Drosophila pseudoobscura: 6897560
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Entry
6897560 CDS
T01032
Name
(RefSeq) structure-specific endonuclease subunit SLX1 homolog
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
6897560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpo03400
]
6897560
DNA repair and recombination proteins [BR:
dpo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
6897560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
zf-HC5HC2H
T5orf172
PHD_NSD
DUF7445
MUG113
Motif
Other DBs
NCBI-GeneID:
6897560
NCBI-ProteinID:
XP_002137705
UniProt:
B5DXG8
LinkDB
All DBs
Position
2:21198577..21201212
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AA seq
291 aa
AA seq
DB search
MPPPPEDEAIAHKGHFYGVYLLCSQSLESRYRAKCYVGFTVNPKRRIKQHNRGCDFGGAK
KTSKKGPWQMVMIVHGFPNNISALQFEWAWQQPTLSTRLKIFPDLKRKKPKETHFDYNFR
ILNRMLSVGPWHRLALTIRWLETDYERAFDLPIPCHMEIVSGKVSISASQRKLEEATGTA
PPVAWAHECHLCMQSIEQPERSRLGCTNPTCRLTCHMLCLASYLLGDEPGQYIPIGGECP
LCETRLSWSALLQRKRLQLGVPEEMHDNEEEDLSDDGPDVDSDVEVQEFSD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcctgaggatgaagccatcgcccacaagggacatttctatggcgtctac
ttgctatgcagccagagcctcgaatcgcgctatcgtgcaaaatgctatgtgggcttcacc
gtcaatcccaagcgacgtatcaagcagcataatcgtggctgcgatttcggtggagcgaag
aagaccagcaagaaggggccctggcagatggtcatgattgtccatggctttcccaacaat
atctcggccctgcagttcgagtgggcctggcagcagcccacgctctccacccgcttgaag
atctttcccgatctgaagcgcaagaagcccaaggagacgcattttgattacaattttagg
attctcaatcgcatgctgagcgtggggccgtggcatcgtctggcactcaccatccgctgg
ctggaaacggactatgagcgtgcgtttgacctgccgataccctgccacatggagattgtc
agcggaaaggtgtccatctccgcctcgcagcgtaaactggaggaggctaccggtactgct
ccgcctgttgcctgggcccacgagtgtcacctctgcatgcaaagcatcgaacagccggag
cgttcacggctaggctgcaccaatcccacttgccggctgacctgccacatgctgtgcctc
gccagctatctgctgggcgatgagcccggccaatacatacccattggtggcgagtgtccg
ctgtgcgagacccgactcagttggtccgccctgctgcagcggaaacgtctccagctggga
gtgcccgaggagatgcatgacaacgaagaggaggacctgagcgatgatgggcccgatgtg
gacagcgatgtagaggtccaagaattcagtgattaa
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