Drosophila pseudoobscura: 4817260
Help
Entry
4817260 CDS
T01032
Name
(RefSeq) enhancer of mRNA-decapping protein 4 homolog isoform X2
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4817260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4817260
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
4817260
mRNA degradation factors
5'-3' decay
Decapping complex
4817260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_Prp19
WD40
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
4817260
NCBI-ProteinID:
XP_001356785
UniProt:
A0A6I8UK34
LinkDB
All DBs
Position
4:complement(24327340..24333282)
Genome browser
AA seq
1389 aa
AA seq
DB search
MLVALFALAQLPIFRKPTPPTPPPPSSSSRPQLSRCGKATKANTSAHLTSPTIFTISEMN
TNADQDQGHAIAANGNAADSNDIETIHFNPHEKQICRIIKTNHTKILASASVHTRGSSKV
KLKNIVDYKWERKYYYPGHLVAVHRDGKHLAYAINVNNKATGMEGMVRVCNISTSMRALI
KGMSGEVLDLQFAHTDRERILAVIDVSSLFVYKIDLIEGNLLCNLVLKVEDPIANYQPEY
DMVSWCPYVCNSSSAGAPGDDDDENQLLIWSRSRQFQVFHVKMIISEHGRGKINPTVLDA
GYLKIEEDSMITCAALSPDGTTVAAACADGLVRFYQIYFFDVRNPRCLHEWKPHDGKKVN
SLFFLDNINKPVEESYWQHVITTSDNNTEIKLWNCSLWECLQTINIVAALAVPGQFIAGI
DRSANYLVVSCLESLAVYVMQIGSVSGDAGDAGELSDGEGNDQRIQNVAEFKLSSGILSF
SIVNAAMRRLKSSVESYYPVEEPDDFDDENNSTYALVVHMFVVQAKSLQECHIIYQPCVP
EKTERKSLTNSSISSIPSKQRSETPEDNLLLLKKETTVSPNSGAGSGSVPLDALFAKSAK
RAAAASAGGSSSSAVVAMAVAAAAAPSAILQQAIDAATTIKSRSASPQFGSAYPQVNLMT
PDAFSASGTQSSSTATTAVVVATSTTTTTGTDSAGAGPVPAVTAATDAIDSQVLNTLRML
ATVTGGKAGENSNANILNLMNNTLIEDLEQQKIKDKFEARKKFIAIDRNPERNLAENLAS
GGSSPSREVQEIMATQEDADDAYEAELDNLDDDDDDDDDEEEEEELPNSSPLLEPVDTKW
LAETAKVKLVKKSAELQNAAQIMSQAVQHKNNGNVPPTLGGGSINSNSNNNTGTTLNTSN
SSSHNAGEGESTAGGNAELNDKIDLLLDLVKAQSKQLHKLENEVSKLQLQQQQTAAVAVA
AATAAQSTKSDTSLEPKNVNQLAYKIEMQLSKLMEQYLKRYENEHTKKLSEFLQARENQN
RELRESVVAVLNQYVLTHFTDIIGNVLNMELQRQLVPRVNAKMDQLQAQIQVEFVQKLGV
FEKAVKENIAQVCKSKQFIDSFGKSVLIGVQTSLQSAFIESMGSTLIPAYEKSSQNMFQQ
LHDAFTVGIKEFMVQFNAYLQQMPQQQGAGAGNWDELNNKLGLLKQLVESNLLKHRTELT
DAMLETQREVKSLEILLARQVQETIRAELRKFLENQNLAMRSQAATPAQSYDLRDNIKQL
LHAGQTNKAFHQALLANDLNLVEYTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISADMTN
HNELKQRYLNEALLAINMVDPITREHAPKVLSELYRNCQLFIKNCPKSTQCSNVRLLMKA
IMSYRDQLK
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcgcgctctttgcgctcgcacagttgccaatatttcgtaagccgacgccgccg
acaccgccacctccatcttcatcgtcgcgtccccaattgtcaaggtgtggcaaagcaaca
aaagcaaacacatccgcccatttaacatccccaacgatcttcacaatatccgagatgaac
accaacgctgaccaggatcagggccatgccatagccgccaatgggaatgccgccgactcc
aatgatattgaaacgattcatttcaatccgcacgagaagcaaatctgtcgcatcatcaaa
acgaatcataccaaaatcttggcatccgcctctgtccatacgcggggttcgtcaaaggtc
aagctaaagaacattgtcgactacaaatgggagcgcaaatactattatcctggccatttg
gtggccgtccatcgtgatggcaaacacctggcctatgctatcaacgtcaacaacaaggcc
accggcatggagggcatggtgcgtgtctgcaatatcagcaccagcatgcgtgcccttatc
aaaggtatgagcggcgaggtcttggatctgcagttcgcccacacagatcgggaacgtata
ctagctgtgatcgacgtgagctcccttttcgtatacaaaatcgatctgatcgaaggaaat
ctgctgtgcaatctggtgttgaaagtcgaggatcccattgccaactatcagcccgagtac
gatatggtctcctggtgtccgtatgtgtgcaatagctcgagtgcaggtgcccccggtgat
gatgatgatgagaatcagctattgatttggtcgcgcagccgacagtttcaggtctttcat
gtgaaaatgattatcagtgagcatgggcgtggcaagatcaatcctactgtcctggatgct
ggctatcttaagattgaggaggattcgatgatcacctgcgccgctctttcgcccgatggt
accacagtggccgccgcctgtgccgatggcctggtgcgtttctatcaaatctacttcttt
gatgtccgcaatccacgctgcctgcacgaatggaagccccacgatggcaagaaagtcaat
tcgttgtttttcctggacaacatcaacaagccagtggaggaatcctactggcagcacgta
atcaccaccagcgacaacaacacggaaatcaagctgtggaactgctcgttgtgggagtgc
ctgcagaccatcaatattgtggccgctctggccgtacccggacagtttattgctggcatc
gatcgaagtgccaattatttggtggtgtcctgcctggagagcctggctgtttatgtcatg
cagattggcagcgtcagcggtgatgcgggagatgcgggcgaactcagtgatggcgagggt
aacgatcagcgaatccaaaacgtggccgagttcaagctcagctcgggaatactctccttc
tcgattgtgaacgccgccatgcggcgtctgaagagctctgtggagagctactatcctgtg
gaggagccggacgactttgatgatgagaacaattccacatacgcgctggtggtgcacatg
tttgtcgtgcaggccaagagcctgcaggagtgccacatcatctaccagccgtgtgtgccc
gagaagactgaacgcaagagtctgactaacagcagcattagcagcattccgagcaagcag
cgttccgagacgcccgaagataatctgttgctcctcaaaaaggagacgactgtctcgccc
aacagtggagcaggttcaggcagtgttccactcgacgcactgtttgccaagtccgctaag
agagcagcggctgcctctgcgggtggcagcagctcttctgctgtggtggcaatggcggta
gctgctgccgccgcaccctcagccatcctccagcaggccatagacgctgcaacgaccatt
aaatcgagatccgcttcgccccagtttggcagcgcctatccgcaggtgaatcttatgaca
ccagatgcttttagtgcgagtggaacacagtccagcagcacagcgaccaccgctgtggtg
gtggccaccagcaccacaaccaccacagggactgattctgccggcgccggccccgtccca
gcggtgactgcggccaccgatgccattgactctcaggtcttgaatactctccgcatgctg
gccaccgtgacgggcggcaaagcaggcgaaaattccaatgcgaatatcctcaatttgatg
aacaataccctcatagaggatctcgaacagcaaaagatcaaagacaagtttgaggcgcgc
aaaaagttcattgccatcgaccggaatcccgagcgaaatctagccgagaacttggccagc
ggcggctcgagtcccagtcgtgaggtgcaggagattatggccacacaggaggatgccgat
gatgcctacgaggcggagctggataacctagacgacgacgacgacgacgatgatgatgaa
gaggaggaggaggagctgccaaactcgtcgcccctgctggagccggttgataccaaatgg
ctggcagagacggccaaggtgaagctcgtaaagaaatcggcagaactgcagaatgcagca
cagatcatgtcgcaggcggtgcagcacaagaacaatggcaacgtgccgccaacactaggc
ggtggcagcatcaatagcaacagcaacaacaacactggcacaactttgaacacgagcaac
agcagcagccacaatgctggcgagggcgagagcacggccggtggaaatgcagagctaaat
gataaaatcgatctgttattggatctggtcaaggcacaatctaagcaactgcacaagctg
gagaacgaggtgtccaagctacagctgcaacagcaacaaacggcggcagtggcagtggcg
gcagcaacagcagcacagtctaccaaaagcgatacctccttggagcccaagaatgtcaat
cagttggcatacaaaatcgaaatgcagctctccaagctaatggaacagtatctgaagcga
tacgagaacgagcacacaaagaagttgtccgagtttctgcaggcgcgcgagaaccagaat
cgtgaactccgggaatctgtggtggccgttctcaatcagtatgtgctcactcattttacg
gacatcattggcaacgtactaaacatggaactgcagcgtcaattggtgcccagggtgaat
gccaaaatggatcaactccaggcccaaatacaggtggagtttgtccaaaagttgggcgtc
tttgaaaaggctgtcaaggaaaatattgctcaagtatgcaagagcaagcaatttattgat
tccttcggcaagtcagtgctgataggtgtccaaaccagcctgcagtcagccttcatagag
tccatgggcagcactctgataccggcgtatgaaaagtcctcgcagaatatgttccagcag
ctacacgatgccttcactgtggggattaaggagttcatggtccaattcaatgcctacctg
cagcagatgccacagcaacaaggcgctggtgctggcaactgggatgagctcaataataag
ctcggccttttaaagcaattggtcgaaagtaatctgctcaagcatcgcaccgaactcacg
gacgccatgctggagacccagcgtgaggtcaagagcctggagattctattagcccgccag
gtgcaggagaccatacgagcggagctgcgcaagtttctggagaaccagaacttggccatg
cgctcgcaggcggccacaccagcgcaatcgtacgatttgagggacaacattaagcagctg
ctgcatgcggggcagacaaataaggcttttcaccaggcgctgctggccaacgatttgaat
ctggtggagtatacgctgcgacacacggacagcaaccaggcctttgccccagagggatgc
aggctagagcagaaagtcctgctgtcgctcattcagcaaatctccgctgacatgaccaat
cataatgagcttaaacagagatacctcaatgaggcgctgctggccatcaatatggtggat
cccattacccgcgagcacgcccccaaggtgctctccgagctgtaccgcaattgccagctg
ttcatcaagaattgtcccaagagcacgcagtgcagcaatgtccgactactcatgaaggcc
atcatgtcgtatcgggatcagctgaaatga
DBGET
integrated database retrieval system
