Drosophila pseudoobscura: 4816990
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Entry
4816990 CDS
T01032
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4816990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
4816990
Spliceosome [BR:
dpo03041
]
Complex A
U1 snRNP components
U1 related factors
4816990
Complex B
4816990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
4816990
NCBI-ProteinID:
XP_001356833
UniProt:
Q29LZ7
LinkDB
All DBs
Position
4:complement(25108862..25112119)
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AA seq
810 aa
AA seq
DB search
MNVPPSAGNGAAAVGRGMGYTPPAAIVPQFPPPGFAAPPPPELAAAFGVMASNTEWTEHK
APDGRPYYYNQNTKQSSWEKPEALMTPAEQLHNQCPWKEYRSDTGKVYYHNVATKETCWE
PPPEYVDMKAKAKAEEAAAAAKAVAAMTSSSLTGLLPHVALASILPAALPADPRIPTPEI
HSPLTPSSNENSSSALDQAMAATLAAIEVPQPNAKKDEKSSDGSPLVFKDKREAIEAFKD
LLRDRNVPSNANWDQCVKIISKDPRYSAFKNLNERKQTFNAYKTQKVKDEREESRLKAKK
AKEDLEQFLMSSDKMNSQMKYFRCEEVFAGNRTWTVVPETDRRDIYEDCIFNLGKREKEE
ARVLKKRNMKVLGELLESMTSINHATTWSEAQVMLLDNAAFKNDVTLLGMDKEDALIVFE
EHIRTLEKEEEEEREREKKRMKRQQRKNRDSFLALLDSLHEEGKLTSMSLWVELYPIISA
DLRFSAMLGQSGSTPLDLFKFYVENLKARFHDERKIIREILKEKAFVVQAKTSFEDFATV
VCEDKRSASLDAGNVKLTYNSLLEKAEAIEKERMKEEVRRLRKLENEIKNEWLEANVSVA
ETYDSAKKLVEHLEAFAVYEKEIGVEKIWEDFIKESEDACSHHHSRSRKSKKNKKHKKRV
RSTSRSDIENELVEVEKSKRRRSKSRSHSLSSIGSIESEKLLKKKKKRKNKLRGSSCESD
LGGNLSPSLALLHTDSNSHSPAKKKKKEKRSKKDKEGKRHNRHNRSTSPLSPVQSMDSGG
SRNEELTLSDGELESKRAALLAQLNEQLDE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcctcctagcgctggcaatggagcagcagcggtcggcaggggaatgggatac
acgccgccggctgccatagtgccacaatttcccccgcccggctttgctgctcccccaccg
cccgaactggcagcggcattcggtgtgatggcctccaacacagagtggacagagcacaag
gccccagatggacgcccttattactacaatcaaaatacaaagcaaagttcgtgggagaaa
cccgaggctctgatgacgcccgccgaacagctgcacaatcagtgcccctggaaggaatac
cgctctgatacgggcaaagtgtattaccacaatgtggccactaaggagacttgctgggag
ccgccgccggaatatgtagacatgaaggcaaaggctaaggcggaggaagctgcagctgca
gccaaagcggtggcagccatgacatcctccagtttgacgggactgcttccgcatgttgca
ttggcaagtattttgccagctgctttgcccgcagacccaaggatacccacgcccgagatt
cattcgccgcttacgccgagcagtaacgagaactcatcatcggctctcgatcaggccatg
gcagccacattagccgccatcgaagtgccacaaccgaatgctaaaaaggatgaaaagtca
tcggatggcagtcctctggtgtttaaggacaagcgcgaggccatagaagcattcaaggac
ctactccgggaccgcaatgtgccctcaaatgccaattgggatcagtgtgtgaagataata
tcaaaggatccgcgctacagcgccttcaagaacctcaacgagcgcaagcaaacgttcaat
gcctacaagacgcagaaggtgaaggacgagcgagaagagtcgcggctgaaggccaaaaag
gcgaaagaggacctggaacaattccttatgtccagcgataagatgaactcccagatgaag
tatttccgctgtgaggaggtctttgcagggaatcggacatggaccgtagtgcctgaaacg
gatcgacgggatatctatgaggattgcatattcaatcttggcaaaagggagaaagaagag
gcgcgtgtcttgaagaagcgcaatatgaaggtgttgggcgagcttctggagtctatgaca
tccatcaatcatgccaccacctggtccgaagctcaggttatgctcctagacaatgccgca
ttcaaaaacgatgtgacccttttgggcatggacaaggaggatgctctaattgttttcgag
gagcacatacgcacgctggaaaaggaagaggaggaggaacgcgagcgggagaagaagcga
atgaagcgacagcagcgcaagaatcgagactcctttctggcactcctcgactcccttcac
gaagagggcaaactcacctccatgtcgctgtgggtggagctgtatcccatcatatccgcg
gacctacgcttctcggccatgctcggtcagagcggatcaacgcctttggatctgttcaag
ttctacgtggagaatctgaaggctcggttccatgacgaacggaaaatcatacgagagatt
ctcaaagaaaaggcatttgtggtgcaggccaagacatcattcgaggactttgccacggtg
gtgtgcgaggataaacgttcggccagcctggatgcaggcaacgtgaagctaacctataat
tctctgctagaaaaggcggaggccattgaaaaagagcgcatgaaggaagaggtgcgacga
ctgcgaaaactggagaatgaaattaaaaacgaatggctcgaggcgaatgtgtctgtggcc
gagacctatgacagcgccaagaagctggtggagcacttggaggcatttgctgtttacgag
aaggaaatcggtgttgagaaaatctgggaagacttcattaaggaaagcgaagatgcctgc
agccatcatcattcccggtcacgtaaatcgaaaaagaataagaagcacaaaaagcgagtg
agatctacatcaagatcggacattgaaaatgaactggttgaggtggaaaagtcaaaacga
aggcgatccaaatcccgttcccattcactgagctccattggcagcatcgagagcgaaaag
ctgctgaagaagaaaaagaaacgcaagaacaaactgcggggctcgtcatgtgagtcagat
ttaggtgggaatctgtcgcctagcctggcgctcctgcataccgattcaaactcgcattcg
ccagccaagaagaagaaaaaggaaaagcgttccaaaaaagacaaagaaggcaaacgacac
aacagacacaatcgttccacgtcaccactcagtcctgtccagtccatggattcgggaggc
tcacgtaacgaggaactaacgttaagcgacggcgaactggaatcaaagcgagcagcactc
cttgcacaactcaatgagcagctggacgaatga
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