Drosophila pseudoobscura: 6900553
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Entry
6900553 CDS
T01032
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6900553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
6900553
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
6900553
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
DUF3839
G-alpha
Motif
Other DBs
NCBI-GeneID:
6900553
NCBI-ProteinID:
XP_015042916
UniProt:
A0A6I8VKL7
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Position
X:complement(47569474..47573379)
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AA seq
649 aa
AA seq
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MSRHRIVRTMDYKDEYDDAQQWLYDRERGRQSISTFISKNKDIKEEGEHDEDAEDEAYEK
ARRDSESFQMPELNEMDQAKLSSCVDEVRSVVGDTVSERRIVETSMKFDYDIQKILDEIL
NGEIKKSAKPTLRPKVPVPIAATTVKSASKPPPPAKISLKEPRRGFEIASPKLPSSPVVS
GRNSPVEVGEGDLSRTSASLFKVSKDQSQRNAQQLYEKERSDQKSHIHMIVIGHVDAGKS
TLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERARGITMDVGQSRIE
TKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQTREHAILVR
SLGVNQLGVVINKLDTVGWSQQRFTEIVTKLKSFLKQAGFKESDVSFTPCSGLTGENLTK
TAQETALTSWYSGRHLLDVIENFKIPERAIDRPLRMSVSDIYKGTGSGFCISGRVETGMI
CVNDKVLVGASREQAQVKSLTMDEFTQTSVFAGDQISVTLAGVDINNITVGCIISDPQTP
IPVTTRFQARIIVFSVKVPITMGFPVLLHHQSLIEPAVVCKLTASIHKSTGEVVKKKPRC
LGSNSCALVELETSRPICIERYADFKELGRIMLRVAGVTIAAGMVTKIR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccacaggattgttcggacgatggattacaaagacgaatacgatgatgcccaa
caatggctgtacgaccgggagcgcggcaggcagagcatctccaccttcattagcaagaac
aaagacatcaaggaggaaggagagcacgacgaggacgccgaggacgaggcctacgagaag
gccagacgcgactcggagagcttccagatgcccgaactgaacgaaatggaccaggccaag
ctgagttcctgcgtggacgaggtgcggagtgtggtgggcgacaccgtgtccgagcgccgc
attgtggagacctccatgaaatttgactacgacatacagaagattttggacgagatccta
aacggagagataaagaagtcggccaaacctacgctccgaccgaaggtgcctgtccccatt
gcagccactacagtgaagtctgccagcaagcccccgcccccggcaaaaatcagcctaaag
gagccgcggcgtggctttgaaatagcttctcccaagttaccgtcctcccctgtagtctct
ggcaggaattcccccgtcgaggtgggagagggcgatttgtcccgcacttccgccagcctc
tttaaggtctctaaggaccagtcccaacgcaatgcccagcaactgtacgagaaggagcga
tccgaccaaaagagccacatccacatgatcgtcatcggccatgtagatgcgggaaagagc
accctgatgggccacttactctacgacacaggaaacgtctcgcagcgcgtgatgcacaag
cacgagcaagagtccaagaagcttgggaagcagagcttcatgtacgcttgggttctggac
gagaccggcgaggagcgtgcccgaggtatcaccatggacgtggggcagtctcgcatcgag
acaaagacaaagattgtgactctgctagatgcgcctggccacaaggatttcatacccaac
atgatctccggtgccacacaggcggatgtggccctcctagtggtggatgccacgcggggc
gaattcgaatccggctttgagctgggtggacagacgcgcgagcatgccatcctggtacga
tccctgggtgtaaaccagctgggcgtggttatcaacaagctggacactgttggctggtcc
cagcagcgattcacggagattgtcaccaaactaaagtccttccttaaacaggcgggcttc
aaggagtcggacgtaagcttcacgccctgctctggcctgaccggcgagaatctcaccaag
acagcccaggagaccgcactcaccagctggtacagtggtcgccacctgctggacgtgatt
gagaatttcaagataccggagcgggccatcgacagaccgctgcggatgtcagtctcggat
atctacaagggcactggttctggattctgcatttctggacgagttgagactggtatgatc
tgcgtgaatgataaggtgctggtcggcgcaagcagggagcaggcgcaggtcaagtccctg
accatggatgagttcacccagacgagcgtctttgctggcgatcagatttcggtgacgctg
gccggcgtggatatcaacaacataaccgtcggctgcatcatcagtgacccacagacacct
attcccgtgaccacacgcttccaggcccgcatcatcgtcttcagtgtcaaggtgcccatc
accatggggtttccggttctgctccaccaccagtcgctcatcgagccggctgttgtttgc
aaactgacggcatccatacacaagagcaccggcgaggtggtaaagaagaagccgcgttgc
ctaggcagcaactcgtgtgccctggtcgaattggagacgagtcgccccatctgcatagag
cggtacgccgacttcaaggaactgggccgcatcatgttgagggtggctggtgtcacgatt
gctgctggaatggtcacaaagatacgctga
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