KEGG   Drosophila pseudoobscura: 4816708
Entry
4816708           CDS       T01032                                 
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
  KO
K08735  DNA mismatch repair protein MSH2
Organism
dpo  Drosophila pseudoobscura
Pathway
dpo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    4816708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpo03400]
    4816708
DNA repair and recombination proteins [BR:dpo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     4816708
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I FAM184 AAA_27 DUF1802
Other DBs
NCBI-GeneID: 4816708
NCBI-ProteinID: XP_001356195
UniProt: Q29KC0
LinkDB
Position
4:4318035..4321729
AA seq 914 aa
MQAKATESRREPTLHMDTNARRNFIKYHAKLGEKPSTTVRFYDHSDCYTVNGSDDCELVA
KIVYKSTAFIGALLPDDKETLQFVALSKGNFEMAVRELLLVRNLRVEVYVKRNEWQLEYR
GSPGNLLQFEDILFANKEVLVGNNMISLQVKLEGGAQRRVGVASVEQNDCQFQLLEFLDD
DFFTELEATVVLLGPKECLLPSVEGEYVPVKALLERNGVMITVPKKSSANDLLQDLNRLL
RFAKGQQEDATGLKELQMLLASESLKVAIKYLDLVNDAGNLGHYEIKQLDLKRFVHLDSA
AVGALNIMPKPGTHPSMPSYRWQSILGVLDHCRTPQGHRLMGKWVKQPLRSQEILNDRHN
IVECLLESSDTLESLSLDYLKRIPDILMLTKKLMRRKATLQDLFRIYQVILRTPKIVQVL
LSLENSTVESVICSPFKSFLEDLTGLKQMVEQVVDFEAIERGEYLVKSSFDSRLMELQQT
MNELYDKMERLKSKCNDELDLDSKQIKLENVAKLGYHFRTTLKDDSVLRKNKNYRIVDVI
KGGVRFTSDKLEGYADEFASCHSRYEEQQLSIVEEIIQVAVGYAAPLTSLNNELAQLDCL
VSFAIAARSAPTPYVRPNMLAEGAGKLVLTDVRHPCLELQEHVSFIANSVYFKKDKCNMF
IITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCGMATISMVDSILGRVGASDNIIKGLSTF
MVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFH
EITKLAETLPTVKNCHMAALADADNFTLLYQVRPGVMEKSFGIQVARLANFPEDVVQNAQ
EVYNEFEDEHADKKNQEDKALLEKIQVAIQQLSTAGNNTEINVEDLTQLVTQFTQDIKQL
DSDYFKSVLASTEV
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgcaagccaaagcaactgaaagccgtcgggagccaacgctgcacatggacacaaatgcg
cgtcgcaatttcataaagtaccatgccaagctcggcgagaaacccagcaccacagttcgc
ttttacgatcactcggactgctatacggttaacggcagcgatgactgcgagctcgtggct
aagattgtctacaagtccaccgcgtttattggggccctgctgcccgacgacaaggagact
ctgcagttcgtggccctgtcaaagggtaactttgagatggcagtgcgggagctgctcctg
gtgaggaatttgcgcgttgaggtctacgtgaagcgtaatgaatggcagctggagtaccgc
gggtctccgggcaatctgctacagttcgaggacatcttgtttgccaacaaggaggtctta
gtgggcaacaacatgatctcacttcaggtcaaactcgagggtggcgcccagcgacgcgtg
ggtgtagccagtgtggagcagaatgattgtcagttccaattgctcgagtttctagacgat
gacttctttacggagctggaggctactgttgtcctcttggggccgaaggagtgtttacta
ccctcggtagaaggagaatatgtgccagtcaaagctttgctggagcggaatggtgtgatg
attactgtgcccaagaagagcagcgccaacgatctcttgcaggacctgaatcgtttgttg
cgattcgccaaaggtcagcaagaggatgccaccgggctgaaggagctgcaaatgctgctg
gcttcggaatccctaaaggtggccataaagtacttggacttggtcaacgacgctggcaac
ttgggacactacgaaatcaagcaactagatctaaagcgatttgtccatttggactcggct
gctgtaggtgccttaaacattatgcccaagccggggactcatccgtccatgccctcgtat
cgctggcaaagcattttgggtgtcctggatcactgcagaactccacagggccaccgactc
atgggaaagtgggtgaaacaaccactgcgtagccaggagattctaaacgaccgtcataac
atcgttgagtgtcttttggagtcgtcagataccctcgagagccttagcttagattatcta
aagcgcattccagacattctgatgctgacgaagaagttgatgcgtcgcaaagccacgttg
caggacctgtttcgcatctatcaggtcatattacgaactcccaagattgtgcaggttctg
cttagtcttgagaactcgacggtcgagagtgtgatttgctctccctttaaaagcttccta
gaggatctaaccgggctcaagcagatggtcgagcaagtagtcgactttgaggcaatcgaa
aggggagagtacctggtcaaatcctccttcgacagccgcctgatggagctccagcagacg
atgaatgagttgtacgacaaaatggagcgcctgaagtccaaatgcaacgatgaactggat
ctggacagcaagcagatcaagctggagaatgtggccaagttgggataccatttccgtaca
accctgaaggatgactctgtgcttcgcaagaataaaaactatcgcatcgtagacgtgatc
aagggcggtgtgcgcttcacctccgacaaactggagggctatgccgatgagtttgccagc
tgtcacagtcgctacgaggaacagcaactatcgatcgttgaggagatcatacaggtcgct
gtaggctacgctgctccattgacctctcttaacaatgaactggcccagctggactgtttg
gtcagcttcgccatcgccgcccgcagtgctcccactccctatgtccgtcccaacatgcta
gcagaaggagctgggaaactggttctgacggatgtgcgtcatccctgcctggagctgcaa
gaacatgttagcttcatagccaacagtgtttacttcaagaaggacaaatgcaacatgttc
atcatcacgggccccaacatgggcggaaagagcacatacatacgctcagttgggactgcc
gtactgatggcccatgttggtgcctttgtgccttgcggcatggccaccatcagtatggtg
gattcaattctgggtcgtgtgggagccagcgacaatattataaagggcttaagtactttc
atggtggagatgattgagacttcgggtattataaggactgctactgacaagtctttggtc
attatcgacgagttgggacgcggaacatcgacctacgagggatgtgggattgcctggtca
attgccgagcatttggccaaggaaaccaaatgcttcacgctcttcgccacccacttccat
gagattaccaagctggccgagactttgccaacagtaaaaaactgtcacatggctgcgttg
gccgacgccgacaactttacgctgctctaccaggtacgtcctggtgtgatggagaagagc
tttgggattcaggtggcccgtctcgcaaacttccccgaggatgtggtgcagaatgcccag
gaggtatacaatgagtttgaggacgagcatgcagacaaaaagaaccaggaagacaaggca
ttgcttgagaagattcaggtcgccattcagcagctctcgacggctggcaacaatacggaa
ataaatgtagaggaccttactcagctggtcacacagtttacgcaggacatcaagcaacta
gacagcgactacttcaagtctgttttggcctccaccgaggtttag

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