Drosophila pseudoobscura: 4816845
Help
Entry
4816845 CDS
T01032
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4816845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4816845
03012 Translation factors [BR:
dpo03012
]
4816845
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
4816845
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
4816845
Translation factors [BR:
dpo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
4816845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
NB-ARC
ABC_tran
Rad17
AAA_7
SRP54
TsaE
PhoH
AAA_16
Motif
Other DBs
NCBI-GeneID:
4816845
NCBI-ProteinID:
XP_001356858
UniProt:
A0A6I8UK85
LinkDB
All DBs
Position
4:25403194..25406946
Genome browser
AA seq
946 aa
AA seq
DB search
MDRDRDSDSHARKGNRPPGLKGKEIGMYYRDLGRQRAKEREKMKKDGGPDMIEQPKIRLG
CSVTVPRGALERVKEFMQAFNKTPRKSDSHSDVDAQFELQFRHLLSVNFHQFIAEKKQEN
NTLNYINQNLDTKLMEEHRERLQSPNMRERLHARQQLPAMKHAEEIIRAVQQNQVILIVG
STGCGKTTQVPQLLLDHSIVKGCASDCRIICTQPRRISAITIAERVSYERGENLGISVGY
QIRLESRRPRDRASITYCTTGVLLQQLQSDPLMHSLSVLILDEIHERSVETDLLMGLLKV
ILPHRPNLKVILMSATVREQDFCDYFENCPMFRIEGVMFPVRMLYLEDVLSLTNYQFENL
RTTKKKPNQERKESLMAHEAMILPYVRRVRHMYDRRVLDQLRLPESEGCEDIDFIADLVY
YICENEPEGAILVFLPGFDKISKLNKALENPQGSFKGQRWRQSLVLYPLHSLMPSVEQQA
VFRRPPAGKRKVIMSTIIAETSVTIDDVVYVINSGRTKASNYDIASNIQSLDEVWVSKAN
TQQRKGRAGRVRPGICYNLFSRAREDQMADIPTPDILRSKLESIILSLKLLHIDNPYEFL
GTLISAPEQEAIKNGVLLLMRMGALDKEGILTPLGVHLAKLPVDPQMGKMMLMSALFCCL
DPITSAAAALSYKSPFYTPLGLESRVDQVKRQMAHNMRSDHLMVHNTICSYRKSRGDRNF
CYTNYLSYMTLQQLERMKNQFAELLCNYKFLSSPGLLDKSSNINSDKIPLLRAIIGAGLY
PNMAYMRKTRRIRNSVRAVHNMSTDDGKRVNFHPSSVNSGESSFDSDYFVYYQRQKSSSL
YLLDSTMVFPMALIIFGDGVEAGVKDRVPYLSVANTYFFKCNPETAKVVLELRTNLGRLL
LKKALCPAPIEENGEEKQLIKAIELLLSLDEKLDDDSFSSDEIDDI
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgatcgcgattccgactcccatgcccgcaagggcaatcgtccgcccgggctg
aagggcaaggaaattggcatgtattaccgcgacctcggtcgccagcgcgcgaaggagcgc
gagaaaatgaaaaaggatggcgggccggacatgattgagcagccaaaaatccggctggga
tgcagtgtcactgtgccacgaggcgcgctggagcgcgtcaaggaattcatgcaggccttc
aacaagacgcccaggaaatccgactcgcactcggatgtggatgcgcaattcgagctgcag
tttcgtcacttgctgagcgtcaatttccaccagtttattgccgagaaaaagcaggagaac
aacactttgaactacatcaaccagaatttggatacgaaattaatggaggagcatcgagag
cgcctccagtcaccaaatatgcgcgagcgtctgcacgcacgtcagcagctgccggccatg
aagcatgcggaggagattatacgcgccgtccagcagaatcaagtcattctcattgtcggc
agcaccggctgtggtaagaccacacaggtccctcaactgctgctcgatcacagcattgtc
aagggctgtgcctcagactgccgcattatttgcactcaaccgcgtcgtatttcggccatc
acgattgccgagcgagtgagctacgagcgtggcgagaacctgggcatctccgtgggctat
cagatacgcctggagagccgccggccaagggaccgggcctccattacgtattgcacaacg
ggagtgctgttgcagcagctccagtcggatcccctgatgcacagcctcagtgtgctcatt
ctggacgagatacacgagcgcagcgtggagacggaccttctaatgggcctgctgaaggtc
atcctgccgcacaggcccaacctgaaggtgattctgatgagtgccaccgttcgagagcag
gatttctgtgactactttgagaactgccccatgttccgcattgagggggtgatgtttccc
gtccggatgctctacctggaggatgtcctctccctcaccaactatcagttcgaaaatttg
cgcacaacgaaaaaaaaaccgaatcaggagcgtaaggagtccttgatggcgcacgaagcc
atgatcctgccgtatgtgcgtcgcgtccgtcacatgtacgatcgaagggttctcgaccaa
ttgcgcctgcccgagtcggagggctgcgaggacattgatttcatcgcggatctggtctac
tacatctgcgaaaacgagccagagggtgccattctggtcttcctgcccggcttcgacaag
atctccaaacttaacaaagctctggagaacccccagggttcgttcaagggccaacgctgg
cgccaaagtctagtcctttatcccctgcactccctgatgccctccgtcgagcagcaggcg
gtgttccgtcgtcctccggccggcaagcgtaaggttattatgtccaccattatagccgag
acatcggtgaccattgatgatgtggtgtatgtcatcaactccggccgcaccaaggctagc
aactatgacattgccagcaacatccagagcctggacgaagtgtgggtgagcaaggcaaat
acccagcagcgcaagggtcgtgcaggacgtgtaaggccgggcatctgctacaatctgttc
agtcgggccagggaggatcagatggccgatatacccacaccggatatactgcgctccaag
ctggagtcaatcattttgagcctgaaactgctgcacattgataatccctatgaatttctg
ggcactctcatcagtgcccccgaacaggaggccatcaaaaacggtgttcttctcctgatg
cgcatgggtgccctggacaaagagggcattcttacaccgctgggcgtgcatttggcgaag
cttcccgtcgatccgcaaatgggcaaaatgatgctcatgtcagccctattctgttgcctg
gatcccatcacctcggcggcagcggcactctcatacaagtcgccgttctacacgcccttg
gggctggagagccgtgtggatcaggtgaaacggcagatggcccacaacatgcgcagcgat
catctgatggtgcacaacacaatttgttcgtatcgtaagagtcgtggtgatcgcaacttc
tgctatacgaattatttgagctacatgacgctgcagcagctggagcgcatgaagaatcag
tttgcagaactgctgtgcaactacaaatttcttagttcacccggcttactagacaagtca
tccaacattaattcggacaagattcctcttctgagggctattattggagccggtctctat
ccgaatatggcatacatgcgcaaaacacgtcgcatacggaattcagtgcgtgctgttcat
aacatgtccacggacgacggcaagcgtgtgaattttcatccttcgtccgtgaacagcggg
gaatccagctttgattcggattatttcgtgtattaccagcgacagaagtcctcatcgctg
tatttactcgattccacaatggtctttcccatggctctcattattttcggcgatggcgtc
gaggcgggtgtcaaagacagagtgccctacctatccgtggccaatacatacttttttaaa
tgcaatccagagactgccaaagtggtgcttgagctgcgcacaaatctgggtagattgctg
ctgaaaaaggctctctgtccggcccccatcgaagagaatggcgaagagaagcaattgatc
aaagcaattgagttgctgctttcattggacgagaaattggatgacgattcgttttcgtcc
gacgaaatcgatgatatctga
DBGET
integrated database retrieval system
