Drosophila pseudoobscura: 6903399
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Entry
6903399 CDS
T01032
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X2
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6903399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
6903399
03036 Chromosome and associated proteins [BR:
dpo03036
]
6903399
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
6903399
Coactivators
SAGA/TFTC/STAGA complex
6903399
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
6903399
STAGA complex
6903399
TFTC complex
6903399
SAGA complex
6903399
SLIK complex
6903399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
TFIID_NTD2
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_SPT8
WD40_like
Motif
Other DBs
NCBI-GeneID:
6903399
NCBI-ProteinID:
XP_002132278
UniProt:
A0A6I8UWX8
LinkDB
All DBs
Position
4:13260451..13263186
Genome browser
AA seq
802 aa
AA seq
DB search
MSKETKKRHSTAKKKVREAPEVDFEIECNNMETDQNIGKFNAEVGARESDFSSDEDSTSL
ESSSDGNSEMQEEPQEWSDLTFPNLRNSSPKRDKASREGQSKGIADLIGESSSIDVDEHS
GPMPSMPLFEDANKDTFQFKYPTYQDIFITSTQSNSSEAAKEPSTDYDEDLNCFSDDTHS
WESDFSDVEDKEESLYPICRKGKESWLHLPVHTVEVPFGYTSSKNGGIRSTPSGRETVGR
QATEFYDDSATEHCQEPAGKPVFKVIKQNEVFEQYEQAFHAVLSMVEAVCDRFRYDISQL
LYPLLVLAYLQMVASDNVDGAATLVKNCGKYLDDSYRPRLATLKKILRPAEVPSRARVLL
NGHYKVDILMTRDAYTQCLIHLARIPFWQQDKIMGHIRLRIYDDEELPKQRYLLGHPKLE
TMLWTLPETHGEPSKHSRRRHNANMQQLYTPPPCLDDEIKRRTEDEQRKELSREHLPSVY
LYTAMTGQEKVLCATFSEEFNMVALGTSVSVVHVFSVDSSKPLVDMTLEKGESDRRVKRT
LYGHQGAVYGCSFSPDDRYIVSCSRDTNVRLWCLRSWSCMVIYTGHLAPVYCVVYAPLGF
YFATASEDGTARIWAQSKKQAARLLSGHLASVEVCLFHPNRYYLASGSSDCTVRVWHVVK
GRQVRVLSGHKARVTSLAFSTCGSYLASGGDDHLVIVWDLPAERMIRYLSHHTATIYSCA
FDMDNNILVVAGGDARLSVWDFDRLVQQSGSRKSSSSKLASKELLLKSYDSYEGPIYKVS
FSSGNLILAVRVEPPRTPKKTT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaacaaagaagcgtcattccacggcgaaaaaaaaggtccgagaagcgccg
gaggtggatttcgagatagagtgcaacaatatggagaccgatcagaatattggaaaattt
aatgccgaagtgggcgcgagagaatcggacttctcgagcgatgaggacagcacttcactg
gaatccagctccgatggcaactccgaaatgcaagaagaacctcaagaatggagtgacctg
acatttcccaacttgagaaactcttcgccaaaacgtgacaaagcatcccgtgaaggacag
tcgaagggcattgcagatttaatcggggaatcgtcgtccatagacgtggacgagcatagt
ggcccgatgccgtcaatgcctctgttcgaggacgcaaataaggacacatttcagtttaaa
tatcccacctaccaggatatctttatcacctctacccaatcaaactccagcgaagctgcc
aaggaacccagcacggattatgacgaggatttgaattgcttttctgacgacacacacagc
tgggaatccgacttcagtgatgtggaggacaaggaggaaagtctttatcctatttgcaga
aaaggaaaggaaagttggttgcacctgccggtgcacacagtcgaggtgccttttgggtat
accagctcgaagaatggtggcatacgatcgaccccaagtgggagggagacggttggcagg
caggcaaccgagttctacgatgacagtgccaccgaacactgccaggaacccgccgggaag
cccgttttcaaggtcatcaagcagaacgaggtgttcgagcagtacgagcaggccttccac
gccgtgctgtccatggttgaggcggtgtgcgatcgcttcagatacgatatatcgcagctg
ctgtatcctctgctggtcctggcctatttgcaaatggtggccagcgacaacgtggacggg
gccgcgaccctcgtgaagaactgcgggaagtacttggatgactcctacaggccgcggctg
gcaacgctgaagaaaattcttaggccagcggaggtgccatccagggcgcgagtgctgctc
aacggtcattacaaggtggacatcctgatgacccgggacgcctatacgcagtgcctgatc
cacttggcgcgcattccgttttggcaacaggacaaaatcatgggccacatccgcctccgg
atatacgacgacgaggagctgcccaagcaacgttacctcctgggacatcctaagctggag
accatgctgtggactcttcccgagacgcacggagaaccctccaagcactctcgacgccgg
cacaacgccaatatgcaacaattgtacacgccccctccgtgtcttgatgatgagattaag
cgccggacggaagacgagcagcgcaaggagcttagtcgggaacacctgccctcggtctac
ctatacacggccatgactgggcaggagaaagttctgtgtgcgaccttctccgaggagttc
aacatggtggcactgggcacgtccgtctccgtggtgcacgtcttctcggtggattcctcg
aagcctctggtggatatgacgctcgaaaagggagagtcggacaggcgggtaaagcgcacc
ttgtacggccaccagggggctgtctacggctgctccttttcccccgacgaccgctacatt
gtcagctgctcgagggacaccaacgtgcggctgtggtgcctccgctcctggagctgtatg
gttatctatacggggcacctggccccagtctactgcgtagtgtatgcccccctgggcttc
tactttgccaccgcctcggaggatggcacggctcgaatctgggcccagagtaagaagcaa
gcagctcgcctcttatccggccacttggccagcgtggaagtgtgtctgttccacccgaac
aggtactacctggcctccgggtcgtcggactgcactgtccgcgtctggcacgtggtgaag
ggccgccaggtgcgtgtgctcagcggccacaaggcgagagtcacgtctctggccttctcc
acgtgcgggagctacttggcctcaggaggcgacgatcacctggtaattgtctgggacctg
cccgccgagcgaatgatccgttacctgagtcaccacacggccacaatctactcctgcgca
ttcgacatggacaataatatcctagttgtggccggcggggatgctcgcctgtccgtctgg
gactttgaccgcctcgtccagcagtctggatcccgtaaatcctcgtcttccaaattggca
tcaaaggagctgctactaaaatcgtacgacagttacgagggacccatctacaaggtctcc
tttagcagcggcaacctcatattagccgtccgcgtggaacccccaagaactcctaagaaa
acaacataa
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