Drosophila pseudoobscura: 6899972
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Entry
6899972 CDS
T01032
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6899972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
6899972
03009 Ribosome biogenesis [BR:
dpo03009
]
6899972
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6899972
Spliceosome [BR:
dpo03041
]
Complex A
U1 snRNP components
U1 related factors
6899972
Complex B
6899972
Ribosome biogenesis [BR:
dpo03009
]
Eukaryotic type
Pre-60S particles
Helicases
6899972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Utp25_C
Cas3-like_C_2
DUF2194
Motif
Other DBs
NCBI-GeneID:
6899972
NCBI-ProteinID:
XP_002135340
UniProt:
A0A6I8V152
LinkDB
All DBs
Position
X:57651743..57654017
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AA seq
545 aa
AA seq
DB search
MSPPRSGFNRGFGRSGGSVHTGRVDRRHRQSHGKGSPRRRNGGANRSGAGGMNDDFNDLP
SARWSDMRLTAFEKNFYREHPTTQSRPSHEVELFRRQHQIAIRGQAPNPIQFFEEVCFPD
YCMDEIRRQRYSEPTPIQAQAWPIALSGHNLVGIAKTGSGKTLAFILPAILHINGQQPLQ
RGEGPIALVLAPTRELAQQIQSVANDFGSSAFVRNTCVFGGAPRSKQASDLKRGVEIIIA
TPGRLLDFLQSGATNLRRCTYLVLDEADRMLDMGFEPQIRKVLGQIRPDRQILMWSATWP
KEVRQLAEDFLGSYIQINIGSLELSANHNIRQYVEVCGEHEKSAKLKDLLSHIYDQAHAP
GKIIIFVATKKKTDELARFINAFGVSVGSIHGDKSQMDRDSVLNDFRSGRANILVATDVA
ARGLDVDGIKYVINFDYPQSSEDYIHRIGRTGRKLSKGTSYAFFTRKNARCARALIDILR
EANQNVNPELENLARGGAGGAGGAGGGREPRSRVGRGSARNYGSGRYTRNANKNTNSSRA
RADPR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccacctcgcagcggcttcaatcgaggatttgggcgcagcggcggaagtgtgcat
acgggtcgcgtagatagaagacacaggcagtcccatggcaaagggagtccacggcgcagg
aacggaggagctaatcgcagtggtgctggcggaatgaatgatgatttcaatgatcttccc
agcgccaggtggtcggatatgcgcctaacagcttttgagaagaacttttatcgtgaacat
cccacaacccagagccggccatcgcacgaggtcgagctgtttcggagacagcaccaaatc
gccattcgtggacaggctccgaatcccatacagttctttgaggaagtgtgcttccccgac
tattgcatggacgagatccggcgccagcggtactccgagcccacgccgatccaggcacag
gcctggcccatagctctatcagggcacaatctggtcggcatagccaagacgggatctggc
aagacgctcgccttcattctgcctgccatcctgcatatcaatggacagcagccgttgcag
cgcggcgagggacccatagccctggtgctcgcccccacccgggaactggcccagcagata
cagtcggtggccaatgactttggctccagtgcctttgtgcgcaacacctgtgtctttgga
ggagcaccgcggtccaagcaggccagcgacctgaagcgtggagtcgagattatcatcgca
acaccgggccgattgctcgactttctgcagtctggagccacaaatctccgccgatgcaca
tatcttgtactggacgaagccgaccgcatgttggacatgggctttgagccgcagatccgt
aaggtactcggccagatccgcccggaccgtcagatactcatgtggagtgccacttggccc
aaagaggtgcgtcaactggccgaagactttctcggcagctacattcagatcaacatcggg
tccttggagttgtcggccaatcacaacatacggcagtacgtggaggtgtgcggagagcac
gagaagagtgctaagctcaaggacctgctgtcgcacatctacgatcaggcgcacgcaccg
ggcaagataattatattcgtggccacaaagaagaaaacggacgaactggccagattcata
aacgcatttggggttagtgttggatcgatacacggcgacaagtcccagatggaccgcgat
agtgtactgaacgacttccgaagcggacgggcgaatatcctggtggccacagacgtggct
gcgcgcggcctggacgtggacggcattaagtatgtcattaatttcgactatccgcagtcg
tcggaggactacatacaccggatcgggcggacgggcagaaagctctcgaagggcacgtcc
tatgcatttttcacgcgcaaaaacgccaggtgcgcacgtgctctgattgatatacttcgc
gaagcgaaccagaatgttaatcccgaattggagaatctggcacgcggcggtgctggaggt
gcaggaggcgctggaggaggtcgcgaaccgcgatcccgcgtaggtcgaggctctgcccgg
aactatggatcgggaaggtatactcgtaatgcgaataagaatacgaattcaagtcgggcc
cgggcagatcctcgctag
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