KEGG   Drosophila pseudoobscura: 6903221
Entry
6903221           CDS       T01032                                 
Name
(RefSeq) uncharacterized WD repeat-containing protein alr3466
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
dpo  Drosophila pseudoobscura
Pathway
dpo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    6903221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpo03021]
    6903221
   03036 Chromosome and associated proteins [BR:dpo03036]
    6903221
Transcription machinery [BR:dpo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     6903221
   Coactivators
    SAGA/TFTC/STAGA complex
     6903221
Chromosome and associated proteins [BR:dpo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     6903221
    STAGA complex
     6903221
    TFTC complex
     6903221
    SAGA complex
     6903221
    SLIK complex
     6903221
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_SCAP PROPPIN Beta-prop_NWD2_C Beta-prop_LRRK2 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 6903221
NCBI-ProteinID: XP_002132922
UniProt: A0A6I8UXV9
LinkDB
Position
4:complement(28305744..28307219)
AA seq 355 aa
MSESEMFKQPKEENATGSTGSTGSTGEESLKATFVAASGLYVGGDALCASLSEETSLLAV
AKADCSVHVLRLKLHVSGANADWTHGETTTLSGHQGAVYLGSFSTDGSQLLTCSTALDMR
MWNVQSGSCLAFCRQTPSFIRGIAFISYACSYATVEDIGYASIWRADGEKIVCTKRVFQE
QELTVCIFHPKMKYVVSGSASSKIRIWDPARDRYTTDIIDFNSKSITALAFTTCGSYMVA
GVAEGQIILRNMNSKLVVCIFRQHTAAITSMAFDRDNCRLAVGSRDAKMSVWDFGAPAME
SRASDCGRVLQVRFVSDSHLVGICVNEPQFVGPQEEESIPLPLEAPTGSSSTGDF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgtcggaaagcgagatgttcaaacagccgaaggaagaaaacgcaacaggctcgacaggc
tccacaggctcgacaggcgaggagtcgctcaaggcgaccttcgtggccgcgagcgggctc
tatgtggggggggatgcactctgcgccagcctctcggaggagaccagcctgctggccgtg
gccaaggcagactgctcggtgcacgtccttcggctgaagctccatgtgagcggcgcaaac
gcggactggacccacggcgagacgaccaccctcagcggtcaccagggagccgtctacctc
ggatcgttctcgaccgacgggtcgcaactcctgacgtgctcgacggccttggacatgcgc
atgtggaacgtacagtccggcagctgtttggccttctgcaggcaaacccccagcttcatt
cgaggcatcgccttcatctcgtacgcctgttcatatgccaccgtcgaggacattggctac
gcgtccatctggagggcggacggagagaagatcgtttgcacgaagagagtgttccaggag
caagagctgacggtctgcatattccatccgaaaatgaaatacgtggtctctggatcggct
tccagcaagatccgcatatgggaccccgccagggaccgctataccacggacatcatcgac
ttcaacagcaagtcgatcactgccctggccttcaccacgtgcggctcctacatggtcgcg
ggtgtcgccgagggccaaatcatcttgcggaacatgaactccaagctcgtggtgtgtatc
tttcgccagcacacggctgccattacctcgatggccttcgacagggacaactgtcgcctc
gccgtgggcagccgggacgccaagatgagcgtctgggactttggggcaccggccatggag
tcgcgggccagcgactgtggacgcgtgctgcaggttcgcttcgtcagcgactcccacctg
gtgggcatctgcgtcaacgagccccagtttgtcgggccacaagaggaggagagtatccca
cttccactggaagccccaactggctcttcgagcacgggggatttttga

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