Drosophila pseudoobscura: 6897547
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Entry
6897547 CDS
T01032
Name
(RefSeq) probable histone-binding protein Caf1
KO
K10752
histone-binding protein RBBP4
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03082
ATP-dependent chromatin remodeling
dpo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6897547
03083 Polycomb repressive complex
6897547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpo03036
]
6897547
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
6897547
Histone modification proteins
HAT complexes
HATB complex
6897547
HDAC complexes
Sin3A-HDAC complex
6897547
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
6897547
PRC2.2
6897547
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
6897547
Heterochromatin formation proteins
Other heterochromatin formation proteins
6897547
Chromatin remodeling factors
NuRD complex
6897547
NuRF complex
6897547
NuRF complex (fruit fly)
6897547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EIPR1
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_RFWD3
MIOS_WD40
WD_LRWD1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR11_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
TAF1C_beta-prop
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
PROPPIN
Motif
Other DBs
NCBI-GeneID:
6897547
NCBI-ProteinID:
XP_002137693
UniProt:
A0A6I8V444
LinkDB
All DBs
Position
2:complement(20867142..20869628)
Genome browser
AA seq
442 aa
AA seq
DB search
MNDYNNNAELSVDEDVDVDVEVDGDGDAEQLIIEEYKIWKKNTPYMYDEIVTHALEWPSL
TAQWLPGASGQDGKEYSVHRLILGSHTTNNDPHQLLIASVPVPTEEAQIDRSRYDIEMGE
NGGFGPGCGKIEMEVIINHEGEVNRARYMPQDSCIIATKSPTSDVLVFDYTKHPSKPESP
GKCVPDLRLRGHTKGGFGLSWHPKQTGYLLSASDDEKICLWDINAAPKTHHVIDAKNIFT
GHNAPVRDVAWHNQKQTVFGSVADDRKLMIWDIRNGNTTKPLFKVDAHADAVTCLSFNPF
SEYTLVTGSADNTVALWDMRNLKNKLHSLVAHHGEITQVHWNPLNENIVASASSDCRLNV
WMLSKIGDEQCSEEVVDGPPELLFIHGGHTAIINDFSWNPNEMFPWTICSVSADNLMEVW
QMADIVYQEDEERGSEVPDSNN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattacaataacaatgcggaactcagtgtcgatgaggatgtcgatgtcgatgtc
gaggttgatggcgatggcgatgccgagcagttgatcatcgaggagtacaagatatggaag
aaaaatacaccatatatgtacgatgagattgtgacacatgctctcgagtggccatcgttg
acggcccagtggctgcccggtgcatccgggcaggacggcaaggaatactcggtgcatcgt
ctcattttggggtcacacacgacaaacaacgacccgcatcagttgctgattgccagcgtg
ccggtccccaccgaggaggcacagattgatagatcgcgttacgacattgagatgggcgag
aatggtggctttggtccggggtgtggcaaaatcgaaatggaggtcatcatcaaccacgaa
ggcgaggtgaaccgtgctcgctacatgccacaagactcttgcatcatagccaccaaatcg
ccaacgagcgatgtcctggtgtttgactacacaaagcacccgagcaagccggaaagtccc
ggcaaatgcgtgccagatctgcgcctgcgcggccacacgaaggggggatttggcctctcc
tggcatccgaagcagacgggttacttgctgtcggcttctgatgatgaaaaaatatgcttg
tgggacattaatgccgcacccaagacccatcacgtgatcgatgccaagaacattttcact
ggacacaacgctccagtgcgcgatgtcgcctggcataatcagaagcaaacagtcttcggt
tctgtggccgatgatcggaagctcatgatctgggatatacgcaacggcaacacgacaaag
ccattgtttaaggtcgatgcccatgcagacgctgtgacttgtctgtctttcaatcccttc
tcggagtacacattggtcactggatccgctgacaatactgtcgccttgtgggatatgcgt
aatctgaagaataaattacattcgcttgtggcacaccacggagagatcacccaggttcat
tggaatcccttaaatgaaaatatcgtcgcttcggctagcagcgattgccgcttgaacgta
tggatgttgtcgaaaattggcgacgaacaatgctcagaagaagtcgtggatgggccgcca
gagctgctcttcatccatggcgggcacacggccataatcaacgacttctcgtggaatccc
aatgaaatgttcccgtggaccatatgctctgtgtccgccgacaatttgatggaagtgtgg
caaatggccgatatcgtgtaccaggaagatgaggagcgtgggtccgaggtaccggactcc
aacaactaa
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