgcgggccaagttggacaggcat
aaatttcacataacaaagctggaaactctgcttcggttgctcgacaacgacggcgtcgaa
gcggatcaagtgaacaagatcaaagacgatgtcgaatattacattgattcgtcgcaagag
cctgacttcgaggagaatgagttcatctacgacgacatcattggcctggacgaggtggag
ctcagcgggacggcgacaacggacagcaacaatagcaacgaaaccagcgggtcccctagc
agtgttacctccggaggcagtccatcccaatcgcccgtcacagtacaacaagtgctgccg
gcatccgtgcaggcggcagcgaatactggtagcagcgcggccagcgctgccttgttccag
cagcaacaggcagcggcccagtcgaatggcagcaatgtgggatatgcgagcgataccagc
gcggcctcatcttcggcgacaacgtcgacggatccggcgggcagcgcggccaccttaagc
gggggcggaggcggcggcagcggcgataaacgcaacaaaagcagcgaaagcaataccatc
agcaaatcgaaaccacaaccccagcagatcatcaagcccacgcccgttcgtgcgacggcc
aaggtggctccgggtagtgaaactcaagtcaagattgtcagctcaacgcccagcaaaaac
cagcagctgcccacggctgcagcggtggtagctgcctccaactcagccccgagcagcagt
agtggcaacggtagcggcaacggcagtggaagctctagtgtgagcgcaggcacgggggcg
gccgcaccaacagccagtggtcacaatcctgccgtacaaccgcatgccccaacgcctggc
ctaactgccgccagcatcgctgctgcagctgccgcagcagtcgtctcaagttctgctaca
ccagcgattgcaagtatcagcaacgttcaaggccaatctgtgattcaagcaacaccaaca
attgcatttgcggcggtggcaaaacacaacacatcactcctggaaaacggtcctgtactg
caacagcagcccatatccacaacggtagccgccattgtgggagccggcgcacagacccaa
cagccacaacaccagcagcaacagccggcacaattatccaatcttcaaacaaattcctca
cacttgcaaaacggtctacctgtctcggtcagtagtagtgacagcaatagcaatgtcgtt
gatgcaatttcattgaaaaccatggcccaggaagccatcaatcgatccgcgatcgatgta
aattcgctaagccagcagccgcagacgcagcagcagcaaagcaacattgacacgaggcag
cagcagtcgcagcaatcactcctacaacagcattttagtacggaaaatactgccaaccag
ccgcagcaagtggcgtcccaacagcagcaaaatgcagctgcagctgcagccgcagccgca
gctgctgctgcggcagcggctgcaatgggaacaattgcggctgcagcacatgccgcggca
gccagcaatggatccacaactggcagtgggctcatgaatctggcaaatgctgcgggtcag
ccaaccagcggtagtgccaagacgcatacttcccaacagcaaatggccacaacggaagcc
cacattccgactctgctgggagtaacgccgttggggccaacgccacttcagaaagaacat
caggtgcagtttcaaatgatggaggccgcctactatcacctgccacagcccatggatacg
gagaagctacaaacgtatttccatcgcgcccctgtccccactccagcgcactatccccag
gcacagctgccaatatacgatactgttgaattttatcaacgactctcaacggagacgctg
ttctttgtattctactacatggaaggctccaaagcccaatatctggccgcaaaggcactg
aaaaagcaaagctggcgattccacaccaagtacatgatgtggtttcaacggcacgaggag
cccaagattatcaacgatgattacgaacagggtacgtacatctattttgactatgaaaag
tggagtcagcgaaagaaggagggattcacctttgaatacaagtacttagaagacaaggag
ctcaattga
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