Drosophila pseudoobscura: 4818088
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Entry
4818088 CDS
T01032
Name
(RefSeq) RNA-binding protein 39 isoform X2
KO
K13091
RNA-binding protein 23/39
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
4818088
Spliceosome [BR:
dpo03041
]
Common components
Common spliceosomal components
General mRNP proteins
4818088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
4818088
NCBI-ProteinID:
XP_001357388
UniProt:
A0A6I8ULD9
LinkDB
All DBs
Position
4:11104694..11110337
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AA seq
623 aa
AA seq
DB search
MAEDFDVEAMLEAPYQKNSVSAGSGGRGGRGRSDGSDDSPRGGGGGPQAEINDGHAHNGT
RNGGSSSGGGASSNKKPTKRSRSRSGSRDNKSRRERGDRGDRGGDRSSYRDKEKDRERDR
HRDAGKRPGNDRERDKQERSRRSRSREERGGGGGAGGAADDRRVRYNDRGERDRRSRDRR
DGSKPIQRDRSRDRRRRSRSREQPRKRLSPVRERKRSPSRPRDKTTRRRGSYSPRRRSQP
NGGGGGGGGDRTPPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCN
KTKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHV
GPMRLYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKA
LEQLNGFELAGRPMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGL
AVPQAAANALLATAPQPAPVQQQQATPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLE
ECAKHGGVLHIHVDTASPTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVVNYH
SMFPDSVGTSELVALTRKNTDDD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggactttgatgttgaggcaatgctcgaggcgccgtaccagaaaaacagtgtc
agtgcgggcagcggtggacgtggaggacgcgggcgcagcgatggcagtgatgacagtccc
agaggcggcgggggtggtccgcaggcggagatcaacgatggtcatgcacacaatggaaca
cgcaacggcggcagcagcagtggcggaggcgccagttcaaacaaaaagccaacgaaacga
tctcgcagtcgcagcggttcgcgtgataacaaatcgagaagagagcgtggagatcgtggc
gatcgcggtggtgatcgcagcagttatcgcgacaaggagaaagatagagagcgggatcgc
catcgtgatgctggcaaacgtcctggcaacgatcgggaacgggacaagcaggagagatca
cgtcgcagtcgatcaagagaagagcgcggcggcggcggaggagcaggaggcgctgccgat
gatcgtcgtgtacgctataatgatcgcggcgagagagatcgccgctctcgggatcgtcga
gatggcagtaagcccatacagcgcgatcgatccagggacaggcgtcgacgcagtcgctca
cgtgaacagccgcgcaagcgactgagtcctgtacgtgaacgcaagcgtagtccttcgcga
ccaagagataaaactactcggcgtcgtggcagctactcaccccgccggcgatcacaacca
aatggcggcggcggcggtggtggcggcgatcgtacaccgcccaccgagctgagtcccgaa
gagcgggatgctcgcactgtgttctgcattcagctgtcgcaacgtgtccgggcccgtgat
ctggaggagttcttctccagcgtgggcaaggtgcgcgatgtgcgtctgattacgtgcaac
aagacgaaacgattcaaggggattgcctacatcgagtttgaggatcccgaatcggtggcc
ctcgctctgggcttgtccggccagcggctgctcggcgtacccattatggtgcagcacacg
caggccgagaagaatcgcctacagaatgcaacgcctgcattccagcccaagagccacgtg
ggtccgatgcgcctgtacgtgggttcgctgcactttgatatcaccgaggaaatgctgagg
gggatattcgaaccatttggcaagatcgatgctattcaactgatcatggacacggagaca
aatcgctctaagggatacggattcattacgtaccacaatgctgaagatgccaaaaaggct
ttggaacaattgaatggcttcgagctcgctggacgtcccatgaaggtgggaaatgtgacc
gaacgtctggatatgaacaccacctctttggacacggatgagatggatcgcactggcatt
gatctcggcgccacaggacgactccaattgatgttcaagctggcagagggagcgggtctt
gcagtgccccaggcggcggccaatgcgctgctggccacagcaccgcaaccggcaccggtg
cagcagcagcaggcgacaccatcgatagccacacagtgcttcatactatcgaatatgttt
gatccgcgcacggagacgaatcccacctgggacgtagagatacgcgacgatgtgctggag
gagtgcgccaagcatggcggtgtgctgcacatccatgtggacaccgcctcgcccacgggc
accgtatacgtaaagtgtccgagcacaacgacggcggtgctggcggtgaatgcgctgcac
ggccggtggtttgccggacgcgtcattacggccgcatacgtgcccgtggtcaactatcac
tcaatgtttccggattcagtgggcacctccgaattggtggcactgacgcgcaagaacacc
gacgacgattga
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