Drosophila pseudoobscura: 6900789
Help
Entry
6900789 CDS
T01032
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpo03009
]
6900789
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6900789
Ribosome biogenesis [BR:
dpo03009
]
Eukaryotic type
90S particles
Helicases
6900789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
HEM4
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
6900789
NCBI-ProteinID:
XP_002135148
UniProt:
B5DQ82
LinkDB
All DBs
Position
X:complement(53346492..53348546)
Genome browser
AA seq
597 aa
AA seq
DB search
MDEHDIFKLLTAGVRFSKKPKNPIKPSKTVVSSQTEPEPQPEQPQQVKKADEESENTEFR
LLGDAAGALAAAPKRKKAKDQKKLSVEQKELQKITEQANASRKQHSITALGKNIPAPVLS
FDDLIRDYKLLPRLQQNVLSYGFSQPTPIQMQALPVLFQKRALMACAPTGSGKTLAFLTP
IINGLRSHKTTGLRALVLAPTRELAQQIYRECSELTRETGLRTHFISKVSEAKQKHGAEC
KQKYDILISTPNRVRFLLQQQPPLLDLKGVEWFVLDEADRLMEEGQNNFKEQLDDIYAAC
SHPQKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLVA
MRNLVRQGLQPPVLVFVQSKDRAKQLFEELLYDGINVDVIHAERSQHQRDNCVRAFREGN
IWVLICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQDDTA
NLRSIALIIKNSGGTVPEYMLQMKKVRKSEARIRAKKPLEREDISTKIRPEASIEATQKS
AKLQKIQKAENILKKRAGRENATKTTQKTESGLNKPTKKAVEPKLKKLKKIKKDLKA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcatgatatatttaaactattaactgcaggagtacggttttccaaaaagcca
aagaaccccattaaaccgagcaaaactgttgtcagctctcagacagagccggagccgcag
ccggagcagccgcaacaagttaagaaagcagacgaggaatcagaaaacacagaatttcga
ctactgggagatgcagccggcgctcttgcagctgcgcccaagcgcaaaaaggccaaggat
cagaagaaactctcagtagaacagaaggaactgcaaaagatcacggagcaggcaaatgca
tcgaggaagcaacacagcataacagcgctgggcaagaacattccggcgcccgtgttaagc
ttcgatgacctgattagggattacaagctactgccacgcctacaacagaacgttctctcg
tacggcttctcccagcccacacctatccaaatgcaagcattaccggtgctgttccagaag
cgggctctgatggcctgtgcgcccactggttctggaaagacattggcctttctcacaccg
attatcaatggcctccgctcccataaaacgaccgggctgagggccttagtcttggcccca
acgcgagagctggcgcagcaaatctatcgcgagtgttcagagctgacgagggagacaggc
ctgcgcactcatttcatcagcaaagtaagcgaagctaagcaaaagcatggagcggagtgc
aagcagaagtatgatattctcatctccaccccgaatcgagtgaggttcttgctgcaacaa
caacctcctctgctcgatcttaagggtgtcgagtggtttgtactggacgaggcggatcga
ctgatggaggagggacaaaacaactttaaggaacagctggatgacatctacgccgcctgt
tcgcatccgcagaagtgcgtggcctttttcagtgccacatacacggtccctgtggccaag
tgggcgttgcggcatctcaagaaccttgtacggatcacaattggtgtgcagaacagcgcc
acggatacagtccaacaggaactactgttcgttggatccgagagtggcaagctggtcgcc
atgagaaacctggtgcgccaaggccttcagccgcctgttcttgtctttgtccaaagcaaa
gaccgtgcaaagcagttgtttgaagagctgctctacgacggcatcaacgtggacgtcatt
cacgccgagcgttcccagcatcaacgtgataactgcgtgcgtgccttccgcgagggaaac
atttgggtcctgatttgcacggagcttatggggcgcggtattgacttcaaaggcgttaat
ctggtcattaattatgattttccacccacgaccatctcttacattcatcgcattgggcgc
acgggtcgcgcgggtcgtccaggccgtgccattaccttcttcacgcaggatgatacggca
aatttgagaagcattgcattgatcattaagaactccggcggtactgttccggaatacatg
ctacaaatgaagaaagttcgcaaatcggaggccagaatacgagccaagaagccactggag
cgcgaggacatttccacaaaaatacgaccagaggctagtattgaggcaacccagaaatcc
gcaaaactgcagaagattcagaaagcggaaaatattctcaaaaagcgcgcgggcagggaa
aacgctaccaaaacgacacaaaaaactgaaagtggtctgaacaagcccacgaaaaaagct
gttgagccaaaactgaagaagttgaaaaaaattaaaaaagatttgaaagcctag
DBGET
integrated database retrieval system
