Drosophila pseudoobscura: 6903311
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Entry
6903311 CDS
T01032
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6903311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
6903311
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
6903311
Prokaryotic type
Archaeal type
TFB
6903311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
Sigma70_r4
ORC6
BING4CT
Motif
Other DBs
NCBI-GeneID:
6903311
NCBI-ProteinID:
XP_002132499
UniProt:
B5DHX4
LinkDB
All DBs
Position
4:17334407..17335845
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AA seq
315 aa
AA seq
DB search
MASTSRLDNNKVCCYAHPESPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSG
VDPSRVGGPENPLLSGGDLSTIIGPGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEI
SSMADRINLPKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEIC
AVSKISKKEIGRCFKLTLKALETSVDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVE
MDIVPGRSPISVAAAAIYMASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFP
EDFKFTTPIDQLPQM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacatcgagacttgacaacaataaagtgtgctgttatgcacatccagaatct
ccgttgattgaggattatcgggctggtgatatgatatgttcggagtgtggtctggttgtt
ggagaccgcgtaattgatgttggatcagaatggcgaacattcagcaatgagaaaagtggc
gtggaccccagtcgtgttggcggtccagagaatccccttcttagtggtggagatttatct
acaataattgggccaggaacgggctctgcatcattcgatgcctttggtgctccaaaatat
caaaacagacgcactatgagcagctcagaccgctctcttatatcagctttcaaagaaatt
tcatcaatggccgatcgaattaacttaccaaaaactattgtggatcgtgcaaataaccta
tttaaacaggttcacgatggaaaaaatcttaaaggtcggtcaaacgatgcgaaggcatct
gcatgtctttatattgcttgtcgacaagaaggagttccacgtacattcaaagaaatatgc
gccgttagcaagattagcaaaaaagaaatcggaagatgctttaaactaacactgaaagct
ctcgaaactagtgtggatttgataacaactgccgactttatgtgtcgcttttgtgcaaat
ttggatctgccgaatatggttcaacgcgctgctacacacattgcgaaaaaagctgtcgaa
atggacattgttccaggccgatctccaatatctgtggctgcagccgcaatttatatggca
tcgcaggcgtcagagcataagcgtagtcagaaggaaatcggtgacatagctggcgttgct
gatgtcaccataagacaatcgtacaaattaatgtaccctcacgctgcaaagctttttcct
gaagattttaagtttaccacacccattgatcagttaccacaaatgtaa
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