Drosophila pseudoobscura: 6901710
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Entry
6901710 CDS
T01032
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpo03036
]
6901710
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
6901710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Mesothelin
Motif
Other DBs
NCBI-GeneID:
6901710
NCBI-ProteinID:
XP_033239959
UniProt:
A0A6I8WBM6
LinkDB
All DBs
Position
X:complement(7895062..7914380)
Genome browser
AA seq
1728 aa
AA seq
DB search
MTSKKRKAFLDGVDDDDDDNFDEEDSGSDFDDDEDPDLIEVPGGGRDLNTAVTYAQNIRS
GVGVTKGPAGSNSNSNSDTKTITISNHNNNNKPTSLLRTNNNNITTSSSYNIKIGVPGTA
AAGLKGLPIVKAVGTGAGAAAGAGTVGLELTSKGSVPIIARKVGLENSLNNMPKKLTAMG
PKLPPAARTSSSVPGTITATATATATPHFNAGAGGGGGGGSASSYLSSGAGSYLNSLSTN
ELMNLAAYVASKGGSASPSHSHSSTSTSTSTSSGGASNFYASAMGGGGVGGGGSGSAGGA
SAANFNMAASLLAQMSYAGGAAGPGAGGVALPVVRPFKGAVSKVAMPPASATAAAAAGGG
AGGGAPTGGGGTKGSTSMMEAVQKLIAMNPEYLTSGIPNNVFQMFMQSMKRTPSPGTSLM
SGTSPGPMSMSMSMSMQQSMQQAQANAAAASAAAAAAYVQQEEDEVDYEEMGVAETYADY
WPAKLKLGKKHPDAVVETASLSSVEPCDVYYKMSIPNDTISSGQLSALQLESITYASQAH
DHLLPDGSRAGFLIGDGAGVGKGRTIAGIIYENFLKGRKKALWISVSNDLKYDAQRDLID
IGASRIGVHPLNKFKYAKISSDVNNNVKRGVIFSTYSALIGESNNKTGKYRSRFRQLLQW
CGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQKLPKARVVYASATGASEPKN
MAYMVRLGLWGQGTAFSNFNDFITAVERRGVGAMEIVAMDMKLRGMYIARQLSFKGVSFK
IEEVPLTKEFRKIYDQSVELWVEAMQKFTEAAELIDAESRMKKTMWGQFWSSHQRFFKYL
CIAAKVNHAVLVARESIKYGKCVVIGLQSTGEARTLDQLERDDGELTDFVSTAKGVFQSF
VERHFPAPDRNRINRILGLYDDTPTPLSAGTETAASNNNNNNNNNGKNGGRGKRKGDGVQ
TKSSQKKKKMSAGAAWQMSDSDEEAARTPSRDFGANSNSDSEGADSETFAEDDDEEDEDE
DEEDADEELDRDSDRRSVASDASSDFNPFFSGSDSDIDPWVNARSKKPTKKVQKKVKKKV
KKEKKESQPASASTPALAATTGEASASSSSVMSPAVVAALTAAKTRKSQQSTQDKIQDLL
QKKQELKGTVTPVGVNGVKLNYGPPPKDAIERACTMKEELLRKIERLGSRLPPNTLDQLI
DELGGPDNVAEMTGRRGRVVQNEDGSIQYESRTESDVPLETLNITEKQRFMDGQKDVAII
SEAASSGISLQSDRRVFNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISD
LAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRQALETVMRTIMGYEA
PLVPPPTDYNGEFFKDIAGALVGVGIIVNSESNPGVLSLDKDYNNISKFLNRILGCPVDL
QNRLFKYFTDTMTAIINQAKRGGRFDLGIVDLGAAGENVIRVRLIRFVRKHATGVAPTEL
HTVRVERGMIWQEAIDKYADLFNDNEGFYLSHQLRNQKRTAILVVVLEHQPPRNSSSSST
STTDADGGSSGSNSKKKKSRSKREIMCQIYRPNTGLQVRHESLFELEKKYRKVASDDAEP
HWTEQYDASVNTCSHAYWNGNCRNVSLGNDCEVGLRQRLYHVLAGSVLSVWGRVEHILNT
RSNSKMQVIRMKTTEGEKIVGTMIPKSCFDLLMNDLSSDSEKKEEFNH
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaaaaagcggaaagcctttttggacggcgtcgacgacgacgacgacgataat
tttgatgaagaggactctggctccgattttgacgatgacgaagatccagatctaatagaa
gtgcctggtggcggtcgcgatctgaacacagctgttacctacgcccagaacatacgtagc
ggtgtgggcgtaacgaagggtccagcgggcagcaatagcaatagcaacagcgataccaaa
accataaccatcagcaatcataacaacaacaataagcccacttccctgctgcgaaccaac
aacaataatatcaccaccagcagcagctataatattaagattggagtgccgggaacagcc
gcagccggattgaaaggattaccaatagtgaaagcagtcggaaccggagccggagccgca
gccggagccggaacggtggggctagaactgacgtccaaaggatcagtaccgataatagcc
agaaaagtaggattagagaatagtttaaacaatatgccaaagaaattgacggccatgggc
cccaaactaccacccgcagcaaggaccagcagctcggtcccgggcacaatcactgccact
gccactgccaccgccactccccactttaatgcgggggccggcggcggtgggggcggtggg
tccgccagcagctacctgagcagcggcgccggcagctacctgaacagcctctccaccaac
gaactgatgaacctcgccgcctacgtggcctccaagggtggcagtgcctcgccctcgcac
tcgcactcctccacatccacctccacatcaacctccagtggcggcgcctccaacttctat
gcgtcagcaatgggcggtggcggtgtcggtggcggtgggagtgggagtgctggtggtgct
tctgccgctaatttcaatatggccgcgtctttactggcgcagatgagctatgccggcggc
gctgcgggtccaggggcaggcggtgttgccctgccggtggtgcgtcccttcaagggagca
gtttccaaggtggccatgccaccagcgagcgccacagcagccgcagcagcaggaggggga
gctggaggaggagcacctactggcggcggtggcacaaagggcagcacatcgatgatggag
gctgtacagaaactgattgccatgaatccggaatatctgaccagcggcatacccaacaat
gtgttccagatgttcatgcaatcaatgaagcgtaccccctcgccaggcacctccttgatg
tccggcaccagtcccgggcccatgtcgatgtccatgtccatgtcgatgcagcagtccatg
cagcaggcccaggccaatgcagcagcagcctccgccgccgcagcggctgcctatgttcag
caggaggaggacgaagtggactacgaggagatgggtgtggccgagacatatgccgattac
tggccagccaaactgaagctgggcaaaaagcatcccgatgctgtggtggagaccgcctct
ctcagctctgtggagccctgcgatgtctactacaagatgtcgatacccaacgacacgatc
agttcgggacagctgagcgccctgcagctggagtccataacgtatgcctcgcaggcgcac
gatcacctgctgccggatggcagtcgtgccggcttcctcattggcgatggcgctggcgtg
ggcaagggtcgcaccattgcgggcatcatctatgagaactttctcaagggacgcaagaag
gcgctgtggatatccgtatcgaatgatctgaagtacgatgcccagcgggatctcatcgat
attggagcctctcgcattggtgtgcatccattgaataaattcaaatacgccaaaatcagc
tccgatgtgaacaacaatgtgaaacgcggcgtaatcttcagcacgtactcggccctcatt
ggggaatcgaacaacaagacgggcaagtatcgttcgcgcttccgccagctgttgcagtgg
tgtggcgaggattttgagggtctaatcatcttcgatgagtgccacaaggccaagaatctg
tgtcccgtgggctccggcaagcccacaaaaaccggacaaactgtcctcgagctgcagcaa
aagttgcccaaggcccgtgtggtctatgcctccgccacgggcgcctcggagcccaagaat
atggcctatatggtccgactgggactgtggggtcagggcacggcctttagcaatttcaat
gattttatcacagccgtagagcgacgcggtgttggtgccatggaaatcgttgccatggac
atgaagctacgcggcatgtacattgcccgccagctgagcttcaagggcgtcagcttcaag
atcgaagaggtgcccctcaccaaggagttccgaaagatctacgaccagtctgtggagctc
tgggtggaggccatgcagaagttcacggaggccgccgaactgattgacgccgagagtcgc
atgaagaagaccatgtgggggcagttctggtcatcgcatcagcgtttcttcaagtatctg
tgcattgccgcgaaggtcaatcacgcggtgctggtggcccgtgagtccatcaagtacggc
aagtgtgtggtcatcggtctgcagtccacgggggaggccagaaccctggatcagctagag
cgcgatgatggagagctaacggactttgtgtcgacggccaaaggtgttttccagtcgttt
gtggagcgacattttccggcgcccgatcgcaatcgcatcaatcgcattcttggcctctac
gatgacacaccaacgcccctgtctgccggcaccgagacagccgcctcgaacaacaacaac
aacaacaataataatggcaaaaacggtggacggggcaagcgaaagggcgacggcgtccag
accaaatcgtcgcagaagaaaaagaaaatgagcgcaggggccgcctggcaaatgagcgac
agcgacgaggaggcagcccgcacgcccagtcgggactttggggccaactcgaacagcgac
agcgagggggccgacagcgagacttttgccgaagacgacgacgaggaggatgaggacgag
gacgaggaggatgccgacgaggagctcgatcgggacagcgatcgcaggagcgtggccagc
gatgccagctccgatttcaatccgttcttcagtggcagcgacagcgacattgatccctgg
gtgaacgcgcgcagcaagaagcccacaaagaaggtccagaagaaggtcaagaagaaggtg
aagaaggaaaagaaggagtcccagccagcatccgcttccacccccgcactagcagcgaca
actggcgaagccagcgccagcagcagctccgtgatgtcccccgctgtggtggccgctctg
acggcggccaagacccgcaagtcgcagcaatcaacgcaggacaagatccaggatctgctg
caaaagaaacaagagctcaagggcaccgtcacccccgtgggcgtcaatggggtgaagctg
aactacggcccaccgcccaaggatgccatcgagcgcgcctgcaccatgaaggaggagctg
ctgcgcaagatcgagcgtctcggctcccgcctgccaccgaacacactcgaccagctgatc
gacgagctcggaggacccgacaacgtggccgagatgaccggtcgtcggggccgtgtcgtc
caaaacgaagatggctccattcagtacgagtcgcgcacggagtccgatgtgccactggag
acgctgaatatcacggagaagcagcgcttcatggacggccaaaaggacgtggccatcatc
tccgaggccgcctccagcggcatttccctgcagagcgatcgtcgggtgttcaatcagcgc
cgtcgtgtccatatcaccctggagctgccgtggtccgccgatcgggcgatccagcagttt
ggacgcacccatcgatccaatcaggtcaatgcccccgagtatatattcctcatttcggat
ctggccggcgagcgacgcttcgcctcgacggtggccaagcgcctggagtcgctcggggcc
ctcactcacggcgatcgtcgtgccaccgagacgcgcgacttgtcccagttcaatatcgac
aacaagtacggccgtcaggccctcgagacggtgatgcgcaccattatgggctacgaggcg
ccgctggtgccgccgcccaccgactacaacggggagttcttcaaggacattgctggagcc
ctggtgggtgtggggatcattgtgaacagcgagagcaatccgggcgtgctcagtctggac
aaggactacaataacatatcaaagtttctcaatcgcatcctcggctgtcctgtggacctg
cagaaccgtctgttcaagtatttcaccgacaccatgacggccatcattaatcaggcgaag
cgtggcggtcgcttcgatttgggcatcgtggatttgggcgctgctggggagaatgtgatt
cgtgtgcgtctgatacgttttgtgcgcaaacatgccaccggagtggcacccacagagctg
catacggtgcgcgtggaacgtggcatgatctggcaggaggccattgacaaatatgctgat
ctgttcaacgacaacgagggcttctatctgtcgcatcagctgcggaatcagaagcgcacc
gccatactggtcgtggtactcgaacatcagccgccacggaacagcagcagtagcagcacc
agcaccaccgatgcggatggaggtagcagcggcagcaacagcaagaagaaaaagtcgcgc
agcaaaagggagatcatgtgccagatctacaggcccaatacgggcctgcaggtgcgccat
gaatcgctcttcgagctagagaagaaataccgaaaggtggccagcgacgatgcggagccc
cactggacggaacagtacgatgcatcggtgaacacgtgctcgcacgcctattggaacggc
aactgtcggaacgtgagcctcggcaacgactgtgaggtgggtctcaggcagcgtctgtac
catgtactggccggatcggtgctgtccgtgtggggacgggtcgagcacatattgaataca
cgttccaacagcaaaatgcaagtgatacgcatgaagacgaccgagggcgagaagattgtg
ggcacaatgatacccaagtcatgtttcgatctcctcatgaacgatttgagcagcgattcc
gagaagaaggaggagtttaaccactaa
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integrated database retrieval system
