Drosophila pseudoobscura: 4816371
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Entry
4816371 CDS
T01032
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X2
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
4816371
03036 Chromosome and associated proteins [BR:
dpo03036
]
4816371
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
4816371
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
4816371
SLIK complex
4816371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
SLIDE
PaRep2b
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
4816371
NCBI-ProteinID:
XP_001356144
UniProt:
A0A6I8UIR1
LinkDB
All DBs
Position
4:complement(5340648..5349195)
Genome browser
AA seq
1943 aa
AA seq
DB search
MSQALNESANSIGSDEQDDPRDEANGTDNSGSGSGSGSSGSDSDSDSSSGNSSDGRSSPE
PNVKPSSTSVAGFPPTAAAAQADSKTNGFTDDQEESSSGGSSGSDSDSEPEETRTGADHT
ATGGKLSANTSTSTTNSSSSSSKQQQDEEEDEDDDDDDDKETETVQQQKEQEPAADSEAS
ADDDASDSSPNASPTSSSSSSEDEEEDYRPKRTRQARKPPTAAPDKSKRAPPHKKKKKTW
DSDESDESDESDEESSAPKRKPAPATTSRNKPVPQQQQRRRVKSFSSDDSDDDDASKRCA
TRRTGAAVSYKEASEDEATDSEDLLECEYDEIQAAASAAAAVEDEKCETIERILAQRMGR
RGCTGNKTTIYAIEDPHAKVEEVEKVAEAEEDLPKEEEEQYLIKWKGWSYIHNTWESERT
LRDMKAKGMKKLDNFIKKEQETAYWRRYAGPEDIDYFECQQELQHELLKSYNNVDRIIAK
GSKPDVGTDEFLCKWQSLPYAEATWEDATLVLRKWQRCAEQFHDRESSKCTPSRHCRVLK
YRPKFSRIKNQPDYLVAGLVLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFL
YSLFKVHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSREMIQQYEWQFEG
SKRLKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLL
ITGTPLQNSLKELWALLHFIMPEKFDTWDNFELQHGNAEDKGYTRLHQQLEPYILRRVKK
DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKKGSTSTFLNIVIELKKCCN
HAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV
LADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTV
IIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQR
MDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDEPEHDEHELVCDIDEILR
RAETRNDDPEMPGDDLLSAFKVASIAAFEEEPSESNKQDVDAGDDAEDDSKDWDDIIPEG
FRKVIEDQEKAKEIEDLYLPPRRKTAAANQSESKRGAGGKAGRSKQADDSGDSEYELGSD
ASGDEGRPRKRGRPTMKEKITGFTDAELRRFIRSYKKFPAPLHRLEAIACDAELQEKPLT
ELKRLGEMLHDRCVQFLDEHKEEEIKTVQDDTPGAKQRRARATYSVKLGGVSFNAKKLLT
SEQELQPLSEIIPSGAAERQQWTFNIKTRAPVFDVEWGNEEDTKLLCGIYQYGIGSWEQM
KLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKIIKKNVELTKKGGQKRQRRPRAARIN
AESKAGNNSNNHSATSGAMAESKTLGEAEETVDGGRGALDNSSSHLDPSSTASPHLTPAS
EVSGGGTAQRTKKSKARSKKTSASDNNGNKPMHFTANNEPRALEVLGDLDPSIFNECKEK
MRPVKKALKALDQPDLSLSDQDQLQHTRDCLLQIGRQIDVCLQPYGESEKKEWRSNLWYF
VSKFTELDAKHLFKIYKHALKQQLSRESGGKGKSRAGSKEDSVSPSKIRRNGLPAEKDKD
RERDKSGKKKRKDKDKERAGQSRYSDGGTPSSGRFVNDSPLKRKRDENDVDGGSSAGGIV
AIVGGGISDHLKSMSFKRLNMERHEERKKHHRSSEYYGSSGAAPTGSCYEGSSSARRAGL
NSPSTPNSRSARSGGGYEALPAPSGYTPELERWHARERYSLEYKRDRYEVGYPRSGGPPG
GYHRDHRERDRDRRPDKRRYPPHLPPHAYPSHYLPTNYYMPNGIVPALPHPPGYRSDPRG
YPMMPRDYPADYRRSDYERRTQT
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcactcaatgaatcggcgaatagtattggctcagacgaacaagatgacccc
cgtgatgaggcaaacggcacggataacagtggcagtggcagcggcagtggctcctccgga
tccgactctgattcggatagttcgtcgggaaattccagcgatggacgaagctctccggag
ccgaatgtcaaaccatcaagcacatcggtggcgggttttccaccaacagcagcagctgca
caggcggacagtaaaacgaatggcttcacagatgatcaggaggagagttccagtggcgga
tcaagtggcagcgactccgattcggagccggaggaaaccagaacaggagcagaccataca
gcaacaggcggcaagctcagcgcgaacacgagcacgagcaccaccaacagcagcagcagt
tcatcaaagcagcagcaggacgaggaggaagacgaagatgacgacgacgatgacgacaaa
gagactgaaactgtacagcaacagaaggagcaagagccggcggctgacagtgaagcctcc
gccgatgatgatgccagtgatagttctccaaatgcatcgcccacatcctcaagcagcagc
agcgaggatgaggaggaggactatagacccaaacgaacgcgccaggcgcgcaagccccca
accgccgcacccgataaatcgaagcgagcgccgccacacaagaagaaaaagaaaacctgg
gactcggacgaaagcgatgagagtgacgagagcgatgaagagtcatccgcccctaagcgc
aagccggcgccagccactacctctaggaataaaccagtgccacagcagcaacagcgacgt
cgggtgaagtcctttagctccgatgacagcgacgatgatgatgccagcaagcgctgcgcc
acgcgtaggactggagccgcggtaagctacaaggaggcatctgaagatgaggccacggac
tcggaggatctgctggagtgcgaatacgacgagatccaggcggcggcatcggcggccgct
gccgtggaggacgagaaatgtgagaccatcgagcgaatcctggcacagcggatgggcagg
aggggctgtacgggcaataagaccacgatatatgccatcgaagatccccatgcgaaagtg
gaagaggtggaaaaggtggcagaggcggaggaagatttaccaaaggaggaggaggagcaa
tatctgatcaagtggaagggctggtcgtatatccacaacacatgggagtcggagcgtacg
ctgcgcgacatgaaggccaagggcatgaagaagttggacaacttcatcaagaaggaacag
gagactgcctactggcgccgctatgcgggacccgaagacatcgactactttgagtgccag
caggagctgcagcacgagctgctcaagtcttacaacaacgtggacaggatcattgcgaag
ggatccaagccagatgtcggtaccgatgagttcctatgcaaatggcaatcgttgccctat
gccgaggctacctgggaggatgccacgctggtgctgcgcaagtggcagcgctgtgccgag
cagttccatgacagggagtcttccaagtgcacaccctcgcgtcactgccgtgtcctcaag
tatcgccccaaattctcgcgcatcaagaatcagcccgactacctggtggcgggtttggtg
ctcagggactatcagatggacggactcaactggctgctgcactcgtggtgcaaagagaac
tccgtcattctggccgatgagatgggcttgggcaagacaatacagacgatatgcttcctc
tactccctgttcaaggtgcaccacctgtacgggcccttcctctgtgtggtaccgcttagc
acaatgactgcctggcagcgggagttcgacctgtgggcgccggacatgaacgtggtcacc
tatctgggggacatcaagtcgcgcgagatgatccagcagtacgaatggcaattcgagggc
tccaaaagactgaaattcaactgcatcctgaccacatatgagattgtccttaaggacaag
cagtttctgggcaccctgcagtgggcagcgttgctggtggatgaggcgcatcgcctcaag
aacgacgactcgctgctgtataagtcgctcaaggaattcgacacaaatcatcgactgcta
atcacgggcacgcccctgcagaactctctgaaggagctgtgggccctgctgcacttcata
atgcccgagaagttcgacacgtgggacaactttgagctgcagcacggcaatgccgaggac
aagggctacacccgactgcaccagcagctggagccgtatatcctgaggcgggtgaagaag
gatgtggaaaagtcgctgccagccaaagtggaacagattctgagggtcgagatgacctcg
ttgcagaagcaatactacaaatggattctgaccaagaactttgatgcgttgcggaagggc
aagaagggctccacctccaccttcctgaacatagtcattgagctaaagaagtgctgcaat
cacgcggccttgatcaggccctcggaatttgagctgatgggcctgcagcaggacgaggct
ctgcagacgctgctcaaaggctcgggcaagctggttttgttggacaagctgctctgccga
ctgaaggagacgggccatcgggtactcatattctcgcagatggttcgaatgctggacgtc
ctggccgactacctccagaagcgacactttccctttcagcgcctcgatggcagcattaag
ggggagatgcgtcgccaggcgctcgaccatttcaatgccgagggcagccaagacttttgc
tttctgctgtccaccagggccggtggcctcggcattaatctggccacagccgacacagtc
ataattttcgactcggactggaatccccaaaatgatctgcaagcccaggcacgagcccat
cgcattggccaaaagaatcaagtgaatatatatcgcctggtcacggccagatccgttgag
gagcagattgtggagagggccaagcagaagatggtcttggaccacctagtcatccagcgg
atggacaccacgggtcgcacggtgctggataaaagtggcaacggccactcctcgaactcc
aatccgttcaacaaggatgatctctccgccatactgaagtttggcgccgaggaactgttc
aaggacgagccggagcacgacgaacatgaactggtctgcgacattgatgagatcctgcgg
cgggctgagacccggaacgatgatccggagatgccgggcgatgatcttctgtccgccttc
aaggtggctagcatagcagccttcgaggaggagccgagtgaatcgaacaaacaagatgtg
gacgccggcgacgatgcggaggacgacagcaaggactgggatgacattattcccgagggc
tttcgcaaggtcatcgaggatcaggagaaggccaaagaaattgaggatctctatctaccg
cctagaagaaagacggcggcggccaatcaaagcgagtccaagcgtggagccggcggcaag
gccgggcggtccaagcaggcggacgactctggcgactccgagtacgagctgggctccgat
gccagtggggatgagggtcgtccccgcaagcgtggacgtcccacaatgaaggagaaaatc
actggcttcaccgatgctgagctgcgtcgcttcattcgcagctacaagaagtttcccgcc
cccctacaccgcctggaggccattgcgtgcgatgcagagctgcaggagaagcccctcaca
gagctgaagagactcggcgaaatgctgcacgaccggtgcgtccagttcctagacgagcat
aaggaggaagaaattaagactgtgcaggacgacacgccgggggcaaagcagcggcgcgca
cgggccacctactctgtgaagctcgggggcgtctccttcaatgccaagaaactgctgaca
tctgagcaagagctgcagccccttagcgagatcatacccagtggggcggcggagaggcag
cagtggacattcaacatcaagacgcgggcgccagttttcgatgtggaatggggcaacgag
gaggacaccaaactgctgtgcggcatttatcagtatgggatcgggtcgtgggagcaaatg
aagctggatcccaccctgaaacttaccgacaagatcctgctgaacgacacccgcaagccg
caggccaagcaacttcagacccgagccgagtacttgctcaagatcatcaagaagaatgtg
gagctgacgaagaagggcggtcagaagcgccaacgacggcccagagctgcacgaatcaac
gcagagtcaaaggccggcaacaactccaacaaccatagcgccacatctggcgctatggcc
gagagcaagacgttgggcgaggccgaggaaactgttgacgggggtcggggggcactggat
aatagttccagccacttggatccctcctccacagcttcgccgcacctgactccagcctct
gaagtgagcggcggcggcactgcccaaaggactaaaaagtctaaggccaggtcgaagaaa
actagcgcctcggacaataatggcaacaagcccatgcactttacggccaataacgagccg
cgggccttggaggtcctgggcgatttagatcccagcattttcaacgaatgcaaggagaag
atgcgtccagtcaagaaggccttaaaagccctggatcaacccgatttgagtctgtccgat
caggatcagctgcaacacacgagggactgcctgctacagatcggaaggcagattgatgtg
tgtctgcagccgtatggcgagtcggagaaaaaggagtggcgcagcaatctgtggtacttt
gtgtccaagttcacggagctggatgccaagcatctgttcaagatctacaagcatgccctc
aagcaacagctcagtcgggagtcgggtggcaagggaaagagcagggctggctccaaggag
gattcggtcagtcccagcaagatccgacgcaatggtcttccagcggaaaaggacaaagac
agggagcgagacaagagcggcaagaagaagcggaaagacaaggacaaggaacgtgcgggc
cagtcgcgttactcggatggcggtaccccgtcttcgggtcgctttgtcaacgactcacca
ctcaaaagaaagcgggatgagaacgatgtggacggcggtagcagtgcgggcggcatcgtg
gccattgttggcggcggcatcagcgaccatctcaagtcaatgtccttcaagcgtctaaac
atggagcgtcacgaggagcgtaagaagcatcaccgcagcagcgaatactatggcagcagt
ggagctgctccgacgggcagctgctacgaaggcagcagcagtgctcgcagagcgggcctg
aactctccatccacgccgaacagccgcagtgctcgtagtggaggtggttacgaggcactg
cctgctccgtcgggctatacgccggaactggagcgttggcacgccagagaacggtatagc
ttggagtataagcgcgatcgctatgaagtcggttatcctcgcagcggcggacctcccggg
ggctaccatcgggatcaccgcgaacgtgatcgcgaccgtcggcccgataagcgaagatat
cctcctcacctgccgccgcacgcctacccgagtcactatctgccgaccaattattatatg
ccgaatgggatcgtgcccgctttacctcacccgccaggataccgcagcgatccgcgtggg
tatcccatgatgccacgcgactatcctgccgattatcgacgcagcgactacgagcgacgt
acgcagacgtga
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