Drosophila pseudoobscura: 6898428
Help
Entry
6898428 CDS
T01032
Name
(RefSeq) uncharacterized protein LOC6898428 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpo04131
]
6898428
Membrane trafficking [BR:
dpo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
6898428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
RGS-like
C1_1
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
C1_2
PH
PDZ_Tricorn
RM2_Med14
PH_2
Motif
Other DBs
NCBI-GeneID:
6898428
NCBI-ProteinID:
XP_015039757
UniProt:
A0A6I8VER0
LinkDB
All DBs
Position
3:complement(11058060..11074912)
Genome browser
AA seq
2673 aa
AA seq
DB search
MDDPSIKKRLIDLCTDEHDYDEVQELPEESSIQQQQQQQPLESSSIAPTSSTTNGGSSSA
GTGTGTGTGTGTVVPSVVASTPAAAVVVAVDSVPELPSPKQKSVKNSKNKQKQKQLANKS
KIPRSPSLASSLSSLASSFSSHRDKDKDKDKEKDKDKDRDRESQSSSVPPQTPPLPAGYQ
QANKQSQMNGEATAGGTAPATPTAHHNNNNNVAGDNPLLGPADRSSLNLTTPLGGNHPQT
PIAGEGTTPATTPTTPSLALPKNFQYLTLTVRKDENGYGMKVSGDNPVFVESVKPDGAAQ
VAGLVAGDMILKVNGQEVRLEKHPTVVSLIKASTIVELAVKRQKMTRPASVGVVTTPMTP
ILSGRDRTASITGPQPVDSIKRREMESYKIQTLQKMLEQEKLNLERLKSDQNNPSYKLSE
ANIRKLREQLHQVGAEDAPTIKLQAAASNKNTALLTPNQIQHLSTSATHNNPHQHQQFHH
LHSHSHNNYQQQQPLPPQPLAHHSSPAFLSLLPRSLSSLSLGTRKNRIEKDFVASSPFNN
TADFLQHQRMQHQAEAMSQSLHQHTSTPTMQQQQQPFFHPHLQQLQQQQQQQQQHRFKET
PKSAAGSKSKNKFQISKSLIEEDVPPPLPQRNPPRQLNLDLKNGNASPQSGHLMAPVSDL
DRATSPQLNRSQLGVSGSGSNSNDNSPSSNASKSKRSKVKTKALSDPKMSTQMFLQMESA
CAPGGASGSGLVVDGGPPPLPPRLPGMMSEDMSRGSCQNLAQPNSLNTMFNYPLVSTCTA
VQSDNLKAAFPLSQRPNIVQQLQQHQQQLSSGQATAALGQTPNLGKKKHRRVGSSPDNMH
PRHPDRLTKTTSGSWEIVEKDGEVTPPGTPPPPYLTSSHMTVPEDPNEQCMGAAGAGIFI
ESHHYTPMGGTPSPIPTSLHSSHSIQAAQSNDTQKEIISMEDENSSDQEGPFIDENGPFN
NLTRLLEAENVTFLAVFLNYVLSNSEPAPLLFYLITELYKEGTSKDMRKWAYEIHSTFLV
PRAPLSWYRQDESLAREVDNVLQLEFDKVEILRTVFLRSRKRAKDLISEQLREFQQKRTA
GLGTIYGPTDEKLAEAKTDKQREQIIDKYLMPNLQLLTEDFEKDSPTEDVRKQALCSALS
TVIYRIFNTRPHPNSIVERVHHFVSRDKSFKSRIMGKNRKMNVRGHALILRQYYEVTHCN
HCQTIIWGVSPQGYHCTDCKLNIHRQCSKVLDESCPGPLPQAKRMVHNDKISKFMGKIRP
RTSDVVGNEKRSRQDEDLDVDMTPERGQSSIVRQPSDRRPDANISMRSNGNASCNTSALN
STDLQSSFHGSSANDSINPSGGTICPMELSTSVASTAPSSSGSVSAGLSAFAELNAPDTV
DKDARRERYTQNPQHKSAPVSVNRSESYKERLSNKRNRNSRRKTSDPSLSSRPNEEQLDL
GLSNANYVASSNSSLSSAGGSESPSTSMEHFAASGAAGGPASAGALAMSRELNLNQHPYL
LRQQHAQQHCQQDSFQCGSVAAGGSSIASSNSSFWSAGHPLNRQWNMDSDDDEDLNEADW
SSMVAAEMLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGMLSQDHLL
LLFPPALLTLREIHGAFEQQLKQRRIEHNHVVNHIGDLLADMFDGQSGDVLCEYAAQFCA
RQQIALEGLKEKRNKDEQLQKLLRKSESHKACRRLELKDLLPTVLQRLTKYPLLFENLHK
VTVRVLPENTDEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDRSSYDKEEF
KKLDLTQHRLIHDGNLTMKKNPSTQLHGLLFENMIVLLTKQDDKYSLKNLHTPLVVNNKP
VSPIMSIDAETLVRQEAADKNSFFLIKTKTSQMLELRAPSSSECKTWFKHISDAAAQHSK
HRPKNASNSHDTSIGDPAVTTIPHSNTKESLELASECPQPMAATATVTTTPLAPMLPIAT
VTPAPATSNSNVSSGSTTSGGVQLRNVHRESTGPSDTDADYVNTPKQQRLSQNDVNRSMS
IRSSGDGAGTSSSTNGSADQNDVTLRHSQSVRESQGARKVESAGEERNSSYGLVGGHSKR
DSASIVCSNNSNNTRTLLMQSPLVEPTAIQISISPAHTAEPVLTSGERLRRLDASIRGNL
LEKQKIICDIFRLPVEHFNEIVDIAMMPEAPKDSADIALAAYDQVQILTKMLNEYMHVTP
EQEVSAVSTVVCGHCHEKEKLRKKATLVSASPPPLPPPNRQHAQAQAQIPISRMMPKLQT
LDLEDVAIHEDDDGYCEIDELRLPVVPLRPLTAPTTPLAPFRAAPPAPAPATATVSTPTT
VVAAESSNSNADINKRQSTQSTDGAQEDSPSQKKQSEAEGKYDTDSPAEALKTEPAPEDK
PQNTNEQRAEKESIDGEKTEEKLDLAIAGAHSDNVASASASASGSAPVDELQQTPSSAGT
AGATNADKDHAGEEESVAIYELFAQCKATDVCDPLQVQHIPLSMVDSSTQTTEAPTEAEK
PAVPAAPSGSGSSSCGPNRIQHASVLEPSVPCHALSSIVTVLNEQISMLLPKINERDVER
ERLRKENQHLRELLSALHERQRVDDVKETPFDISKLMRAEEVEFDDDIDAMSNSSLTPTP
TPIPTASPSASASSSSQARTTEATKVDADEDVE
NT seq
8022 nt
NT seq
+upstream
nt +downstream
nt
atggatgacccatcaatcaagaaacggttaatagatttgtgcaccgacgaacatgattac
gatgaagttcaggagctgccagaagagtcaagcattcagcagcagcagcagcagcagccc
ttggagtcatcatcaatcgccccaacgagtagcacgacgaacggtggtagcagcagcgcg
ggaacgggaactggaactggaactggcactggaacagttgtgccatctgtggttgcgtca
acgccagcagcagcagttgttgttgccgtggattcagtgccagagctgccttcgcccaaa
cagaaatctgtgaagaattcgaaaaacaaacagaagcaaaagcagttggcgaacaaatcg
aaaataccccgatccccatcgttggctagcagcctgagcagtctggccagcagttttagt
agccacagagacaaggataaagataaggacaaggagaaggataaggataaggatagggat
agggagagtcagagcagttccgtgccaccacagaccccgccattgccagccggctaccag
caggcgaacaaacagagccaaatgaatggtgaagccactgctggtggcacagcaccagcc
acccccacagcccaccacaacaataacaataatgtagccggggataatcctctgcttggg
cctgcagatcgcagtagcctcaacctgacaacacccctagggggcaaccatccccagaca
ccgatagcgggcgagggaacaacgccagcgacgacgccaacgacgccaagtttagcatta
ccaaaaaattttcagtatttaaccctgacagtgcgtaaggacgagaacggatatgggatg
aaggtttccggcgacaatccagtgtttgtggagagcgttaagcctgacggggcagcccag
gttgctggtctcgtcgctggcgatatgatactgaaggtgaacggacaggaagtgcgcctc
gagaagcatcccacggtcgtgagtctgataaaagcctctaccattgtggagttggccgtg
aagcgccagaagatgacacgtccagcgtccgttggtgtggtgaccacgcccatgacaccg
attctgtcgggaagggatcgaaccgcatccattacagggccccaaccggtcgacagcatc
aagcgtcgtgagatggaatcgtacaagattcagacgttgcagaaaatgctggagcaggag
aagctgaatctggagcgactgaagagcgatcagaacaatcccagctacaagttgtcggag
gcgaatatccgtaagctgcgagagcagctccatcaagtgggagccgaggatgcaccaaca
attaaactccaagcagccgcgagcaacaagaacaccgcattactaacgcccaatcaaatc
caacacttgtctacgtccgccactcacaacaatccgcatcagcatcagcaattccatcat
ctccacagccacagccacaacaactatcagcagcaacagccactgccaccgcagccccta
gcacaccactcctcacccgcattcctatccctcctgccgcgttctctctcgtccctgtcg
ctgggcacacgcaagaatcggatcgagaaggactttgttgcctcctcgccgttcaacaac
acggcggacttcctgcagcaccagcggatgcagcaccaggccgaggccatgtcccagtcc
ttgcaccagcacacatccacacctaccatgcagcagcagcagcaaccgttcttccatccg
cacctccaacagctacaacagcagcagcagcagcagcagcagcatcggttcaaggagact
cccaagtcagccgccggttcgaagagcaagaataagttccaaatatccaagagcctgatc
gaggaggatgtgccgccaccgctgccgcagcggaaccctcccaggcagctgaatctcgac
ctgaagaacggcaacgcatcaccacagagcgggcatttgatggcgcccgtctccgacctg
gacagagctaccagtccacagctgaacagatcgcaattgggcgtcagcggcagcggcagc
aacagcaacgacaacagtcccagcagcaatgccagcaagtccaagcgatcgaaggtcaag
accaaggcactgtccgatccaaagatgtccacgcaaatgtttctgcaaatggaatcggcg
tgtgcccctggaggagcctccggtagtgggctcgtagtggacggtggaccgccaccattg
cccccgcgtctgccgggcatgatgtcggaggatatgagtcgtggcagctgccagaatctg
gcccagcccaactccctgaacacgatgttcaactatcccctggtttccacgtgcacagcc
gtgcagagcgacaacctgaaggcggcctttccgctctcccagcggccgaacattgtccag
cagctgcagcagcatcagcagcagttaagcagtggccaggccacagccgccctgggacag
acacccaatttgggcaagaagaaacaccgacgcgttggctcctcaccggacaatatgcat
ccacgacatccagatcgtctgacgaaaaccacttccggttcgtgggagattgtggagaag
gatggggaagtgacgccgccaggaacaccgccgccaccatatctgaccagctctcacatg
acggtgcccgaggacccgaacgaacagtgcatgggggccgccggagctggaatcttcatt
gaatcgcatcactatacgccaatgggaggtactccgtcgccgataccgacgtctctacat
tccagccattccatacaggcggcacagtcgaacgacacgcagaaggagatcatctcaatg
gaggacgagaactcgtccgatcaggaggggcccttcatcgacgaaaacgggccgttcaac
aatctcacacgcctgctcgaggcggagaatgtcaccttcttggcggtgttcctcaactac
gtactctcgaactcggaaccggcgccgctgctgttctacctgatcacagagctctacaag
gaaggcacttcgaaggatatgcgcaagtgggcgtacgagatacactcgacattccttgtg
ccgcgcgccccgctctcgtggtatcgccaggacgagtcgctggccagggaagtggacaat
gtactgcagctggagttcgacaaggtagagatcctgcgaaccgtattcctgcgaagccgt
aagcgcgcgaaagacctcatcagcgagcagctgcgagagttccagcagaagcgcaccgcc
ggcctgggcaccatctacggtccgacggatgagaagctggccgaagcgaagacggacaag
cagcgagagcaaatcatcgacaagtatttaatgcccaatcttcaattgctaaccgaggac
tttgagaaggactcaccgacagaggatgtgcgcaaacaggccctgtgctcggccctctca
acggtgatctatcgcatcttcaatacgcgtccccatcccaacagtattgtggaacgtgtg
caccactttgtcagcagagacaagagcttcaagtcacgtataatgggtaaaaatcgaaag
atgaatgttcgtggtcatgcattgatattgcgtcaatactatgaagtgacgcactgcaat
cattgtcaaacgattatatggggagttagcccccaaggctatcattgtacagactgtaag
ctgaatatacaccgtcagtgctcgaaagtcctggacgagagctgtcccggcccactgccg
caggccaagcggatggtccataacgataagattagtaaatttatgggaaagattcgacca
cgcaccagcgatgtagttggaaatgaaaaacgcagccggcaagatgaggacttggacgtt
gatatgactccagagcgcggacagtcctcgattgtgcgccaaccatcggatcgtcgaccg
gatgcgaatatatcaatgcgttcgaatgggaatgcatcctgcaacacctctgcgctgaac
agcactgacctgcaaagttcgtttcatggcagcagcgccaacgacagtattaacccaagt
ggcggcaccatttgccccatggaactgtcaacgagtgtggcgtcaacggccccatcgagc
agtggttcagtctctgccggtctgagcgcttttgccgagctgaatgcaccggatacggtg
gataaagatgcgcgtagagaacgatacacccaaaatccgcagcacaagagcgcgccagtg
tctgtgaatcgctcggagtcgtacaaggagcgcttgtccaacaaaaggaaccgcaacagt
cgccgcaagacctctgatccaagtttatcgtcacgtccgaatgaggaacaactggatttg
gggctttcgaatgccaactatgtggccagttccaattctagtctctcttcagctggtggc
tccgaaagccccagcacatcgatggaacactttgcggctagtggtgcggcaggagggccc
gccagtgctggggcccttgccatgtcaagagaattgaacctgaatcagcatccctattta
ctcagacagcagcatgcccagcagcactgtcagcaggactcgtttcagtgcggcagtgtg
gcggccggtggtagcagcatagcctccagtaattcgagcttttggagtgccggacaccca
ctgaaccggcaatggaacatggacagcgacgacgacgaggatctcaatgaggccgattgg
agttcaatggtggcggccgagatgcttgcagccctcaccgatgccgaaaagaagcgtcag
gaaattattaatgaaatttatcaaacggaacgcaaccacgtacgcacgctcaaactgctc
gatcggctgttcttcctgcccctctatgagagcgggatgctctcgcaggaccatctgttg
ctgctctttccacccgcgttgttgacgctgcgtgagattcacggagccttcgagcagcag
ctgaagcagcgacgcatcgagcacaatcacgtggtgaatcacattggggacctgctcgcg
gatatgtttgatggccagtccggggacgttctgtgcgagtatgcggctcagttttgcgcg
cgacaacagatcgcccttgaggggctgaaggagaagcggaacaaggacgagcagttgcag
aagttgctgcggaagtcggagtcgcacaaggcctgccgtcgcctcgagctgaaggacttg
ctgccgaccgttttgcagcgcctgaccaaatatccattgctcttcgagaatctgcacaag
gtcacggttcgggtattgcccgagaataccgacgaagcggaggccatacagcgtgccgtc
gaatcctcgaagagaatactcgttgaggtgaaccaggccgtgaagacagccgaggatgct
cacaaactacaaaacatccagcgcaaattggatcgatcctcctatgacaaggaggagttt
aagaagctggacttgacgcaacatcgcctgatacacgacggcaacctgacaatgaagaag
aaccccagcacacagctgcacggcttgctcttcgaaaacatgatcgtgctactcaccaaa
caggatgacaaatattcgcttaagaatctgcacactcctctggtggtcaacaacaagccg
gttagccccatcatgagcattgatgcggagacgttggtgcgccaggaggcggccgacaag
aattccttttttctcatcaaaacaaagacatcacaaatgctggagctgcgtgcccccagc
agttccgagtgcaagacatggttcaagcacatctcggatgctgcagcacagcactcgaag
catcggccgaagaacgcttccaatagccatgacacgagcatcggtgatccggcagtcacc
accataccgcattccaacaccaaggagtccctggagctggcgtccgagtgcccgcagcca
atggccgccaccgcgactgtgacaacgacaccattggcaccgatgctgccaatagccaca
gtcacgcccgcacctgcaacaagcaacagcaacgtcagcagcggcagcaccacctctggt
ggcgtccagctgcgaaatgttcaccgagaatcgacgggaccaagcgacaccgatgccgat
tatgtcaacacgcccaagcagcagcgtcttagccagaacgatgttaaccgctccatgtcg
atacgcagcagtggcgatggtgctggcaccagcagctctaccaatgggtcagcggaccag
aacgacgtcactctgcgccactcacagtctgtgagggagagccagggagccaggaaggtg
gaatcggccggcgaggagcgcaactcgagctacgggctggtggggggccactcaaagcgc
gacagcgccagcattgtctgctcgaacaactcgaacaacacgcgcacgttgttgatgcag
agtccgctggtggagcccacagctatccagataagcattagtccagcacataccgccgag
ccggtactgacgtcgggcgagcgcctgcgccgcttggacgcctccatacgaggcaatttg
ctggagaagcaaaagatcatttgtgatatcttccgtttgccagtcgagcacttcaatgag
attgtcgacattgccatgatgccggaggcacccaaggacagtgcagatattgcgttggcc
gcctacgaccaggtgcagatcctaaccaaaatgctgaacgagtacatgcacgtgacgccg
gagcaagaggtctccgccgtctcgacggtggtctgcggccactgtcacgagaaggagaag
ctccgcaagaaggcgactctggtttccgcgtcgccgcctccgctgcccccaccgaataga
cagcatgcacaagcgcaggcacaaataccaatttccaggatgatgcccaaactgcagact
ctcgatcttgaagatgtggccatacacgaggacgatgacggatactgtgagattgatgaa
ctgcggttgcctgtagtacccctaaggccactgactgcacccaccacgccattggctccg
ttcagagcagctccaccagcaccagcaccagcgacagcgacagtatcaacaccaaccaca
gtagtggcagctgagagcagtaactccaacgcggatattaataaacgacagagcactcaa
agcacggatggtgctcaggaggattctccgtcgcagaagaaacaatccgaagcggagggc
aagtatgatactgacagtcctgccgaagcactcaaaactgagccagcaccagaagataag
ccacaaaatacaaatgaacaaagggcagaaaaggaaagtattgatggcgagaaaactgag
gaaaagcttgatttggcaatcgctggagcgcactctgacaatgtggcatcggcatccgct
tcggcatctggatctgcacctgtggatgaattgcaacagactccgagcagcgcgggaaca
gcaggagcaacgaatgcagacaaagaccacgccggcgaagaagaatcggtagctatctac
gagttgttcgcccaatgtaaagccactgatgtgtgtgatcctctgcaggtgcagcatatc
ccgctgtctatggtcgatagctcgacacagacaaccgaagcaccgactgaagcagagaaa
ccagcagtaccagcggcgccttctgggtcgggcagtagctcctgtgggccgaaccgcata
cagcatgccagtgtgctggagcccagtgttccctgccatgcactcagcagcattgtgaca
gtactaaatgagcaaatttccatgctattgccaaaaattaatgagcgcgacgtggagcgg
gagcgattgcgtaaggagaatcaacacctgcgcgagcttttgagcgcgttgcatgaacgc
cagcgagttgatgatgtaaaggaaactccctttgatatttcaaagctgatgcgtgctgag
gaagtggagtttgatgacgatattgacgccatgtccaatagttccctgacgccgacaccc
acgccgataccgacagcctcgcccagcgccagcgccagcagcagcagccaggctcggaca
acggaggccacgaaggtggatgcggatgaggatgtggaataa
DBGET
integrated database retrieval system
