Drosophila pseudoobscura: 6897972
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Entry
6897972 CDS
T01032
Name
(RefSeq) E3 SUMO-protein ligase RanBP2
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03013
Nucleocytoplasmic transport
dpo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6897972
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
6897972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
6897972
03110 Chaperones and folding catalysts [BR:
dpo03110
]
6897972
04121 Ubiquitin system [BR:
dpo04121
]
6897972
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6897972
Chaperones and folding catalysts [BR:
dpo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
6897972
Ubiquitin system [BR:
dpo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
6897972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
WH1
VID27_PH
TPR_1
ANAPC_CDC26
TPR_19
Motif
Other DBs
NCBI-GeneID:
6897972
NCBI-ProteinID:
XP_002138071
UniProt:
A0A6I8V3M0
LinkDB
All DBs
Position
2:complement(30136211..30145972)
Genome browser
AA seq
2784 aa
AA seq
DB search
MWTTRKEVDEQVHKILGKLPPGQLRDVKGMAVARMYYKIQEYPKAIEYLNSYLKVKEEAN
AHKLIAACYTMRKNPDRKLALEHYQRCIQLNPKQIEVINAACQLLLDDNNSSSLFSVECA
KFWLDMAGGIQLNESELMFQLRVKMKLHESTNGGGGGGDGALRDNSEINALEDIMLRELH
ARPHDVQVKVRLMRCYLEKKKLEEAFNYAFRVELDEKTFPSQCLDWYEIIWTTVTKLEQG
KDLKKWGQRFWQLALHILDRLVQLSLESGKSMPECSNYLFRLDQYLHKFNMEKPSSSSDP
LQPKMQQSCVDHYSGQVLLHAVAIVFKRELVSNHNKWIKSLKSVLPLLLLGYQSKPLQDN
FSEPWMKHCDADQKKLLQQWRLQGAFRCAQLGRTLFGCLQPAKSHDMDQKENIPSGQNNG
YQPMIGLFEDSDKLLACARLQWQDKNWRRQLFQVLFCQPDHKLKENTSHLVRNPKLEEPL
CEWPAEADIESYERQALLLKPQSLAQHVYLALGASETLGSAPRVLFYEGLRHDVTQDLSF
CGQESLSQLDIDLFLYATVIQTHSRLAGQRESYDRCNLGNFSASARPHMMPYANVISQLA
TPEQSSWWDLVLRLHKNQVPECSRGEQRAQIQMGLEAVRGVNGAKADIIILLKLGAILCS
REDRDVLERRIDTLYKQAFNMLRRDQHHGAAVNEHYARFFKLASAASSATYEERQRLADD
AILYFSSKMFKTHQYQQFIDEVRGLNLPMAVYMQAEAYRKLESSSQINREAKARYWERRR
DCLQQAQQLLRGHTKHPLCGMISGELRRCEDDRCETSYDIYGSPDNHNNSSSYEDAEDAE
NGDFYATASLSLNRSRRHGEPPAAALPRGTPVRGTPGGTPATAGTPLAFNAKFNQLEDMV
KQTNKSLCQFKDDMHQEMKNLTEKLTGLEDMIKKIKITHRDTPTRDVDAATALGLDDLFI
IEELDAQQQQQQQQQNQAAAAAAAAALQHQQVLASNYGVPNPNPGGFFNGVPAVPSPQDR
ILQGTYGSQLFNQNQLYNYYAAQAQQYMRTPPAPGSLPPLNMFGPQNPNFAGIPGIFPPA
PAVPPPRSYLEPSGNFGQTPSSLIQQQAPVQAAAVAALPPAAAAAAPPLLLAEPPKPPTA
AVRQQLVSPGGRCISPLSPLSPEYPVVTAPPSAVAAPAIPSLFNRALNNQPVEKEPPANV
VITSSDPLPKPATVAGVQPTLSVTIPAQHIKPSLVQNTEQQPQQHPQPATSFGALPATVL
TAAETPSSSGVFNFRFGTSQAESPFSFKTLVARAAAEKQKEQEAEKAQTQLNESAKSTTS
EPNKSAGAADASLEQDYDPRPDFQPIIELPDEIEVRTGEEDEEVKFCFRAKLFRLVSLEW
KERGIGNIKILKNPATGVSRILMRREQTYKVCANHKINRDISLTTPQEDTEHKSFIWAAN
DFADEVMVPEMFLVRFKSPDTAKEFHDAYTLACLEDSKAAVTKEVTVPVPAVPKAAPAAA
AAAVKDVTKSFVTSTPATNSSFGKPFEPANMKLSESLAALAAPAPANPISSTVVAKSLFG
GQLPADFASTAVASTPTATAATTVPPFASFSFGQKGAGPTASPFGNLSFGSLSFGSVSAV
NNNANSNNSTLFTTALIKDTTLQGEQQQQQQETEADAEAEDEYEPTAQFAPVIPLPELVK
EITGEEDEDVLFEHRAKLLRYCKETSEWKERGLGVMKILRNKQDASKVRLVMRREKVHKT
CCNQRLLPETTFKYLVKSTTALTWAAQDFADQELSEATLCIRFKKPETCKEFLDAVLKAQ
KEITSSSTSKKDQLEKKTVATATSAAAAPSKGFGDAFKPKAGSWSCEACYTSNGHEQLYC
LSCEGPKDATVPPKQSSGLDQSNALNLTTSSASKFSFGFSPATAAAAPQAPAANLSSGFS
FGAKATEKPAAAAAAPVAASSSAPAKLPAPPLTSGFGDAFKPKAGSWSCGSCYLNNTGDS
LYCSACEAPKDDTVPKKESNALGSSGIVLPATTKFNFGFGAAPAPAPAAATPAVPDGGVE
APKSVFGSASFSFVPKTSAPAASPAATLGSGTFSFTMPKPAQQQPKNSDGGGDDNAEDDY
ELEEEENQAYFAPVIPLPDKVDVKTGEEDEEVLYVQRAKLYRLTDEWRERGVGNVKILRH
KQTAKLRVLMRRESVFKVCLNHALNSSVAYKPKDERSWLFVVNDYSEGESVNERFTLRFK
NKEIAGNFLKVVNSALDGTAMAIVEEQNTSATPSTGDSSSTLISQKSTALADKMQLDSKF
FTGSDCTGCVGCDPDKFVWSNQTSTTTTTVVDDVDPPLPMHLPALKLPPAAEPAAQSQPA
TPQLGDSIFRASSLASANSGSFGGFGQAVSANSTAAPAHVAASKPEEKKSTNAFVFGTTA
TEKPVFGQTSSLFGGAKPQQQSIFSNAQGNVLGSIFGSGVAEPKDQSAKSIFGGVGTTPE
APKSIFGGAGKVEPVAAAPKTIFGGTNTSVFGSGSSGYVFGSGVATDAPAFGKNAQSISF
GDLGKQVTPTAQNADKETGENTADAVPNTTFADLAGADDFASLSAKSLGTPIGFNKSSGS
GGFYNLTHQNDFKNFQSPAPLKGDDHNTSGADGDGDATNDDNYDPYYEPIVSLPDEIVVK
TGEEDETKLFGERSRLYRFDTRTKEWKERGTGELKILVHPQLQSYRLLMRQEQVPKVLLN
MKIGASLKMSHLNEQKKSFSWCGLNYAADAEGKTTTVGVVEQLACRFGKQEIADQFLKMV
NQCIQRASEAAEHDQDQETSETED
NT seq
8355 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccactaggaaggaggtggacgagcaagtccacaaaatacttggcaaattgccg
cccggacagttgcgcgatgtcaagggtatggcggtggcccgtatgtactataagatacag
gaatacccgaaagctattgaatacctcaacagctatctgaaggtgaaggaagaggccaat
gcccacaaattgattgccgcctgctacacgatgcgcaagaatcccgaccggaagctggcc
ctggagcattaccagcgctgcatccagctgaatcccaagcaaatcgaagtgatcaacgct
gcctgccaattgctgctggacgacaacaacagcagcagcctcttcagcgtcgagtgcgcc
aagttttggctggacatggccggtggcatacaattgaatgaaagcgaactgatgttccag
ttgcgcgttaagatgaaacttcacgagagcaccaatggaggaggaggcgggggcgatggg
gcgctgcgcgacaactctgagataaacgcgctcgaggacatcatgctcagggagctgcat
gcgcggccacacgacgtacaggtaaaggtgcgtctcatgcgctgctatttggagaaaaag
aaactggaggaggccttcaactatgccttcagggtggagctggacgagaagacattcccc
agtcagtgcttggattggtatgaaatcatctggaccacagtcaccaagttggagcagggc
aaggacctcaagaagtggggccagcgcttctggcagctagcgctccacatcctcgaccgc
ctcgtgcaactcagcctggagtcgggtaagagtatgcccgaatgcagcaactatttgttc
cggctcgaccagtacttgcacaagttcaacatggagaagccatcgtcctcctccgatcca
ttgcaaccaaagatgcagcaatcctgcgtggatcactactcgggccaggtgctgctccat
gcggtggcgatcgtcttcaagcgggagctcgtgagcaaccacaacaagtggataaagagc
ttgaagagcgtgctgccactcctgctgctgggctaccagtcgaagccgctgcaggataac
ttttccgagccctggatgaagcactgcgatgccgatcagaagaagctcctgcagcagtgg
cgcctccagggtgccttccgttgcgcccaattgggaaggactctgttcggctgcctccaa
cccgccaagtcgcatgacatggaccagaaggagaacattccctcaggccaaaacaatggc
tatcagccaatgattggattgtttgaggactccgacaagctgctggcctgcgcccgcctc
cagtggcaggacaagaactggcgtcgccagctcttccaggttctcttctgccaacccgat
cacaaactgaaggagaacacctcgcatctcgtgcgcaaccccaagctggaggaacccctt
tgcgaatggcctgcggaggcggacatcgagtcctacgagcggcaagccctgctcctgaag
ccccagtcgctggcgcaacatgtgtacctggccctgggcgccagcgagactcttggaagt
gctccacgagtactattctacgagggactgcgccacgatgtgacacaagacttgagcttc
tgcggtcaggagtcgctctcgcagttggatattgatttattcctctatgcgacggtcatc
cagacccacagccgattggccggccagcgggagagctacgacagatgcaatctggggaat
ttcagtgcctcggcgcggccccacatgatgccgtatgccaatgtgatcagccaattggcc
acgcccgagcagagcagctggtgggatctggtcctgcgcttgcacaagaatcaagtgccc
gaatgcagccggggcgagcaacgagcccagatccagatggggctggaggcggtacgcggt
gtcaatggcgccaaagcggacatcatcatactcttgaagctgggggccattctctgctcg
cgcgaggatcgagatgtactcgagcgtcgcatcgacaccctgtacaagcaggccttcaac
atgctgcgtcgcgaccagcaccacggggcagccgtaaatgagcattatgcgcgattcttc
aagctcgcttcggctgccagctctgccacttatgaggaacgtcagcgcctggccgacgac
gccatcttgtacttcagctcgaagatgttcaagacgcatcagtatcagcagttcatcgac
gaggtgcgcggcctgaacctcccaatggccgtctacatgcaggccgaggcgtatcgcaag
ctggagtcctccagtcaaatcaacagagaggccaaagcgcgctattgggagcgccgcagg
gactgcctgcagcaggcacagcagttgctccgtggccatacgaagcatccactgtgcggg
atgatcagcggcgagctaaggcgctgcgaagacgatcgctgcgagacgagctacgatatc
tatggctcgccggataatcacaacaattcgtccagctacgaggatgccgaggacgccgag
aatggggatttctatgcgactgcttcgctcagcctcaaccgttctcgacgacatggggaa
ccgccggctgctgcactcccgaggggtacaccagttcggggtacgccaggcggcactccg
gccacagcgggcacaccgctggccttcaatgcgaaattcaatcagctggaggatatggtc
aagcagacgaacaagtccctgtgccagttcaaggacgatatgcatcaggagatgaagaac
ctcaccgaaaagttaaccggtctcgaggatatgatcaagaaaattaagatcacacacagg
gatacgcccacccgggatgtggacgcggccacggctctcggtctcgatgatctcttcatc
attgaggagctcgatgcacagcaacagcagcagcagcaacagcagaaccaggcggcggct
gccgcagcagcagcggcactgcaacatcaacaggtgttggcttcgaactatggagtaccc
aatcccaatcccgggggctttttcaatggcgtaccagccgtaccctcgccacaggatcga
atcctgcagggcacctatggtagccaattgttcaaccagaatcagctatacaattactat
gcggcccaggcgcagcagtatatgcgcactccaccggcacctggatcgttgccgccacta
aatatgtttggcccacagaatcctaactttgctggaataccaggtatattcccaccggca
cctgccgtgccaccgccaagatcctacctggagccctctggaaactttggacaaacgcct
tccagtctgattcaacaacaggccccagtccaagcagcagcagtcgcagcactgccacca
gcggcagcagcagcagctcctccacttcttctggctgaacctcccaagcctccaacggct
gcagtgcgtcagcaacttgtgtctcctggaggtagatgcatcagtccattgtcaccattg
tctccagagtatccggtggttacagccccaccatccgctgtagccgcaccggccattcca
tccctgttcaatcgcgctctgaacaaccagcccgtggagaaggagccaccggcaaatgtg
gtcatcaccagctccgatccgctgcccaaacctgccacagtcgctggcgtccagccgacg
ctcagtgtgacgatcccggcacagcatatcaagcccagtctggtgcagaacacagaacag
caaccacagcaacatccacagccagcaacatcgttcggtgctctgccagcgactgtccta
acagctgctgagacaccatcatccagcggagtcttcaatttcaggtttggcaccagccag
gcggagagtccgttctccttcaagacgctggtggccagggccgcggctgaaaagcaaaag
gagcaggaagccgaaaaagcccagacccaactcaacgagagtgccaagagtaccacgagt
gaaccgaacaagagtgcgggcgccgcagatgcctccctggaacaggactacgatccgcga
ccggacttccagccgatcatagagttacccgatgagattgaagtgcgcaccggcgaggag
gacgaggaggtcaagttctgcttccgtgcaaagctcttccgcctggtgtcgctagagtgg
aaggagcgaggcattggcaacattaagatcctcaagaacccggccaccggcgtctcgcgc
atcctcatgcgacgcgagcagacgtacaaggtctgtgccaatcacaaaatcaatcgcgat
atttccttgaccacaccccaagaggacacggagcataagtcattcatttgggcggccaac
gactttgccgatgaggtaatggtacccgagatgttcctcgtgcgattcaagtcccctgac
acggccaaagaattccacgatgcctacacattggcctgtctggaggatagcaaagcagct
gtaaccaaggaagtcactgtcccagtccccgcagtgcccaaggcagccccagctgcagct
gcagctgcagtcaaagatgtgaccaagagctttgtgaccagcacaccagccaccaattca
tcgttcggcaaacccttcgagccggcaaacatgaagctctcggaatcgctagcagctctg
gctgctccagcccccgccaaccctatctcgtcgacagtagtggccaaatctctgtttgga
ggacagctgcctgcagattttgcttctactgctgtggcatcgactccgacggcaaccgca
gcaacgacagtgccgccttttgccagctttagctttggccagaagggagcagggccaacg
gcttcgccgttcggcaatctgtcctttggtagcctgtcgtttggcagcgtttcggccgtc
aacaataatgcaaacagcaacaacagcacgctgtttaccacggcactgatcaaggacacc
accctacagggagagcagcagcagcagcagcaggagaccgaagccgatgccgaagccgag
gatgagtacgagccgacggcacagtttgccccagtgatccccttgcccgaactggttaag
gagatcacgggagaggaggacgaggacgtgctgttcgagcatcgggccaagttgttgcgg
tattgcaaggaaacgagtgagtggaaggagcgcggcctgggagtcatgaagatactgcgc
aacaagcaggatgccagcaaggtgcgcctcgtgatgcgtcgcgagaaggtgcacaagacg
tgctgcaaccagcggctgctgccagagaccacattcaagtatctggtcaaatccaccacg
gccctaacctgggcggcccaggactttgccgatcaggagctgtccgaagcaacgctgtgc
atccgattcaagaaacccgagacatgcaaggagttcctagatgcggtgctaaaggcacaa
aaggaaattacatcctcctccaccagtaagaaggatcagttggaaaagaagactgtagca
acagcaacatcagcagcagcagctcccagcaaaggctttggcgatgcctttaagcccaag
gctggcagctggagctgcgaggcctgctacacgagcaatggccacgagcagctgtattgc
ctgtcgtgcgagggtcccaaagatgcgacagtgccgcccaagcagtcatcaggcttggat
caatcgaatgctctcaatctgacgaccagcagtgcgagcaagttctcatttggcttttcc
cccgcaacagcagcggcagcaccacaagcaccagcagctaacctttcttcgggcttcagt
tttggagccaaggcaacggagaaaccagcagcagcagctgctgctccagtggcagcctca
tcatcagctcctgccaaattgcctgcccccccattgacgtcaggatttggcgatgcattc
aagcccaaggctggaagctggtcctgtggaagttgctatctgaacaacacgggagattcc
ctctactgcagtgcctgtgaggcgcccaaggatgacacagtgcccaagaaggagagcaac
gccctagggtcgtcgggtatcgtgttgccggcaaccacaaagtttaatttcggctttgga
gcagctccagctccagctccagctgctgcaacaccagctgtaccggatggaggagtagag
gcacccaagagcgtctttggatctgccagcttcagttttgtgcccaaaacgtcggcgccg
gcagcaagtcctgcggctaccctgggatcgggcacctttagcttcacgatgccaaagccc
gcccagcagcagcccaagaattccgacgggggaggtgatgataacgcggaggacgattac
gagctggaggaggaggagaaccaggcgtattttgcgccagtaatcccattgccggataag
gtcgatgtcaagactggggaagaggacgaggaggtgctgtatgtgcagcgggcgaagctg
tatcgccttacggacgagtggcgggagcgtggcgtgggtaatgtgaagatactgcgccac
aagcagacggcgaagctacgagtgctgatgcgacgcgagtcggtcttcaaggtgtgcctc
aaccacgccctcaactcgagtgtggcctacaagcccaaggacgagcggtcctggctgttt
gtcgtgaacgactacagcgagggcgaatccgtcaacgagcggttcacgttacgctttaag
aacaaggagattgccggtaacttcttgaaggtcgtaaatagcgccttggatggcaccgcc
atggccatcgttgaggagcaaaacacatctgcgactccttcaactggcgacagctcctcc
acattgatttcccagaagtccacagccctggccgataaaatgcaactggacagtaaattc
tttacgggatcggactgcacaggctgtgtgggatgcgatccagacaagtttgtctggtca
aaccagacctcaaccacaaccacaaccgttgtcgatgatgtggacccacctctgccgatg
cacttgccagcccttaagctaccgcctgccgcagagcccgctgctcaatctcagccagca
actcctcagttgggagactccatctttagagccagttcactggcgagcgcgaacagcggc
agttttggcggctttggccaggcagtgtctgccaattccacggcggctcctgctcatgtt
gcggccagcaagccagaggagaagaaatcaacgaatgcattcgtttttggcaccacagca
acagaaaaaccagtcttcggccagacttcaagcctgtttggtggcgccaaacctcagcag
cagtcgatcttcagcaacgcccagggaaatgttttgggttccatttttggcagcggcgta
gcagagcccaaggatcagagtgccaaatccatatttggaggagtcggcaccactcccgag
gctccgaaatccattttcggaggagcaggcaaagtggagcctgtggcggcggcgcccaag
actattttcggaggaacaaatacatcggtgtttggcagtggatcgtctggctatgtattt
ggtagtggtgtcgccacggatgctcccgcttttggcaaaaacgcccaaagcatctcgttt
ggtgatctgggaaagcaagtcacacccacagcccaaaatgctgacaaagaaacgggagag
aacacagctgatgctgtgccaaataccactttcgcggatctggctggtgccgatgatttt
gccagcttgtccgcaaagagtctgggcacacccattggcttcaacaagtcgtccggtagc
gggggcttctacaatctcacgcaccagaacgactttaaaaacttccaatcgccggccccg
ctaaagggcgatgaccacaacacgtcgggggcggatggcgatggggacgccacaaacgat
gataactacgatccctactatgagccaatagttagtctgcccgatgagatcgttgtgaag
acgggcgaggaggatgagactaagctgtttggcgagcgttcgcggctctaccgcttcgat
acgcgtacaaaagaatggaaggagcgaggaacgggtgagctgaagatcttggtgcatcca
caactgcagtcctaccgtctactcatgcgacaggagcaggtgcccaaggtgttgctcaac
atgaagatcggagccagcttgaagatgagccatttgaatgaacagaagaagagcttttcg
tggtgcggcctcaactatgccgccgacgcggagggcaagacgacaacggtgggagttgtt
gagcagttggcctgccggttcggtaagcaagaaatagcggatcagttcttgaagatggtc
aaccaatgcatacagcgtgccagcgaggcagctgagcacgatcaggatcaggaaacctcc
gagactgaggattaa
DBGET
integrated database retrieval system
