Drosophila pseudoobscura: 4817366
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Entry
4817366 CDS
T01032
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
4817366
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
4817366
Spliceosome [BR:
dpo03041
]
Complex C
Other components
Complex C specific factors
4817366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
AAA_19
nSTAND3
ABC_tran
AAA_30
ResIII
AAA_25
AAA_29
T2SSE
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
4817366
NCBI-ProteinID:
XP_015035993
UniProt:
A0A6I8V9F6
LinkDB
All DBs
Position
4:complement(21414290..21416684)
Genome browser
AA seq
680 aa
AA seq
DB search
MATFKPKFLKPDTDDTITDSGGGDQQSSAFVFNANHNLGLVEQRERLPIRQYRDQILYCL
EKHQVVILVGETGSGKSTQVPQYLYEWGWHSKGLIGVTEPRRVSTVTLANRVAEERGELV
GDTVGYVVRFLERMTVETKIKFMTEGILLRELLADPLLTQYGVIIVDEAHERNMLTDMVL
GLLKKILRKRSSLKLIISSATIDGGFFSEFFSWPVSGGSEVSVKLSIEGRMHAVSNFYLN
EPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYVASSEQENLKVLPM
YGSMTSNDQLAVFFTPPKGVRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPATCSD
SLVVVPVSKASAVQRAGRAGRMRPGKVYRLYTKQDYDALAPRQPPEMRRSEMSGAVLQLK
ALGIGNILRFDFPSPPPAQNLLSALETLYALDAIDEEGQLTKPVGYLLAELPFNAMLSKM
LHISGQMGCSEEIITIIAMLQVQSVFSRPVSAVAQQGGRIAHRHFQVAEGDFITLLNVYT
AFVEEGMTKEFCGQYYLIYRNLKRAHELREQLLTMARKKYGIPIFSCKGDVEMLCKCITA
GFFTQVAYLHHSGVYRQISSGTELAVHPNSTLYTLPQAQYVVYGELLQTTRIFMNHLTVI
KRQWLTELAPHYYQQTTVRD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtttaagccgaaattccttaaacccgacacagatgataccattacggatagc
gggggtggcgaccagcagtcctccgcctttgttttcaatgccaatcataatctgggctta
gtggaacagcgcgaacgcctgcccatacgacagtacagggatcaaattctttactgcctg
gagaagcatcaggttgtcatactggtgggcgaaacaggaagcggcaagagcacacaggta
ccgcagtacctatacgaatggggctggcattccaagggtctcatcggcgtcacagagccc
aggcgcgtttcaacagtaactctggccaatagagtggcagaggaacgcggagaactggta
ggcgacacagtgggctatgttgtgcgtttcctggagcggatgacggtggagactaaaatt
aaattcatgacagagggaatactgcttcgcgagctcctggccgatcctttactcacccag
tatggcgtcatcattgtagacgaggcccacgaacggaatatgctcacggatatggttcta
ggactgctgaagaagatcctacgcaaacgtagcagccttaagctcatcatctcctcggcc
accattgatgggggcttcttcagcgagttcttcagctggccggtctctgggggcagcgag
gtcagtgtcaagctgagcatcgagggacgcatgcatgcggtgagcaacttttacctgaac
gagccctgtgccgactacgtaaaagagacggtggagacggtgtggaaactgcatcagaag
gagccaccaggagatatactggcctttctcactggccaggaggaggtgttggaagccctg
gatctactgcgcgaatatgtagcctcctcggaacaggagaatctaaaagttcttcccatg
tatggcagcatgacgagcaacgatcagttggccgtcttcttcaccccgcccaagggagtg
cggaaagtggtgctggccacaaatatagcggagacttccattaccatcccaggcattgtc
tacgtcatcgactgcggttacgtcaaagtgaaatggtacaatccggccacctgcagcgac
agcctcgtcgttgtcccagtcagcaaggcgtctgctgtgcagcgagctggccgagcaggc
cgcatgcgtcccggtaaggtgtaccgtctgtatacgaagcaggactacgatgcactggcg
ccgcgacagccgccagagatgcgacgaagcgaaatgagcggcgctgttcttcagctcaag
gccttgggtattggaaatattctgcgcttcgactttccttcgcctccaccagcgcaaaat
cttctttcggccctggagacactctacgctctggatgccatcgatgaggagggacagctg
accaaaccagtaggatatctgctagccgagttgcccttcaatgccatgctctcgaagatg
ctgcacatctctggccaaatgggctgctccgaggagatcatcaccattatagccatgctg
caagtgcagtcggtgttctcacggcccgtatctgcggtcgcacagcagggcggacgcatc
gcgcatcggcatttccaggtggcagagggggatttcatcacgctcctcaatgtctacacc
gcattcgtggaggagggcatgaccaaggagttctgcggccagtactacctcatttataga
aatcttaagcgcgcccacgagctgcgggagcagctcttaaccatggcgcgtaagaagtat
ggaataccaatattctcctgcaaaggagatgtggaaatgctttgcaaatgcattactgct
ggcttcttcacccaggtggcctatcttcaccattctggtgtctacaggcagatcagcagc
ggcactgaactggctgttcatcccaattccacgctatatacgctaccacaagcccagtac
gtggtgtacggggagctgctgcagacaacgagaatcttcatgaaccatctgactgtgatc
aagcgacagtggctcacggaactggccccgcactactaccaacagactacggtgcgggac
taa
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