KEGG   Drosophila pseudoobscura: 6903523
Entry
6903523           CDS       T01032                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
dpo  Drosophila pseudoobscura
Pathway
dpo03030  DNA replication
dpo03410  Base excision repair
dpo03420  Nucleotide excision repair
dpo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    6903523
   03410 Base excision repair
    6903523
   03420 Nucleotide excision repair
    6903523
   03430 Mismatch repair
    6903523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpo03032]
    6903523
   03036 Chromosome and associated proteins [BR:dpo03036]
    6903523
   03400 DNA repair and recombination proteins [BR:dpo03400]
    6903523
DNA replication proteins [BR:dpo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    6903523
  DNA Replication Termination Factors
   ELG1-RFC complex
    6903523
Chromosome and associated proteins [BR:dpo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    6903523
DNA repair and recombination proteins [BR:dpo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     6903523
  Check point factors
   HRAD17(Rad24)-RFC complex
    6903523
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_lid_RFC1 DUF815 AAA_11 AAA_assoc_2 DEAD AAA_14 RCF1-5-like_lid AAA_16 RuvB_N ResIII AAA_24 AAA_5 AAA_7 Gp44_lid AAA_30 Mg_chelatase AAA_19 nSTAND3 nSTAND_NTPase5
Other DBs
NCBI-GeneID: 6903523
NCBI-ProteinID: XP_002132399
UniProt: B5DHM4
LinkDB
Position
4:complement(17276650..17278107)
AA seq 333 aa
MCDNNETALRKPWVEKYRPYSLDDLISHDEIILTINRFISQKQLPHLLFYGPPGTGKTST
ILACARQLYPPALFKSMVLELNASDDRGIGIVRGQILNFASTRTIFCDTFKLIILDEADA
MTNDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFAPLSPDKMIPRLEQI
VQSEDIKITENGKKALLTLSKGDMRKVLNVLQSTAMAFDVVNEDNVYMCAGYPLRQDIEN
ILKALLSGHNFEVSFQNVDVAKSARGLALEDIITELHLIVMRLEFPISVMNELVVKLAHI
EERLTKGCTDIANTAALVSAFFICRDMVSLHKE
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgtgtgataataacgaaactgctttgcgcaagccatgggttgagaaatatcgcccatat
tcattagatgaccttatatctcatgacgaaataattttaacaatcaatcgcttcattagt
cagaagcagcttccccatttacttttttatggaccaccggggactggtaaaacaagcacc
atattggcgtgtgcccgacaactttacccgccggcgctctttaagtccatggtactagag
cttaatgcttccgatgataggggtattggaattgtacgtggccaaatccttaactttgca
tctacgcgaacaattttctgcgatacttttaaacttattatattagatgaggcagacgcc
atgactaacgacgctcaaaacgctttacgacgcatcattgaaaagtatacggacaacgtc
cgtttttgtataatttgcaattatctaagcaaaataatcccggcgctacaatcgcgatgc
acccgttttcgttttgcgccgttgtcccctgataaaatgatacctaggttggaacaaatt
gttcagtcggaagatataaagattacagaaaatggaaagaaggcactgcttactctttca
aaaggcgatatgcgaaaggtactgaacgttctgcaaagcactgctatggcatttgatgtg
gtcaacgaagataatgtgtacatgtgtgctggctatcctttacggcaagatattgaaaac
atattgaaggcgttgctttcggggcacaactttgaggtttcatttcaaaatgttgacgtt
gccaagagcgctagaggtctagcgctcgaagacataatcacggagttgcatttaattgta
atgagacttgaatttccgatttcggtaatgaatgaattggtggtgaagcttgcacacatc
gaagaacgtttaacaaaaggttgcactgatattgcaaatacggcagcgctggtttctgct
ttttttatatgccgggacatggtttcattgcataaggaataa

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