Drosophila pseudoobscura: 6902747
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Entry
6902747 CDS
T01032
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo04140
Autophagy - animal
dpo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
6902747
04148 Efferocytosis
6902747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpo04131
]
6902747
Membrane trafficking [BR:
dpo04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
6902747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_HPS5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
zf-RING_5
Beta-prop_RIG_2nd
TPR_7
Beta-prop_WDR19_2nd
zf_RING_Vps8
WDR55
zf-C3H2C3
zf_RING_Vps8_fungal
TPR_1
SGL
TPR_12
zf-RING_11
TPR_10
Motif
Other DBs
NCBI-GeneID:
6902747
NCBI-ProteinID:
XP_002133261
UniProt:
A0A6I8UYC8
LinkDB
All DBs
Position
4:complement(3017392..3022334)
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AA seq
845 aa
AA seq
DB search
MAEKLPANSDSGTDSTEEEEEVEPKFKYQRIANDLKNILNADVVTCTAVHSKFLIFGTFR
GRVYLLDHQGNSVESNLSSTEQHTHKVAVNQVDVDPKGEYVATCSDDGKVNITGLFSCEN
NQNLSFGKCIKVVALDPDPKSRIRRFIVGEDKLTLYERNLLKKLKPTELCAVEGSVLSIC
WQGNFVAWASHLGVRVYDLSEKCSLGLMKWEVPSQARLENFRCHLRWSNEHTLLIGWVDT
IRICVIRKRNGIEAASSNLPGYVVDPVSTFQTTFYICGLAPLASNQLVVLGYRKERSATY
KALRPVLCVIEYKMNSSEEICTDSLTLRGFEEYTVNDYSLGCIIEENRYFIVAPKDIVVA
SLIETDDRVEWLIKHSKFEEAIDLISTHGGSLPILSVARLYINHLLTLKQYEDAAKLCLR
MLGNNKALWEEEVFKFVKCQQLRSVSAYLPTSEDCKLDPHVYEMVLYEFLKFDAKGFLNL
IKEWPPQLYDGLAVINAIHDNFRKQNANELLESLALLYSYQGDFESALRMYLKLQNKDVF
ELIRRYELYDVISKLIIPLIHLDRDRAFKILLDKKKIKPEVVVHQLEQNQEYLYWFLDEL
HKINSSNVFQRKLVELYAKYDRSKLLPFLRRSKEYVIQDALAICKREGFYPEMVYLLGCM
GGVEAVEALNIIIHSISDIEMAIEFCKEHNDNDLWNVLIDESIKQPEIVTKVFDGIVDYV
NPEIVVSKIKLGQTIPNLRESVIKMLWHYNSQKEVLCTSHEIQLDDYFDSHSEVVAFRRR
AQHVSYDHHCPQCHRPVLMKSTSHRNGLVAFKCGHIYHQLCIPGSTTIGQCGECNMGNSD
RSEEE
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaagctgccagccaatagcgactctggaacggacagcactgaggaggaggaa
gaagttgagcccaaattcaagtaccagcgcatagccaacgatctcaagaatatactcaac
gcagatgtggtcacatgcactgctgtgcattccaagtttcttatatttggcacgtttcgt
ggacgcgtctacctgctggatcaccaaggaaactcggtcgagtcgaatctgagcagcacc
gagcagcacacgcacaaagtggcagttaaccaggtcgacgtcgacccaaagggcgagtat
gttgccacatgctccgacgatggcaaggtcaacataacagggctcttcagctgcgagaac
aatcagaatcttagttttggaaagtgcatcaaagttgtggccttagatccggatccaaag
tctcgcatcagacggttcatagtgggcgaggacaaactcaccctatatgagcgcaatctc
ctcaagaagctgaaacccaccgagctgtgtgcagtcgaaggcagcgtcttgtcgatttgt
tggcaggggaactttgtggcctgggcaagccacctcggcgttcgcgtctatgatttaagt
gagaagtgctctttaggattgatgaaatgggaagttccttcgcaggcgcggctcgaaaac
tttcgctgccacttgcgctggtccaatgagcacacattgctcattggctgggtggacacc
atcaggatttgtgtgatacgcaagcggaatgggattgaagccgcgtctagcaatttaccg
ggctatgttgtggatcccgtctcgacatttcaaactactttctatatttgtggactggcc
ccactggcgtccaaccaattagtggtacttggctatcgtaaagagcgcagtgcaacatac
aaagctcttcgacccgtgctgtgcgtcattgagtacaagatgaatagcagcgaagagatc
tgcacagacagtctgacgctccgtggcttcgaggagtacactgtcaacgactacagtcta
ggctgcataattgaggagaatcgatattttattgtggctcccaaggatattgtggtggct
agtcttatagaaacggacgatcgtgttgagtggctgattaagcacagtaaattcgaggag
gctatcgacctgatatcgacacatggcggcagcttgccaattctttcagttgccaggttg
tatataaaccacttgctgacgctcaaacaatacgaagatgctgccaaactttgcctgcga
atgctaggcaacaataaagcgctttgggaagaggaggtcttcaagtttgtcaaatgtcaa
caattgcgctctgttagtgcctacttgccgacctccgaggactgcaaattggatccccat
gtctatgaaatggttttgtacgagtttctgaagtttgacgccaaggggtttcttaacctg
atcaaggaatggccgccgcagctctacgacgggttggcggtgataaatgccatacatgac
aactttcgcaaacagaatgcgaacgaattgctagaatcgcttgccctcctctactcgtat
caaggggacttcgagagcgccttgcggatgtatttaaaattacagaacaaggatgttttt
gaattaatacgtcgctatgagctctacgatgtaatttctaaattaatcattccactcatt
cacttggatcgcgatagagccttcaagatattactggacaaaaaaaaaataaagcctgaa
gtcgtcgtgcatcagctggaacagaatcaggagtacctatactggttcttggacgaactt
cataagatcaacagcagcaatgtatttcaacgaaaattagtcgagttgtatgcaaaatac
gatcggtcgaaactattgcccttcctgcgacgttccaaggaatatgtcatacaggatgcg
ttggccatttgcaagcgcgaaggtttctacccggaaatggtctacttgcttggctgcatg
ggcggagtagaagctgtagaagcccttaatatcatcattcacagtataagcgacattgaa
atggctattgagttttgcaaggagcacaatgacaatgatctgtggaatgtgcttattgat
gagtccataaagcagcccgaaatagtgacgaaggtcttcgacggcattgtcgactatgtg
aatccggagatagtagttagtaaaataaaacttggacagaccataccaaatctgcgtgaa
tcggtaattaaaatgctctggcactacaacagccaaaaggaggtgctctgcacgtcccat
gagattcaactggacgactattttgacagccattcagaagtggttgcctttcggcgacgt
gctcagcatgtatcctacgaccaccactgtcctcaatgccatcgtccagttctgatgaaa
agcacgtcccaccgcaatggccttgttgcattcaaatgtggtcatatctaccaccagttg
tgtattcccggtagtaccaccattgggcaatgcggcgagtgcaatatggggaacagtgat
cgaagcgaggaggagtag
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integrated database retrieval system
