Drosophila pseudoobscura: 6900547
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Entry
6900547 CDS
T01032
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpo03000
]
6900547
Transcription factors [BR:
dpo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
6900547
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
6900547
NCBI-ProteinID:
XP_002134931
UniProt:
A0A6I8V0D2
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Position
X:complement(47314848..47337074)
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AA seq
588 aa
AA seq
DB search
MMERLSTHLSLTGLSLAHPLQSHLSSVSSGSGSHHLGQLAAAVQQHHQQADQSHTHAHHL
HGQQLALGHQHQQSQQQHHQCSSNSSNGSPNGSSGLSGLHPHSALHLAHHHSQLHQHHQA
GQQQQQQQQTSSSHSQPAVSSASSHHSHSHSQAQSLHQPHSNGSSHLSASGAASGSNHHS
SAAHHGSASSASSSVMAAAAAAHLHHNSQASPISNLHQNMGTLMNSGSSASDVFFSLMIQ
NTTKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPF
IDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGISPGYFAPG
PTAAAYHLGSHLGQTSTPTTTQATLSGQMDKFALERSSYLSNAMSNAGSQASAAAYSAYL
DPSVLTKAYFDSKMYQDRAANYAFDISKIYGAQQHAAAHHQQQQQQQHQQQLLMAGGGGG
GGGGGGGGSASSHNNNSSSGLDERDATPQLEGGGSIVVEAKPHLHSPSDVGLDYAQYAQQ
YGGQLASAASVGAGGVGGVGVTASAGGAPSGGGAGAGADFRRPLTVIF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacgtctatccacacacctgtcgctcaccggcctatcgctagcccatccactt
cagagtcacctgagctccgtgagctccggcagcggatcgcaccacctcggacaactggca
gctgccgtgcagcagcaccaccagcaggccgatcagagccacacccacgcccaccacctg
cacggtcagcagttggcgctgggccatcagcaccagcaatcgcagcagcagcaccatcag
tgcagcagcaacagcagcaacggctcgccgaacggatcgagtggattgagcggcctgcat
ccccactcggccctgcatctggcccatcaccactcccagctgcaccaacaccatcaggca
ggacagcagcagcagcaacagcagcagacatcgtcctcccacagtcagccggcggtgtcg
tctgcctcgtcccaccacagccacagccacagccaggctcagtcgttgcaccagccccac
agtaacggcagctcgcacctgtctgcaagtggggctgcctctggtagcaatcaccacagc
agtgccgcacaccacggatccgcgtccagtgcatcgagcagcgtgatggccgccgcagcc
gccgcccatctgcaccacaactcacaggcctcgcccatcagcaacctgcaccagaatatg
ggcaccctcatgaacagtggcagcagcgccagcgatgtattcttcagcctgatgatccag
aacacaacgaagcgccagaacgaggagcacatcaaacgtccgatgaatgcttttatggtc
tggtcgcgtctgcagcggcgtaaaatagctcaggataatcccaaaatgcataactcagag
atatccaagaggctgggtgcagagtggaagttacttactgaggaggagaaacgtccgttt
atcgatgaggccaaacgtttgagggccatgcacatgaaggagcatccggactacaagtac
cgcccgcgacgaaagcccaaagccctgagacgcgacggttatccatatccgatgccatat
ccatcggtgcccgtggaggcgttacgtgccggcatttcgcccggttacttcgctcccggt
cccacagcggctgcatatcacctgggcagccatctcggccagacatcgacgccgaccacg
acgcaggccaccctctcaggacagatggacaagtttgccctggagaggagctcgtatctg
agcaacgcaatgagcaatgccggcagccaggcgagtgccgctgcctacagcgcctacctg
gaccccagtgtgctgaccaaggcctacttcgactccaagatgtaccaggaccgggcagcc
aactatgccttcgacatatcgaagatctacggagcccagcagcatgcggccgcccatcac
cagcagcagcagcaacagcagcatcagcagcagttgctaatggcaggcggtggaggtggc
ggtggaggcggaggaggaggaggcagtgccagctcccacaacaacaacagcagcagcgga
ctggacgagcgcgacgccacgccccagctagaaggtggcggcagcatcgtggtggaggcc
aaaccccatctgcactcgcccagcgacgtgggtctggactacgcgcaatacgcccagcag
tacggaggacagctagccagtgcagcgtccgtgggggctgggggagtgggtggagtcggt
gtcacggcatcggctggtggggcaccaagtggcggtggagcaggtgcaggcgcggacttt
cgacggcctctgacggtgatcttctga
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integrated database retrieval system