Drosophila pseudoobscura: 6898892
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Entry
6898892 CDS
T01032
Name
(RefSeq) nucleoprotein TPR isoform X2
KO
K09291
nucleoprotein TPR
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6898892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
6898892
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6898892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ZapB
Motif
Other DBs
NCBI-GeneID:
6898892
NCBI-ProteinID:
XP_015040592
UniProt:
A0A6I8VG57
LinkDB
All DBs
Position
3:20073572..20081748
Genome browser
AA seq
2343 aa
AA seq
DB search
MKLSGPQRLANVFSREELEQLPAGMKTKLQKYIDQFFGEYCKERAAAHRLTESEEKREEL
QNAVEDYKVKLSNFDQNVNELRAQLDQVSAERDHLLETVRSNEQIASSFRQEKNSIIEER
DSLLTLIERQNAELERLKEDLHSYRQQLSNAISAKCEAIARVDEIQSKEVALQTKEQRIE
NERILLQNEIRLLNSDLNRNNSELQNIRRENSLNTIQLENSLREKCDALQILQAEHAQVV
EVVGQLNEKIGELTSNAYKQSMASEKYVATLKNELDAKNKLFEIYKSTEEQNQADKNELL
QGIAEMKRMLSEVTEQHDKVEAELSSTKQQHSSELAERDATITDLRKEISEANRLLAHAK
GQSLEEAIYKLSPSAAVASRVIHPDFTITELYLKYVKALDELELANLDNSKMKLHMESMY
KEIQERAPEIEQLRIDFENLKEAYDHIIPERDELFEKKQCAEATLERAIFDLKSITKSNQ
LLEKSTKDLGRQVCTLLDELNCLRAGVPHVNHNRSGDSTSQSTNFDVITDQLVTFDSIVE
LQAQNQKLLQLTRQLAQTMDEQETERDTEKLEMNTECVKRAQERCSLLEEQLTEKNNALN
LLSSKCERYQKYFFAAQKRQGRQTVNLDDSAADMDVSESITLNTSAKAAEHTKEEVRKLE
QRIHSLEKQLVEESNKYASLKENYEYYTSEKRKNDALAHEQFDSMRKEVRELTSNNCKLL
NATDFQKEQIDILNRNIEALKKQISALEDRNRNYEKTIIKHEQTMHLLKDETLAAHKKSA
AAEAEAYNLRQENRSLKDSSARLQIEKESFRREHQSQSLLLNNLELIKSNIERSETEGRL
RLEQRLDDAARELAAQRRHQQEEQEKFQETVNEFKRQTETAIKLKDEEKQQAEKWKAELV
SVREELAQKTIQVNDLSKKLQESLTPSMNENPVTSANKRAREFELKYNQAAVEIESLKKE
LNSLRAHGEQFYKMSQSAEAEVKRLHELHSEMVANHEDEMKKWKNAEGELRARIDELEAE
AMLSNVTEQSRTINQTDQVKASQDELKTVLEKLTESGRTIRTLRSENTTLAESLHEVEVK
YAHEMVLHSTDIQDLTSLKTDNFKLRDELNQLKTGRESLQAAHDALVKSNAEAQTLLEKE
KEESDRRVADLNALNATLHDQIEALATKLTALSQSGSGQGQNSSILNESLTMDADQSLNI
SGMAVEEIRSNEQLLKIIKFLRHEKDLCVAKLDIVKAENARLASELTIQQKKVDELNACL
NQERSRNQTDVVSTSKHAEVLRKIETLNAITDSNRILREERNSLTQRVTELTSRIQSLEK
ELFPLQCGNKELTSKIEELNLENTSLRTEAVKWRQRANVLVEKSNRNPEEFKRIQTEREN
LAKQLTAERELSKKQNEEIGSLRSELPALTGKVQALDEARKKQMEESINLRQANTRQSQD
IMELKNRLLQKEEELLKATDDLETKEKALQDKDSKELALRKVAKRYRDSYVTLQAQQGGA
DISADLEKVRSELEEVGNQYRAAKEELEKVTTENDALKKRLTEPETDSNAARQDHKVKVD
KLIQDLTMARTDLVNQEATLASNKTQYDETVARLEKELQENIAANKEVNLRLTRENEALH
MRINQLQRQLGSQQSTKPSTSSVAEKGNISESSSPRTANVKPMSGSATVQQSATVTPWRG
GETPLASIRPISVQNSRTAAILPTSQQPSAGSASTSSSSTSTTSASASGSSSAVANTALV
PPQQQVHTTGSGALESMASSSPTSSHTDYMPSTSSAAVAVAAIPPMGATSAAESSQEAES
VQHPQQNDSQLFAGGSQQQVVALVSPRVEGSSSTSTSTSTSTSTPNPTAPSVQDANNQSQ
QPSTSGSSSSSSTVVSSHSRHTPSSSNVTTTQAGCSSIGIKRPRDVEGDSTNTEDGVPEK
MKRLRTPMHSEELSATHIGDSGMDVDQMPTSSQRDQEDDIQVVDSDDEDDVLADADDGPV
DGGEADQEGYEDSYEQDNDMDNEGADDENEMPSDPQDNNEVDIEEQQLQVQEESQLLDNQ
AGAAVVAASASTQENNQSQAITSGSGDSSNPAKLPQAETSPWKQAVASTSSAASRRTESS
SVEIVSSPQVSNFSEQPVRVETAEVDGTAAVAPDESAGPSGDGAAATLPQKPNEAAESNA
ADANKQPSESDLGGAEDICEADEAFAEETLDPGQGEDSQQLANENQNVGTSQSELTDNQP
NQAEGGSAEANEGTDGVSSEGEKQTVGVEEEGREAEATSPSDNTRYRTLRSGMPNNNRRV
RGARGNQNSNQNRSRIVWQNNANMQDQGSSSNRGYNHPRGTRTRGPRSRRPPANNFNNNP
GRY
NT seq
7032 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcagtggtccacagagattagcaaatgtgttttctcgggaggagctggagcaa
ttgccagccggcatgaagacaaaactgcagaaatatatcgaccagttcttcggggaatat
tgtaaagaacgcgctgctgcccaccggctcaccgaatctgaagaaaagcgggaggagttg
cagaacgcggtcgaggattataaggtgaagttgtcgaatttcgatcaaaatgtcaatgag
ctgcgcgcccaactggaccaagtttccgcagagcgtgatcatctgctggagactgtccga
agcaacgagcagatcgcgtcctccttcaggcaggagaagaacagtataattgaggagcgt
gactcgctattgacgttgatagaacgtcagaatgcggagctagaacgcctgaaagaggat
ctgcacagctatcgtcagcagttgagcaacgccatctctgccaaatgcgaagccattgcg
cgcgtagacgagatccaaagcaaagaggtggctctacagacgaaagagcagcgtatcgag
aacgagcgcattttgctgcaaaatgagattcggttgctcaacagcgatcttaaccgcaac
aacagcgagctgcagaacatccgcagagagaactccctgaacacaatccagctggagaac
agtctgagggagaagtgcgatgcacttcaaatactgcaggccgagcatgcccaggtcgtg
gaggttgttggccagttgaacgagaagataggggagttgaccagcaacgcctacaagcag
tccatggcatcagaaaagtacgttgccaccttaaagaacgagctcgatgccaagaacaag
ctctttgaaatttacaagagcacagaggagcagaatcaggcggacaagaacgagctattg
caaggcatcgcggagatgaaacgcatgctgagcgaagtgactgagcagcacgacaaggta
gaggccgagctgagttccacaaagcaacagcacagctctgagctagcagaacgcgatgca
acaataacggatttaagaaaggaaatctccgaggcaaatcgcttactggctcacgccaag
ggtcaaagtctggaggaggcaatctacaagctgtctccgagtgcggctgttgccagtcgg
gtgatccatcccgacttcacgatcaccgaactgtacttgaagtatgtcaaggccctcgac
gagctggagctagcaaatctcgataattccaaaatgaagctgcacatggagtccatgtat
aaggagatccaagagcgtgcccctgagattgagcagctgcgtattgatttcgaaaatttg
aaagaagcctacgaccatatcatcccggagcgggatgaattatttgagaagaaacaatgc
gccgaggcgacactggagagggcaattttcgacttgaaatccatcacaaagagcaaccag
ctgctggaaaaatcaacgaaggacctcgggcggcaggtgtgcacgcttctggacgagctg
aattgcctgcgtgcaggagtcccccacgtaaatcacaacaggtcgggagatagcacgagc
caatcaaccaatttcgacgtcattaccgatcagctagtcacctttgattcgatcgtcgaa
ttgcaggcacagaaccagaaactcttgcagttgacgcgccagctagcgcagacaatggat
gagcaagaaacagaaagagatacggaaaagttggaaatgaacacagagtgtgtcaagagg
gcccaagaaaggtgttccctgctggaagagcagctcacggagaagaacaatgcgctcaat
cttttaagctccaagtgtgagcgctaccagaagtatttctttgctgcccaaaagagacag
ggtcgtcagaccgtcaatctagatgattcggctgcggatatggatgttagcgaatctatt
actctgaacacgtcggcaaaggccgcagaacacactaaggaagaggtcaggaagctggag
cagcgcatacacagtctggagaagcagttggtggaggagagtaacaaatacgcatcgctc
aaggagaattacgaatactacactagcgagaagcgaaagaacgatgctctggcccacgaa
cagttcgattcgatgcgcaaggaagttcgcgagctgacatccaacaactgcaagctgctg
aatgccaccgatttccagaaagagcagatcgatatactaaacaggaacattgaggcgctc
aaaaagcagatatcggcccttgaggatcgaaacaggaactacgaaaagactatcatcaag
cacgagcagaccatgcacctactcaaggatgaaacactggcggcccacaaaaagtcggct
gccgccgaagcagaggcctacaatctgcggcaggagaaccgctctttaaaggactcgtcc
gcccgtctgcagatcgagaaggagagcttccgtcgggagcaccaaagccagtcgcttttg
ctcaacaatttggagcttatcaagtccaacatcgagagatctgaaactgagggacgcttg
cgcctcgagcagcggctagatgatgcagctcgagagctggctgcccagcgacgtcaccag
caggaggagcaggaaaagttccaagagactgtcaacgagttcaagcgccaaaccgagact
gccatcaagctgaaggacgaagagaagcagcaagccgagaagtggaaagcagagctcgta
agtgtccgcgaggagcttgcccaaaagacgattcaggtgaacgatctgagcaagaaactg
caggagagcctgacgccctcgatgaatgagaatcccgtaacgtcagccaacaaaagggcc
cgagaattcgagctcaagtacaaccaggctgcggttgagattgaatcgctcaagaaggag
ctgaactcgttgcgggcgcatggcgagcaattctacaagatgtcacagtctgccgaggcc
gaagtcaagcgcctgcacgagctgcactccgagatggtggccaatcacgaggatgagatg
aagaaatggaagaacgccgagggcgagctcagggcacgcatcgacgaactggaggccgag
gccatgctctcgaatgtcaccgaacagagcaggaccataaaccagacagatcaggtcaag
gcctcccaggatgagctgaagactgttcttgagaagctcaccgaatcgggtcgcacaatc
cgcactttgcgatctgagaacacgacgctggccgagtctctgcacgaagtggaagtaaag
tatgcccacgaaatggtcttgcactccaccgacatccaagaccttaccagtctgaagact
gacaacttcaagttgagggacgagctgaaccagctgaagacgggacgggaatcgctgcag
gccgcccacgacgccctggtcaagtcgaacgccgaggcccagacgcttctggagaaggag
aaagaggagtcggacaggcgcgtggccgacttgaatgctctgaatgcgactttgcacgat
cagattgaagcactggccacaaagctgacggccttgagtcagtcgggttcgggtcagggt
cagaacagttcgattcttaacgaatctctgactatggatgcagaccaaagtctcaacatt
tccggcatggctgtagaggagatccgcagcaacgagcagctcctgaagatcattaagttc
ctgcgccacgaaaaggatctatgtgtggcaaagctggacattgtaaaggctgagaatgca
cgcctagcgtcggagctcaccattcagcagaagaaggtggacgagctgaatgcctgtcta
aaccaagaacgctccaggaaccagaccgacgtggtttcgacctctaagcacgccgaggtg
ttgcgcaagatcgagaccctgaacgccatcacagatagcaatcgcatcctgcgagaggag
cgaaacagtctcacacagcgcgtgacggagctgactagccgcatccagagtttggaaaag
gaactgttcccgcttcaatgcggcaacaaggagctaacatcgaagatcgaagaactcaat
ttggagaacacctcgcttcgcaccgaggccgtcaaatggcgtcagcgagccaatgtcttg
gtggagaagagcaatcgcaatccagaggagtttaagcggattcagacagagcgcgaaaac
ctagccaagcagctcacggctgaaagggaacttagcaagaaacaaaacgaagagattggc
tccctgaggtcagagctgccagcgctgacaggaaaagtgcaagccctagacgaggcccgt
aagaaacagatggaagagtcaataaatctccgtcaggcaaacacacgccagtcgcaggac
atcatggagctgaagaaccgactgttgcagaaggaagaggaactgctgaaggccaccgat
gacctggagacgaaggagaaggctctgcaggataaggacagcaaggagttggccttgcgt
aaggtggccaagcgctacagggatagctacgtgactctccaggcgcaacaggggggagcc
gacatcagtgccgacctggagaaggttcgctccgagctggaagaagttggcaaccagtat
agagccgccaaggaggagctggagaaggtgaccacggaaaacgatgctctcaagaaacgc
ctgactgagcccgaaaccgattccaatgccgcccgtcaggatcacaaggtaaaggtggac
aagctcatccaagaccttacaatggccagaacggatctggtcaatcaggaggctacccta
gccagcaacaagacccaatacgacgagaccgtcgcccgcctggagaaggagctgcaggag
aatattgccgcaaacaaggaggtcaacttgcggctcactcgcgagaacgaggcgctgcac
atgcgcatcaatcaactccagcgtcaactgggctcccagcagtcgaccaagccctctacg
agctctgtcgcggagaagggaaatatatcagagtcctcatcaccacgcactgccaatgtg
aagcccatgtcggggtcggccacagtgcagcagtcggctactgtcaccccctggcgtggc
ggggagacacccttggccagcatcagacctatctccgtgcagaacagccggacggctgcc
atcctgcccaccagccagcagccgtcggcgggcagtgcttcgacatcctcgtcatcgacc
tctaccacatctgcatcggccagtggcagcagctctgccgtggccaacactgccctagtt
cccccgcagcagcaggttcacaccacaggcagtggagccttggagtcgatggcttcctca
tcgcccacatcttcgcacacagattacatgccgtcgaccagctcggcggctgtagcggtg
gccgccattccaccgatgggagccacctccgccgccgagagttcccaagaggcggaaagc
gttcagcatccacagcagaacgattcgcagctatttgcaggagggtctcagcagcaggtc
gtggccttggtatcgccacgcgtagagggctcttcgtcgacttctacttccacatcgaca
tcgacctccactccgaatccgactgcgccaagtgtccaggatgcgaacaaccagagccag
cagcccagcacttctggcagcagcagcagctcgtcgacggtagtcagcagtcacagcaga
cacacgccgtccagcagcaatgtgaccaccactcaggctggctgttcatccattggcatc
aaacgtcctcgcgacgtggaaggtgactccaccaatacagaagatggggtccccgagaag
atgaagcggctgcgtactcctatgcacagcgaagagctgtccgccactcacattggagac
tccgggatggacgtagatcagatgccaacctcgtcgcagcgagatcaggaggatgacatt
caggtggtggactctgatgatgaggacgatgtcttggcggatgctgatgacggccccgtc
gatggtggcgaggccgatcaggagggctacgaggattcttacgagcaggacaacgatatg
gacaacgagggtgcagacgatgagaacgaaatgccgtccgatcctcaagacaataacgag
gtggatattgaggagcagcaacttcaggtccaagaggagagccaattgctggacaaccaa
gcaggtgcggcagtagtggctgcctctgcctctacccaggagaacaaccaaagccaggct
atcaccagtggcagcggagactcttcgaatcctgcaaaattgccacaagccgagacctcc
ccatggaagcaggcggtcgcctctacatcttcggcagcatctcggcgtacagagagtagc
tccgtggaaattgtcagttccccgcaagtgtccaactttagtgagcagccagttcgtgtg
gagacagcagaggtagatggaaccgcagcagtggctcccgacgagagtgctgggccaagt
ggtgatggcgcagcagccacattaccccagaagccaaacgaggcagccgaaagcaacgct
gccgatgccaacaagcaaccaagcgagagtgacttgggcggagcagaagatatctgtgag
gctgacgaagcctttgccgaggagacgctggaccctggccagggtgaagactctcagcag
ctcgcaaatgagaaccaaaatgtaggcacaagccagtctgagctaaccgataaccagccc
aatcaggcggaaggcggttcggctgaagccaacgagggcacagatggagtctcctcagag
ggtgagaagcagaccgtgggtgttgaggaggagggacgcgaagccgaggccacgtccccg
tcggacaacacgcgatatcgcacgttgcgcagtggtatgccaaacaacaaccgtagggtt
cgcggggcgcgtggaaatcaaaattcgaaccagaatcgatcacgcattgtgtggcaaaac
aatgccaacatgcaagatcaaggttcctccagtaaccgtggatacaaccacccccgcggt
acccgcacccgcggccctcgctctcgtcgaccaccggcaaacaacttcaacaacaacccc
ggacgatactag
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integrated database retrieval system