Drosophila pseudoobscura: 6898530
Help
Entry
6898530 CDS
T01032
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6898530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
6898530
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
6898530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_12
TPR_1
TPR_16
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_7
TPR_11
TPR_9
TPR_17
ANAPC3
ARM_TT21_C
ChAPs
BTAD
Motif
Other DBs
NCBI-GeneID:
6898530
NCBI-ProteinID:
XP_002138566
UniProt:
A0A6I8V4F7
LinkDB
All DBs
Position
3:13432976..13437516
Genome browser
AA seq
1232 aa
AA seq
DB search
MSSKESKALIKDIRETIKLGKHADAIHKCERLLKADPKSNAMGYLLLGAAYQSLDKTEAA
KSLRKSIEYTEGPATVALQGLSNCAPIVELPEIYDELVDLLPEKALDYWEKLFTLASDET
VAPLCFKVFKKRAQNPNDSHYAKIQEYLGRIWFAQDFEISAEDNVLYNKTMEALLDISEP
SLKSVVYKRFLKWLYKQKDYVACVRHACNMTVSHPKDVYGYEWICKTYCENHNQLDTGAW
QQELQQPIQAYADQLLELNPSSNLALLIKAFDFFAQGQYVPARQFAVQAHQSQPKYKVTL
ELLARIHMEFGAYKLALQLWQQLGQQNEAAGQCLSYEKDESKLREAVKVLLGHDKSEPNV
RALARCYIKLGEVQLLKDLPLDALSKAEFLLSPDEAIRAIAKDESFEALLLCGKLQMLQK
NYAEALSCMLKAARLRPHVAECFDYLGRLYPLATGDMARARKCYEKCISLNALAEEAVDA
LSFIYQQLGDEDLNEMLLMNTLRYLSNDESIRLQYKLGLHFLQVRKWDNAIQCFRIAIKH
DFRCMVYWESLGDAYAARGSYNSAIRVFQKILELSPVNCYALLQIGVIKTTIRMYSEAIE
DFDALLKLNPNYLPGLRGAAEAHIGIANNLKSQNLYGRAKQHFQSAVGLLESAFTQAEAQ
GMVWLWRLTASVFLQTAQLPGSLANLDVAGSLAKRDEAVAYLSRKDLLQLAQRFYLCALK
LKQNTYLWYELALACYCSAVYIPEEATSHLETASKVCKRAIKERSNRWQNWNLLGVINMH
AEHENLPLAQHCFIQALNLDRKSFTTWTNLGVLYIKANDIRLANEAFKRAQQSSPIYANA
WIGQAMVAELIGDQEEAFDLFRHCQQFDYHPEAALGFAYWVCEVLSDPVARAKPHNRHAI
GHMYADVYALDAINWYVQNEESEASIASLTFQGFLCARKKLYHQAIKAFTRASQLCEPGA
ERDTLYTNLGYLYLKLDQPHQAVNALNTVSHATFKPIVGLALAYYRSGQLQESYSIYNSV
LNNVAGQNDDKAATILVAMASMIYAFQGEADTKTLLYQCVLAKNAPIQALYSSCALAILH
RDNELNRTVMSELRAYDFSEKYCVDISYLTANYFLINEGRLDALRYLQKRVRMFPRSAGL
RKVLLKFLLDYFAGDQSYRLATSNVALGALRLGHRSLRNGTKASEEAETTIYASRAVIHV
DKARSLKLIQRAIRLNPTNLQARQLLATVSAH
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaaagaatccaaggcgctaatcaaggatattcgggagacaatcaagcttggg
aagcatgcggatgccattcacaagtgcgagcgcctgttgaaagccgacccaaagagcaat
gcaatgggatacttgttgcttggtgccgcctatcagagcttggacaagacagaggcggca
aagagcctgcgaaagtcgattgagtacacagaaggccccgctaccgttgccctgcaggga
ctctccaattgcgcgcccattgtcgagctgccagaaatctacgatgagcttgtggatctg
ctacctgaaaaagccctggactactgggagaagctattcaccctggcctcggatgaaact
gtggctcccctgtgctttaaagtgttcaaaaagcgggctcagaatcctaacgattcccat
tatgccaaaatccaagaatatctgggacgcatttggtttgctcaggattttgagatatcg
gcagaagataatgtactttacaataaaacgatggaagcactactggatatctcggagcca
agtttgaaaagtgtggtgtacaaacgattccttaaatggctatacaagcagaaggactat
gtggcctgtgtgcgccatgcctgcaacatgaccgtctcccatcccaaggatgtctatggc
tacgaatggatatgcaagacatactgcgaaaaccacaatcagctggacactggtgcctgg
cagcaggagctgcagcagccaatccaagcatatgccgatcaattactggagctgaacccc
agctccaacttggccctactgattaaggcattcgatttctttgcacagggccaatatgtt
ccggccaggcaatttgctgtgcaggcccatcagagtcagcccaaatacaaggtgacgctg
gagctcctggcccgaatccatatggaattcggggcgtacaaactggctctacaactctgg
cagcagctaggccaacaaaatgaagcggctggccagtgtctctcttatgaaaaggatgaa
tccaaattgagagaagccgtcaaagtgctgctgggccatgataaatcggagcccaatgtt
cgagccttagctcgctgctacatcaagttgggggaggttcagcttctcaaagatcttcca
ttggatgcactttccaaggcggaatttctcttatcaccagatgaagccattcgggctatc
gccaaagacgagtcttttgaggcgctgcttctatgtggcaagcttcagatgttgcagaaa
aactatgcagaggccctgagctgcatgctaaaggccgctcggctgcgaccgcatgttgcc
gagtgcttcgactacttgggtcgcttgtatccactggccactggcgatatggcccgcgcc
cgcaaatgctatgagaagtgcatcagcctcaatgccctggcggaggaggctgtggatgcc
ttgagctttatttaccagcagctgggcgacgaagatctaaatgagatgctcctgatgaac
acccttcggtacttgagtaatgacgagtcgattcgcttgcaatacaagctgggcctgcac
tttctgcaagtgaggaaatgggataatgccatccaatgctttcggattgccatcaagcac
gactttcggtgcatggtctattgggaatcactgggcgatgcttatgcggctcgaggctct
tacaactcggctattcgtgtctttcagaaaatcctcgagctgtccccagtcaactgctat
gctctcctccagataggcgtgatcaagacgacgattcgcatgtactcggaggcgattgaa
gatttcgatgcgctgctcaagctgaatccaaactacttgcctggcttgagaggcgccgca
gaggcgcacatcggtatagccaacaatctgaagtcccaaaatctttacggccgtgccaaa
cagcatttccaatcggctgtcgggcttctggaaagtgcattcacccaggcagaggcgcag
ggtatggtttggctgtggcgcctcacggctagtgtatttttgcagacggcccagctgccg
ggctccctggcaaatttggacgtggctggcagtttggccaagcgcgatgaagcggttgct
tatctctcacgtaaagatctgctgcaactggcccagcgcttctatctatgcgccttgaaa
ttgaagcagaacacatatctgtggtacgagttggccctggcctgctactgcagtgctgtt
tacattcccgaagaagcaacaagccacctggaaacggcttccaaggtatgcaagagggcg
atcaaggagcgtagcaatcgctggcagaactggaacctcctcggcgtcatcaatatgcat
gcggagcacgagaacttgcctctggcgcagcactgcttcatacaggcgctgaatctggat
cgcaaatccttcacgacatggaccaacctaggcgtgttgtatatcaaagcgaatgacatt
cgactggccaatgaggccttcaagcgcgcccagcaatcgagtccgatatatgccaatgcc
tggattggacaggcaatggtagcggaacttattggcgaccaagaagaggccttcgatctg
ttccgccattgccagcagtttgattatcatccggaggctgctctcggattcgcttactgg
gtatgtgaggtgctctccgatcctgttgcccgggccaagccccacaacagacatgcgatt
gggcacatgtatgcggatgtctacgcattggatgccattaactggtatgtccaaaatgaa
gagtcggaggccagtatagcgtcactcacgttccagggattcttgtgcgcccgcaagaag
ctttaccaccaggccatcaaggcttttacgcgcgccagccagttgtgcgagcctggagcc
gaacgagacacactgtatacgaacctgggatacttgtacctaaagctggaccagccccat
caggcagtcaacgctttaaatacagtgtcccatgccacgttcaaacccattgttggcttg
gccctggcatattaccgatccggtcagctgcaggaatcgtattctatatacaattccgta
ctaaacaacgtggcgggacaaaatgatgacaaggcggctaccatattagtggccatggcc
tctatgatttatgcgttccaaggcgaagcggacaccaaaactcttctctatcagtgtgtc
ctggcgaagaatgcgcccatccaggccctgtactcttcctgtgccttggccattctgcat
cgcgataacgaactaaaccggaccgtaatgtcggagctcagggcgtacgattttagcgag
aagtactgcgtcgatatatcctacctaaccgctaattatttcctgataaatgagggtcgc
ctagatgctctccgttacttgcagaagcgcgttcgcatgtttccccgctctgcgggactt
cgcaaggtgttgctcaagtttcttcttgattatttcgccggcgatcagtcttaccgactg
gctacctcgaatgtggccttgggagctctaaggcttggtcaccgcagcctgcgaaatgga
acaaaggccagtgaggaggcggaaacgacaatctatgccagtcgggctgtaattcatgtc
gacaaggcacgttccttgaagcttatccagcgcgccataagactgaatccaactaatctg
caagccagacagctgctagccaccgtttctgcccattaa
DBGET
integrated database retrieval system
