Drosophila pseudoobscura: 6900167
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Entry
6900167 CDS
T01032
Name
(RefSeq) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6900167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
6900167
03009 Ribosome biogenesis [BR:
dpo03009
]
6900167
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6900167
Spliceosome [BR:
dpo03041
]
Complex A
U1 snRNP components
U1 related factors
6900167
Complex B
6900167
Ribosome biogenesis [BR:
dpo03009
]
Eukaryotic type
Pre-60S particles
Helicases
6900167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
UTP25
Motif
Other DBs
NCBI-GeneID:
6900167
NCBI-ProteinID:
XP_002135506
UniProt:
B5DRG4
LinkDB
All DBs
Position
X:complement(64254064..64260357)
Genome browser
AA seq
799 aa
AA seq
DB search
MNMYNGQVNAYGGGAGAIGGMPPNRMGGPGGGAAGVGMFQRNRSAPYPGFAGPSNGGPRR
MNGTGQGPRMDHGFGGNQNNRTSTHGAHLPKIIWSEVNLTPFRKNFYKPCDTVLARTQGE
TESFLTNNEITIKGDQVPTPSIDFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIALSGR
DLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGS
NTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTTLKRCTYLVLDEADR
MLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLTNYIQVNIGSLTLSANHN
ILQIVDVCDESEKLGKLIKLLSDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIH
GDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRT
GRSNNTGTAYTLFTHSNANKANDLIQVLREANQEINPKLLSMSMSGGYKRGGGMGGGYRG
GNGYQGRNQQMGGGYNGGNNYRNNNASGGNMNRNGFNGGGGAPRFDQKPRTSPPNPGSNG
GYRPQGHQGYQGQQQQHQQQQQNGAAFSRFNPNAACFEPKVQSGPGAPQQANPQQQQLNA
QQQQPLLPDAVAHAAMAAAANYGIDQKRSRFSPYNMNFSNMPPPPVNQQQHPQQQAQQPH
QQQQAAVAAGAAGGMPPQAYGQYSSMSSSMATVSLNGGPTSMPNSYRPQYAVPTQAAPYM
MANSGDIYAYPPPPLPVQN
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtataacggacaggttaatgcctacggcggaggggcaggtgcaataggcggc
atgccccccaatcgcatgggcggccccggcggcggagctgctggcgttggcatgttccag
cgcaaccgctctgccccttatcccggctttgccggacctagcaatggcgggccacgtcgc
atgaacggcactggacaaggtccacgcatggatcacggcttcggcggcaaccagaataac
cgcacctccacacacggcgcacatctgccgaagataatctggtccgaggtaaatctgact
ccgttccgcaagaacttctacaagccgtgcgatacggttctagccaggacacagggggaa
accgagagtttcctcacaaacaacgagatcaccatcaagggggaccaggtgcctacaccc
agtattgacttcgaggagggcggcttcccagactacgtgatgaacgagatccgtaagcag
ggcttcgccaagccaactgccatccaggcccaaggttggccaatcgccttgagtggacgc
gacctggtgggtgtggcccagactgggtcaggcaagaccctggcctacgtgctgcccgct
gtagtgcacatcaacaaccagccgcgcctggagcgtggtgatggacccattgccttggtt
ctggctcccactcgcgagctggcccaacagatacagcaggtggccattgagttcggcagc
aacacccatgtgcgcaatacatgcatcttcggtggagcccccaagggacagcaggccagg
gacctagagcgtggcgtggagatcgtgattgccacaccgggacggctgatcgacttcctc
gagcgtggaaccactacgctgaagcgatgcacctacctggtgctggatgaggccgatcgc
atgctggacatgggattcgagcctcagattaggaagatcatgcagcagattcgtccggat
cgtcaggtgctgatgtggtcagccacctggcccaaggaagtgcgccagctagccgaggag
ttcctcacaaactacatacaggtcaacatcgggtcgctcacgctgagcgccaaccacaac
atactgcaaatcgttgatgtctgcgacgagagcgaaaagctggggaagctgatcaagctt
ctgtcggacatctcggccgaaaacgagaccaagaccatcatcttcgtggagaccaagaag
cgagtggacgagatcactcgcaatatctcgcgtcagggatggcgtgcatgtgccattcac
ggcgacaagtcgcagcaggagcgcgactttgtcttgtccagcttccgtaatggacgtcac
tcgatcttggtcgccacagatgtggctgctcgcggactggacgttgacgatgtcaagttc
gttataaactacgattatccttcgaactctgaggactatgtgcaccgcatcgggcgcacc
ggaagatcgaataacacgggcacagcatacaccttgttcacgcactcgaatgccaacaag
gccaatgatctgatccaagtcctccgcgaggccaatcaggagattaatccaaagctgctg
agcatgtccatgagcggaggctacaagcgcggaggtggaatgggcggcggttaccgcggc
ggcaatggctatcaaggtcgcaatcagcagatgggcggaggctacaacggcggcaataac
taccgcaacaacaacgccagtggcggcaacatgaatcgcaatggtttcaacggcggcggt
ggcgccccacgcttcgatcagaagccgcgcacatcgccacccaatccgggcagcaatggc
ggctatcgtccccagggccaccagggatatcagggacagcagcaacaacatcagcaacag
cagcagaacggagctgccttctcgcgcttcaaccccaatgccgcttgtttcgaaccgaag
gtgcagagcggcccaggtgcaccgcagcaagcaaatccacaacagcagcagctcaatgca
cagcagcaacagccgctgctgcccgacgcagttgcccatgcagccatggcagcggctgcc
aactacggcattgaccagaagcgctcccgtttctcgccgtacaacatgaacttctccaat
atgccgccgccaccagtgaaccagcagcagcatccgcagcagcaggctcagcaaccacat
cagcaacaacaggcagcggtggctgccggagccgcaggaggtatgcctcctcaggcgtat
ggacagtattcctcaatgtcctccagcatggcgacagtttccctcaacggcggaccgaca
agcatgcccaactcctaccgcccccagtatgctgtgcccacacaggcggcaccctacatg
atggccaacagcggcgacatctacgcctaccctccgcccccgttgcccgtacaaaactaa
DBGET
integrated database retrieval system
