Drosophila pseudoobscura: 6897597
Help
Entry
6897597 CDS
T01032
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6897597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
6897597
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
6897597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
NID
Nup35_RRM_2
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
6897597
NCBI-ProteinID:
XP_033241884
UniProt:
A0A6I8WFA9
LinkDB
All DBs
Position
2:21943710..22050910
Genome browser
AA seq
660 aa
AA seq
DB search
MLFENPAVAAKLPFPYNVPPPLQAAAAAAAAVPNLRFQTPIKAFACLTAATRSVSEMNVT
SLYEYAGNPMDNAAAAAAAAAAGLIDPHHHHPDLHNALVASIANNSVAAINGTLTTAAVL
KSAAAAQQQQQSQVQQQQTQGSIVAPGQDQSQVAAQNAANGGGNPQQQQQVAAQQAALAL
LKENVNASAAGQNGSGGGGANLSNKSGSSGRSTPSLTGGSGSDPAPGKLFVGGLSWQTSS
DKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEKVLKVPIHTLDGKKIDPK
HATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFAQFGPVEETVMLMDQQTKRHRGFGF
VTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKESVTPAAQLLQKRIMLGSLGVQLPSAP
GQLIGARGGGLAMNPLAMLQNPTQLLQSPASAAQQALISQNPFQVQNAAAAAASMAANPA
NFGKLLATYPQTALQHVRYAPYSIPASAATANAALMQAHQAQSAAVAAHHQQQQQQHQNQ
QSHNAHAMAAAAQHQHQQQQNHHTAVAASNSASQVHSAAAAAALAANAANGAGAAGAHSL
AAAQQAALVAAGGNQLNASAAALAAAANPAAYSNYALANVDMSSFQGVDWSAMYGMGMYV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgagaatccagcggttgcggccaagttgccgtttccatacaatgtgccgccg
cctctccaggcggcagcagcagcagcggcagctgtgccaaatttaaggtttcagacaccc
attaaagcgtttgcctgcctgacagcagccacaaggtcagtatctgagatgaatgtcaca
tcactatacgagtacgctggcaatcccatggataacgctgccgctgcagcagcagccgcc
gccgccggcctcatcgacccacaccatcaccatcctgatctgcacaacgccctggtcgct
tccatagccaacaacagtgtggcggccatcaatggcactctgactacggctgccgtgctc
aagagcgccgccgctgcccagcagcagcagcaatcccaggttcagcaacagcagacacag
ggctccatagtggcgcccggccaggatcagtcccaggtcgcagcacagaacgccgccaac
gggggcggcaatccccagcagcagcagcaggtcgctgcgcagcaggctgccctggcgctg
ctcaaggagaacgtgaacgcctcggcggccggacagaatggcagtggtggaggaggggcc
aatctgagcaacaagagcggctcctcgggtcgctccactcccagtttgactggcggcagt
ggctccgatccggccccgggcaaactgttcgtgggcggcctcagctggcagacctcctcc
gacaagctgaaggagtacttcaacatgttcggcaccgtcaccgatgtcctcatcatgaag
gatcccgtcacccagcgcagtcgcggctttggcttcatcacattccaagatccctgcacc
gtggagaaggtgctcaaggtgcccatccacacactcgacggcaagaagatcgaccccaag
catgccacgcccaagaaccgcccccgtcaggccaacaagaccaagaagatctttgtgggc
ggcgtctcccaggacacctcggccgaggaggtcaaggcctactttgcacagttcggaccc
gtcgaggagacggtcatgctgatggatcagcagacgaagcgccatcgcggcttcggcttt
gtgacattcgagaacgaggatgtggttgatcgcgtctgcgagatccacttccacaccatc
aagaacaagaaggtcgagtgcaagaaggcccagccgaaggagtccgtcacaccggccgcc
cagctgctacagaagcgcatcatgctgggcagcctgggcgtacagctgccctcggcaccc
ggccagctgatcggggcccgtggaggaggactggccatgaatcccctggccatgctgcag
aatcccacacaactgctgcagtctccggcctccgctgcccaacaggccctcatatcccag
aatccgtttcaagtacaaaacgcagctgccgccgccgcctcgatggccgccaatcccgcg
aactttggcaagctgctagccacatatccacagactgcgctgcaacatgtcaggtatgca
ccttactcgatccccgccagcgccgctactgccaacgccgccttgatgcaggcccatcag
gcgcagagcgccgccgtcgctgcccaccatcagcagcagcagcaacagcaccagaaccag
cagtcccacaacgcccacgccatggccgcagcggcccagcatcaacaccagcaacaacag
aaccaccacactgccgttgccgcctcaaactccgcctcgcaggtccactccgccgccgcg
gccgctgccctggcggccaatgccgcgaacggagccggtgctgctggagcccatagcctg
gcagctgcccagcaggcggcccttgtggcagccggtggaaaccaactgaacgcatctgca
gctgccttggcagcggccgccaatccggctgcctactccaactacgccctggccaatgtg
gatatgtccagcttccagggcgtcgactggagtgccatgtacggcatgggcatgtatgtc
taa
DBGET
integrated database retrieval system
