Drosophila pseudoobscura: 6901538
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Entry
6901538 CDS
T01032
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X4
KO
K14296
nuclear pore complex protein Nup153
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03013
Nucleocytoplasmic transport
dpo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6901538
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
6901538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
6901538
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6901538
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Serglycin
CDK2AP
Motif
Other DBs
NCBI-GeneID:
6901538
NCBI-ProteinID:
XP_002134213
UniProt:
A0A6I8V0H3
LinkDB
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Position
X
Genome browser
AA seq
1780 aa
AA seq
DB search
MSEFEDSPHQNSQTKKTLQRHQTTKFSTRSGSSTHPLTPLREVREPEEGAEDDSAAGSPR
VSRKSLMGRVKLGVSNILSSSWFSPTSKAITPEAQEEQQQQQNGTGTTSLTKRKRGRRRI
ELAEPDGEDSPAGGLLPDVDDGAAARGLDYEEVALADNIAEHDLVGEDEQTRRSEYNVFA
LRKRRTAIAADDDFDDDDDEVPDGDEEEDEDDGDDDHAQASASPPPKRRQLELETSVHLP
SMRRLPLPLVSSTPAAAAAASAGQLYTSGNSQALGSRSHSRGSNKGGVPPHRRTYMNLYH
QHQQREPGYNFFAGNESAAEATTGDLPVSIRRSLNIPAIEHPRGRSFSFGQTSSSFSAVP
LAFHKRPPLLGQTDTIPEASLDVAQSDNERIEHLLNICKSNNNISSSNNNNNIIKSKRGA
ATATAAAGAEAGSGADLESELNEYAEAVEASDSYPYHHNSNNNSDQWFYGNLQSAKSIFT
RGSAQPTHHNSTCSLNSLNKRRRFNAYIYGSSSALSDSRLLTRSASASAWGSGSTLSSPF
YKGQTTFGGNSAHNRIFGQSGGSSSSVAMNSGGRSPAAHQAPPSTGYRVKKIAMCPRKQT
ETPNTSVVDSMSLSTSTRRILSLLETYSSPLFDVKRLGNTLKEQQQQQQQQQLQKRQTSI
SYSPPMQQVLERRRLHRVTQSSKELLLNYKPKASSATTMALAALPARHTNNNNNNSHTNK
MRSRLSHTSSRKPREDIELAPEPFDLPMINFPAMANTPTFDLVIKPPPPPTVPSVTANPA
VPRPAVNFVGANVNSAATETARAPANASGSGSVSASVSSAALQPSNVSGRRFSFVEPIPV
PILGEGETAQESRNTRHFSFPAPASFETQQQKQSLPFMNGPTTAASAHNPSSSQLGVVGG
FSQKFMKSATEWECDVCMIRNKSELVRCAACETPKPSKTAAPPTSAVPLSTASAFGDRFK
KSSSAWECDTCMIFNKSEDSKCVACETPRQGATTAARKTTTDCFSITNSPGCGSGSGSGS
GSGSGSGFSTSSSSSGFGQAFRPKANTWECQTCLVMNQTSAVECVACQSRNPNASSESSS
SSSASNPPTNVSSSTSNSNTTSFKFGFTPEQQKQQQAVKQDASFQQLVAAQKAANWECET
CMAMNDHSVSTCCCCEQLRPRSDDRKPSSNATHNVPTFTFGFVPKAKEAAPVQPALPAPT
SNAAPQFSFGFGQSKDVADSNKASTGGFKFGALPTQEEPKSIDLRATPTATKATSTTGIE
TAATGAAATVTPVSQFSFRAPTTTSTQLSSSSDTATATAAATATTATAAATATTATAAAT
TVKSQVFSFGTPSLPSSSSAVSSSTHTSGSNASATLAISSSNTKPMFIFSAAPSATTSSV
SSSTSQQPTVTTAPVVFFGAGTTTNPGGPAATSSTSFAATPAPASVSAAAAPEPAPAPGL
FSFGGPSPASSTTKAAPSSNSNTFFFGQTPTSTAAPTTNATGSIFGAAVTSAAPPLSFGE
KRAASGIPANTQTKPVSFGWPSASASPSPSLIPSNGSTAQVPATATATGSTSVPTVVSGG
SVFGSGFGSGFGSTSTASTTTTPAPTSAFGGNGALPTTGFGFVGNSMAPHSLPAPAPGPA
AMFSNAIAPAFGGSNGGGGGFGGASTAAAAKPSFNFGGSSALSQSAATSGPFNFGGSGTA
GSAIPAKPAFNFTGSATVSAGTATPQATPAFNFSAGSATANSLASGDSTPNANAPFQFSA
GAPAAANMFAFNPPPAGNAAQNSQMARRKIRAPVRRLPPR
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtttgaggatagtccacaccaaaatagccaaacaaaaaaaacactgcaacga
caccaaaccacgaaattcagcacgagatcaggatcgagcacacatccgctaacgccgctc
agggaagtacgcgagcccgaggagggcgccgaagatgattctgctgccggctcaccccgc
gtctcccgcaaatctctcatgggaagggtgaagctgggcgtttcaaatatcctgtcatct
tcatggttctcaccaacttctaaggccatcaccccggaggcccaagaggagcagcaacaa
caacagaatggaacaggaacaacgtctctaacgaaaaggaaacgaggacgccgtcgtata
gagctggccgaacccgacggcgaggattcacccgcggggggcctgctacccgatgtggat
gatggcgccgctgcacgaggtctggactacgaggaggtggccctggccgacaacatagcc
gaacatgatttagttggcgaggatgagcagacacgccgcagcgaatacaatgtgttcgcc
ttgcgcaaacggcgcactgctattgccgccgatgatgattttgatgacgatgacgacgag
gtgccagatggtgacgaagaggaagacgaggacgatggtgacgatgatcacgcacaagcg
tcagcctctcccccgcctaagcgtcgacagttggaactggagacaagcgtccatttacca
agcatgcggcgactgccattgccactggtttcctccacgcccgctgctgccgctgccgct
tccgccggtcaactatacacctcaggcaattctcaggcattgggcagccgcagccatagt
cgtggctcgaacaagggcggcgtgcctccacatcgtcgcacctacatgaacctctatcac
cagcatcagcagcgtgagccgggctacaacttctttgcgggcaacgagtcggccgccgag
gccaccacaggagatctgccagtcagtatacgtcgatcgctgaacatcccagccatagag
catccacgcggtcgtagcttcagcttcgggcaaaccagcagcagtttctccgccgtgcca
ttggccttccacaagagaccccctctgctggggcagactgacacgatccccgaagcatcc
ctcgatgtggcacagtcagataatgagaggattgagcatctactgaatatctgcaaatcc
aataataatatcagcagcagcaacaacaataacaacattatcaaatcgaagagaggagcc
gccacagccacagcagcagcaggagcggaagcgggatcgggagcagatttggagagcgaa
ctgaatgaatatgccgaggcagtggaggcctccgattcctatccctaccatcacaacagc
aacaacaacagcgaccaatggttctatgggaatttgcagagcgcaaagtcaatatttaca
cgcggctcggcccaaccgacgcaccacaattctacgtgttcgctgaattcgctgaacaag
aggcggcgcttcaatgcctacatctatggcagctcctcggccctgagcgacagccggctg
ctgacgcgcagtgcttccgcctcggcctggggctccggctcaacattaagctcgcccttc
tacaagggccagaccacattcggcggcaattcggcgcacaatcgcatctttggccagagt
ggcggctcctcgtcatcggtggccatgaactcgggcggccgttcaccggccgcccatcag
gcgccaccctccaccggataccgcgtaaagaaaattgctatgtgccccagaaagcaaaca
gagacaccaaacacatcggtcgtggacagcatgtccctctcgacctccacacgtcgcatc
ctgagcctactggagacgtactcctcgcctctgtttgatgtcaagcggctcggaaacaca
ctgaaggagcagcagcagcagcaacagcaacaacagctgcaaaagcggcaaactagcatt
tcctattccccgccaatgcaacaggtactcgaacgacgtcgcctgcaccgtgtcacccag
agctcgaaggaattgcttttgaattacaagccaaaggcatcatcggccaccaccatggcc
ctggcagctctgccagcccgtcacaccaataataataataataatagtcacacgaacaag
atgcgctcccgactgagtcacacgtcgtctcgcaagccgcgcgaagatatcgaactggct
cccgaacccttcgacttgccgatgatcaatttcccggccatggcaaatacaccgacattt
gatttggtcatcaagccaccgccgccgccgacggtgccatcggtgacggccaaccctgca
gtccccaggcctgcggttaattttgtgggtgccaatgttaattctgcagcaacagaaaca
gcaagagctccagctaatgccagtggcagtggcagtgtcagtgccagtgtcagttctgca
gccttgcagcctagcaacgtatcaggacgtagattcagctttgttgaacccatacccgta
cccatactgggagaaggagaaactgcacaggaatcgaggaacacgcgccatttctccttt
ccagcaccagcttcatttgagacgcaacaacagaagcagtcgctgccattcatgaacggt
cccaccaccgctgcatcggcacataatccaagcagcagccagctgggtgtggtaggaggc
tttagccagaagtttatgaaatcagccactgaatgggagtgcgatgtgtgcatgatcaga
aataagtcggagctggttaggtgcgcagcctgcgagacgccaaagccttccaagactgca
gctccacctacatctgcagttccattgtcgactgccagcgcgttcggagatcgtttcaag
aagtcttcgagtgcctgggagtgcgacacatgcatgatattcaacaagagtgaggatagc
aagtgcgtggcctgtgagacgccgcgccagggagctaccacagcagccagaaaaaccacc
accgactgtttctcaattacaaacagcccggggtgcggttccggctctggctccggatcg
ggatcgggctcgggatcgggtttctccacatccagttcgagttccggctttgggcaggct
ttcaggcccaaggccaacacatgggagtgccagacatgtctggtgatgaatcagacgagt
gccgtcgagtgcgtcgcctgccagtcgcgcaatcccaatgccagcagcgagtccagctcg
agctcctccgcaagcaatcctccaaccaacgtctcttcgagcaccagcaacagcaacact
accagcttcaagtttggcttcaccccagagcagcagaagcagcagcaggcagtcaaacag
gatgccagttttcagcagctggtggctgcccagaaggcagccaattgggagtgcgagacg
tgcatggccatgaacgaccattcggtctccacgtgctgctgctgcgagcaactgaggccg
agaagcgacgaccgcaaaccctcatccaacgccactcacaatgtgcccacgttcacgttc
gggtttgtgccaaaagcaaaggaagcagcaccagtccagccagccctgccggctccaaca
tcgaacgctgctcctcagttctcctttggctttggccagagcaaggatgtggcagacagc
aacaaagcttcgacaggaggattcaagttcggagccctccccacccaggaggagccaaag
tcaatcgatctacgggcaactccgactgccacaaaggccacatccaccacaggaatcgaa
acagcagcaacgggagcagcagcaacagtgactcccgttagccaattttcattcagagcc
cccaccaccacatcgacacaactgtcctccagcagcgacacggctaccgctaccgccgca
gctaccgcaactaccgcaaccgccgcagctaccgcaactaccgcaaccgccgccgctacc
actgtcaagagtcaagtgttcagctttggaaccccgtcattaccttcgtcatcatcggca
gtgtccagctcgacgcacacttcgggcagcaacgcgagcgccacccttgcgatcagctcc
tccaatacgaagcccatgtttatcttcagcgctgccccctccgcaacgaccagcagtgta
agcagcagcactagccaacagccgacggtgacgacggcacctgtggtcttctttggggct
gggaccacaaccaatccgggaggaccagcggcaacatctagcacatcgtttgctgcgaca
ccggctccagcatcggtttctgccgctgcagcgccagagccagcgccagcaccaggtttg
ttcagctttggcggtccatctccagctagctccacgacaaaagctgcccccagcagcaac
agcaacaccttcttctttggccaaactccgacatcgacggcagccccgactacaaatgcg
acgggctccatctttggagcagcagtaacatcagcagcaccgccgctaagctttggagag
aagagagcggcatcgggtatacccgcaaacacccagacaaagcccgtaagctttggctgg
cccagcgccagcgctagccctagtcccagcctcatacccagtaatggcagcacagcccag
gtcccggccaccgccaccgccaccggcagcaccagcgtcccgacggtggtgtctggcggc
tctgttttcggcagtggatttggatcaggcttcggcagtacatcgaccgccagcacgaca
acaactccggcaccgacttcagcttttggcggcaatggagccctccccaccacgggtttc
ggctttgtgggtaactcgatggccccccattctttgcctgcgcctgcgcccggtccggct
gctatgttcagtaatgccatagcgcctgcctttggcggcagcaatggaggaggaggaggc
ttcggcggcgcgagcactgccgcagctgcaaagccatcatttaactttggaggctcttcg
gctctttcccagtcggcggccacatctggacccttcaactttggcggcagcggcaccgcg
ggcagtgcgatccccgctaagccggcctttaattttacgggctcggctacagtgtccgct
ggcacagccacaccacaggcgacgcctgcctttaacttttccgccggttcggcgactgcc
aattccctagcatcgggcgattcaacgccaaatgccaacgcaccgttccaatttagtgcc
ggtgctccggcggcagccaatatgttcgccttcaatccaccgccagctggcaacgccgcc
cagaattcacagatggcgcgccgcaagatccgcgcccccgtgcgccgtttgccgccacgg
tag
DBGET
integrated database retrieval system
