Drosophila pseudoobscura: 6901942
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Entry
6901942 CDS
T01032
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6901942
09123 Folding, sorting and degradation
03018 RNA degradation
6901942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
6901942
03041 Spliceosome [BR:
dpo03041
]
6901942
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6901942
mRNA degradation factors
5'-3' decay
Lsm complex
6901942
Spliceosome [BR:
dpo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
6901942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
6901942
NCBI-ProteinID:
XP_002133476
UniProt:
B5DKQ4
LinkDB
All DBs
Position
4:17526809..17528560
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AA seq
151 aa
AA seq
DB search
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDAQSKSRNRTELNKNRVANSANQRTARSGNRNNFGNRSG
QLSGGSGNNALRVGASGQGNRLLAQNNKNRK
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgctgtcacttttgaaaaccgcgcagagccatcctatgttggttgaactgaaa
aatggagagacttataatggacacttggtgagctgtgactcttggatgaatatcaatcta
cgtgacgtaatttgcacttcaaaggatggcgaccgtttttggcgtatgcccgaatgttat
attcgcggaagtaccattaaatatttgcgtatacctgatgaggtaatcgatatggttaaa
gaagatgcacaatccaaatcgcgaaacagaacagagcttaacaaaaatcgtgttgcaaac
tcagcaaatcaacgcacggcgcgtagcggcaaccgaaataattttggaaatcgcagcggg
caattaagtggaggttctggaaataacgctctgcgagtaggcgcttcaggacaagggaac
agactacttgcccaaaataacaaaaatagaaaataa
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