Drosophila pseudoobscura: 4816636
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Entry
4816636 CDS
T01032
Name
(RefSeq) recombination repair protein 1 isoform X2
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4816636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpo03400
]
4816636
Enzymes [BR:
dpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
4816636
DNA repair and recombination proteins [BR:
dpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
4816636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
4816636
NCBI-ProteinID:
XP_001356149
UniProt:
A0A6I8UIR6
LinkDB
All DBs
Position
4:complement(5330229..5332742)
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AA seq
648 aa
AA seq
DB search
MPRSKATKKPVEEALELPDATTNGSVVKEKAGTTDADAKVLTKGKPRAKKTSKKTAAENP
EPDHDENSQQYKEEEENAEKVPKASKGRPPKNANEEPAPKSSGAVSSRAKKEKQPAAEKL
EEPATSKGRAKRGKAAAVEESAPKETKARGRKRKDPSEDANAVVEEAEPPKQRTKKEQPP
LIAPEPAQKGKENKAETQAKRPRVNKRLADSEIAEVLEEEELAQEPPKATNKRTKKAKAG
ENGVRAEPVPVGDSKTSELTEEATADAVPTKATNKRTKKSKETEPVLPSEPMQAAKPTKQ
RAKREVREEPEPATSKKRAQKATAKKENEELAEPAESKPVRGRKKAATATKSEAAEDDAV
DGSKTSKTKKVEKAGEAKVNLDKADFALPAEKVFNFKISSWNVAGLRAWLKKDGLQSLAL
EEPDIFCLQETKCSNDQLPEELTHVPGYHPYWLCMPGGYAGVAIYSKIMPINVEYGIGNE
EFDDVGRMITAEYEKFYLINVYVPNSGRKLVNLEARMRWEKLFHSYVQKLDALKAVVICG
DMNVSHNEIDLENPKTNTKNAGFTKEERDKMTELLGLGFVDTFRHLYPDKKGAYTYWTYM
SNARARNVGWRLDYCIVSERFVPRVVDHVIRKQLLGSDHCPITVFLNI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctccaaggccacaaaaaaaccagtagaggaggcgctagagctccctgatgct
acaacaaatggaagtgtcgttaaagaaaaagccggtactacagatgctgatgccaaagtt
ctgacgaaggggaagccacgcgcaaaaaaaacatcgaagaaaactgcagccgaaaaccca
gagccagaccacgatgaaaactcgcagcagtacaaggaggaagaggagaacgccgaaaaa
gtgccaaaggcttcgaaagggcgtcctccgaagaatgcaaatgaagaaccggccccaaaa
tctagcggagcagtcagttctcgggccaaaaaggaaaaacagcctgctgctgaaaaattg
gaagaaccagcaacgtccaagggacgtgccaagagaggaaaagcggcagctgtcgaggaa
tcggctccgaaggaaacaaaagcccggggacgtaagaggaaggacccttcagaagacgct
aatgcggtggtagaagaagcagaaccgccaaaacaacgaacaaaaaaagaacaaccaccc
ttgatcgcaccagagccagcgcagaagggaaaggaaaataaagctgagacacaagccaaa
cggccccgagttaacaagcgtctggcagattcggaaatagccgaggttcttgaggaagaa
gaattggctcaagagccgccaaaggctactaataagcgaactaagaaagcgaaagctggt
gaaaacggtgtccgagctgagcctgtgccagtaggggactcgaagacttctgagctcacg
gaggaagcaacagcagatgctgtccccacgaaggccaccaacaagagaactaaaaaatca
aaagaaaccgaacctgtgctgccatctgagcctatgcaggcagcaaagccaactaagcag
agagccaaaagggaagtcagggaggaacccgaaccagcaaccagcaaaaaacgggctcag
aaggccaccgctaaaaaggagaacgaggagttagcagagcctgcagaaagcaagccagtt
cgcggtcgaaaaaaagccgccaccgccaccaaatctgaagctgctgaagatgatgcggtt
gatgggtcgaaaacatccaagaccaaaaaagtggagaaggcaggagaagccaaagtaaac
ttggataaagctgactttgccctgccagccgaaaaggtattcaattttaaaatctctagc
tggaacgtagctgggctaagggcatggctcaagaaggacggtcttcagagtttggctctc
gaggagccagacatattttgtctgcaagaaacaaagtgctcaaatgatcaactgcccgaa
gaactgacacacgtgccgggctatcatccgtactggttgtgcatgccaggtggctatgct
ggggtggccatatacagcaaaattatgcccattaatgtcgagtacggcattggaaacgag
gagtttgatgatgtgggacgcatgataacagcggagtatgaaaagttctatttgataaat
gtctatgtccccaattcgggtcgcaagctggttaacttggaggctcgcatgcgctgggag
aaacttttccattcctatgtgcagaagctcgacgctttgaaggcggtcgtcatctgtggg
gacatgaatgtgtcccataacgaaatcgatttggaaaatcccaagacgaacaccaaaaat
gctggcttcaccaaagaggagcgcgataagatgactgagctgcttgggctaggattcgtg
gatacattcaggcacttgtatcccgacaaaaagggagcctacacatactggacttacatg
tccaacgcacgcgctcgcaatgtagggtggcgtctcgactactgcattgtctccgaacga
tttgtcccgcgggtagtagaccatgtgatccgaaagcagctccttggaagcgatcattgc
ccaattactgtattcctaaatatttag
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