Dreissena polymorpha (zebra mussel): 127831340
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Entry
127831340 CDS
T08834
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127831340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127831340
03012 Translation factors [BR:
dpol03012
]
127831340
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127831340
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127831340
Translation factors [BR:
dpol03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127831340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
OB_NTP_bind
DEAD
HA2_N
nSTAND3
AAA_19
NPHP3_N
AAA_22
AAA_14
ATPase
AAA_16
Spt6_S1
Motif
Other DBs
NCBI-GeneID:
127831340
NCBI-ProteinID:
XP_052212267
LinkDB
All DBs
Position
5:72975059..73026996
Genome browser
AA seq
1045 aa
AA seq
DB search
MSKSLCRFFTIQCLTKIAFRLDSHRVFSVMAGQGAEGWDEKEPGRQWGHQSGGRHSGNHV
NRGRRNYHRGRNREDERDKKVNRWGPSEGDDSYRSRGSARGHGGRGRGGRPPGLKGKDIG
MYYAQLSKQKTEQRIKDQRAAVTLQGDQKRVITSLLHDIQASRECPPQPDRYTEERDDGR
NSRLSPAEEENYDGLQGSASCDVGHGRGNRPPGLSGKQIGMYYVGESKEKAERRMADQSN
RYSEESEDDDSLEEYEEEVESEGPSSGSATNVSHEDPTVTEVLQMQMGEDLLVSDNSDIA
GFQTATTSWDNARISADFAAKQTTTLYQDMQEFRNKLPAYTDREAIVDLISSNKVVVLSG
ETGCGKTTQVPQFILDEFISQNRGAECHIICTQPRRISAISVAERVAAERGEKCGESVGY
MIRLEHKLPRDAGSILFCTTGILLKMLEGDKSLSRATHIILDEIHERDLLSDFLIIVLKD
ILTSRPDLKLVLMSATLNAEAFSKYFDNCPMINIPGYTFPVEEFLLEDVIEMLHYEAPYT
MQARQPRRRDLIAQREMEEREVWLRNLEGGVNTDKRYSRHTINQLQSLDFNKVDTELIYQ
LIWHISLHKKEGAILVFVPGWGDINDVYKKLMANMAFKSASHFRIFPLHSLMPTINQREV
FERPPPGVRKIVIATNIAETSITIDDVVYVIDGGRIKVKGFSPDTNMASLDSQLVSKANA
RQRRGRAGRVQPGECYHLYSGYQASIMDNYLAPEILRTRLEELCLTIKLLNLGKIVPFVQ
KAMQPPSLAAVESAIVNLQDLNALDKEENLLPLGKHLARMPLDPHTGKMILYGAMFKCLD
PILTIAASLNFKDPFFAPLEKKAEADQARMKLAENCLSDHITLVKAYNKWERCRKRGTHR
QFCYDNFLSDSTLVMLRKMRDQLAEVLHELGFLRERHINQSEANVNSGNESLVKAIVCAG
LYPNIGMIGKLPKNKWSQIQFQLRSGRCKLFPGSVAREIRDPRACWVVYHKIMKTSDVWM
YDCSVVTPYSLLFFGGDIKKMNAST
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagtctttgtagattctttacaattcagtgcttgacgaagatcgcttttcgt
ttggactcacatagagtattttcagtgatggcaggtcaaggagcagaaggctgggatgag
aaagagccaggtcggcagtggggtcaccagtctggaggtcgtcacagtggtaatcatgtc
aacaggggtcgcaggaactaccacaggggtcggaatagggaagatgaaagagacaaaaaa
gtaaaccgatggggcccatcagagggtgatgactcttacagatcgcgagggtctgcgagg
ggtcatgggggtcgaggaagagggggcagacccccagggttaaagggcaaggacataggc
atgtactacgcacagttgtcaaaacagaaaactgaacaaaggataaaagaccagagagca
gctgtgaccttgcaaggggatcagaagagggtcataaccagtctactccatgatatccag
gcaagcagagaatgtcctccccagcctgatagatacacagaggaacgtgatgatggcaga
aatagcagattgagcccagctgaagaggaaaactatgacggacttcaaggttcagcaagc
tgtgatgtgggacatgggagggggaacaggccacctggtttaagtggcaaacagataggc
atgtactatgttggagagtccaaggagaaagctgagcgaagaatggcagatcagtcaaac
agatatagtgaggaaagtgaagatgacgatagcttggaggaatatgaagaagaggttgaa
agtgaggggcccagttctggaagtgcaacaaatgtgagtcatgaagatccaacggtgaca
gaagttctccaaatgcagatgggggaagacttgcttgtatcggataacagtgatattgct
ggatttcaaactgccaccacatcctgggacaatgcaaggatatctgctgactttgctgcc
aaacagacgaccacactttaccaggacatgcaggaattcagaaacaaactgcctgcctac
actgacagagaagccattgttgatctgataagctccaacaaggtggtagtattgagtggt
gaaacaggctgtggaaaaacaacacaggtcccacagtttattttggatgaattcatatct
cagaacagaggggctgaatgccacatcatctgtacccaacccaggagaattagtgcaata
tctgttgcagaaagggttgccgcagaaaggggagagaaatgtggggagtcagtgggctac
atgattcgtctggaacacaagcttccgagagatgctggctctattctcttttgtacgact
ggaatcttgttgaaaatgctggaaggggacaagtcgttatcacgagccacgcacattatc
ctggatgagattcatgaacgtgacctgctgtctgactttctgatcatcgtactcaaggac
attctgacctccagacctgacctgaaactcgtgttgatgagtgcaacactcaacgctgag
gccttctccaagtattttgataattgccctatgataaacattcctggctacacgtttcct
gttgaagagtttctactggaggatgttatagaaatgcttcactatgaggccccgtacaca
atgcaggcacggcagccgagacgcagggacttgatcgctcaacgagagatggaggagaga
gaggtgtggctacgtaacctcgaaggaggggtcaacactgacaaaagatattcgagacat
accataaaccagctacagagtctggacttcaataaagtggacactgagctcatataccag
ctgatatggcacatatctttacacaagaaggagggggccatactggtgtttgttccagga
tggggtgatatcaatgatgtgtataagaaactcatggcaaacatggcatttaagtctgca
tcccacttcagaattttccccttacattctctgatgcctaccatcaaccagagggaggtg
tttgagaggcccccaccaggagttaggaagattgtcatagcaaccaatattgccgaaacc
agtataaccatagatgatgttgtgtacgtgattgatgggggtcgtatcaaggttaaaggg
ttctcacctgataccaacatggcctctctggattcacaactagtatcaaaagccaatgcc
agacaacgcaggggtagagcgggacgagtacagcctggtgaatgctaccacctgtacagt
ggctaccaggcctctatcatggacaactacctggccccagagatactgagaactagactg
gaggagctctgcctcactatcaagctgttaaacttggggaagattgtgccttttgtccag
aaggcgatgcagcctccatcactagctgctgtggagagtgccatagtcaacttgcaagat
ctgaatgcacttgacaaggaggagaatctcctgccccttgggaagcacctggcccgcatg
ccccttgacccccacacgggcaagatgatcctatacggggccatgtttaagtgcctcgac
cccatactgaccatcgcagctagcctcaacttcaaggaccccttctttgcacctttggag
aaaaaagctgaggctgaccaggctagaatgaagctggcagagaactgtctgagtgaccat
atcacacttgtgaaagcctacaataaatgggagcggtgtcgtaagcgagggacccatcgc
cagttctgctatgacaacttcctgtctgactccacacttgtgatgctgaggaagatgaga
gaccagttagcagaggtccttcatgaactgggattcctccgggagagacatataaaccag
tcagaggccaatgtcaactccgggaatgagtccctggtgaaggcaatcgtatgtgctggg
ctttacccaaatattggaatgattgggaaactaccaaagaacaaatggagtcagatccag
tttcagctgagatcagggcggtgcaagctgttcccagggtctgttgccagggagatcaga
gaccctcgggcctgctgggtggtctaccataagatcatgaagacctcagatgtctggatg
tatgactgcagtgtggtgacaccatacagcctgttgttctttggaggagacatcaagaaa
atgaatgcaagtacctga
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