KEGG   Drosophila pseudoobscura: 6901942
Entry
6901942           CDS       T01032                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
dpo  Drosophila pseudoobscura
Pathway
dpo03018  RNA degradation
dpo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6901942
  09123 Folding, sorting and degradation
   03018 RNA degradation
    6901942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpo03019]
    6901942
   03041 Spliceosome [BR:dpo03041]
    6901942
Messenger RNA biogenesis [BR:dpo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     6901942
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     6901942
Spliceosome [BR:dpo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    6901942
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 6901942
NCBI-ProteinID: XP_002133476
UniProt: B5DKQ4
LinkDB
Position
4:17526809..17528560
AA seq 151 aa
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDAQSKSRNRTELNKNRVANSANQRTARSGNRNNFGNRSG
QLSGGSGNNALRVGASGQGNRLLAQNNKNRK
NT seq 456 nt   +upstreamnt  +downstreamnt
atgttgccgctgtcacttttgaaaaccgcgcagagccatcctatgttggttgaactgaaa
aatggagagacttataatggacacttggtgagctgtgactcttggatgaatatcaatcta
cgtgacgtaatttgcacttcaaaggatggcgaccgtttttggcgtatgcccgaatgttat
attcgcggaagtaccattaaatatttgcgtatacctgatgaggtaatcgatatggttaaa
gaagatgcacaatccaaatcgcgaaacagaacagagcttaacaaaaatcgtgttgcaaac
tcagcaaatcaacgcacggcgcgtagcggcaaccgaaataattttggaaatcgcagcggg
caattaagtggaggttctggaaataacgctctgcgagtaggcgcttcaggacaagggaac
agactacttgcccaaaataacaaaaatagaaaataa

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