Dreissena polymorpha (zebra mussel): 127832256
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Entry
127832256 CDS
T08834
Name
(RefSeq) regulator of nonsense transcripts 2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03013
Nucleocytoplasmic transport
dpol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127832256
03015 mRNA surveillance pathway
127832256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127832256
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127832256
mRNA cycle factors
P-body specific factors
127832256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
127832256
NCBI-ProteinID:
XP_052213546
LinkDB
All DBs
Position
5:2485707..2546750
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AA seq
1337 aa
AA seq
DB search
MSGRSEDRRTPKSGTDNKSSGRGSSRSGSGGKSYREQRYQAGRGSGRGPRGGGASDRDRD
SPAGAASSSKTSENGGGDIKKTSNESCPPLKALSAADLEAQWQKEEEERQAEERRKQEEE
EMKKKAEEAERLRKEAEERRIEEERLQKIAEEKKSIEDYVADIQARNEEKLQLRKDNLSA
EERRPEESFFTRLDSSLKKNTAFVKKLKVLSESQKQSLTKEFNSLNLTKYVGEAAASITE
AKLKMTDISCAVYICSIMHQRYAEFAPSLLENWQKYFPTKKDEKISNPSKYRVDLRFFAD
LVSVGLFRDKEGLLLLANQLAILINNDKEEHNNLAILTSFCKHCGDDYAGLLPRKYRLLG
ERFGLEIPRSKVLLKERQKGCRNLLGDYFSSLCKHLITDHKNLKNMEKQNRKTLLTKGEL
SCERKERYEEAYNNYQKLYSSSQVLADILDEDMPELPEDETKDDDGGFDIYNPLKNLEFQ
YEGDTAVWEDEETRTLYENLPDLKASIPGILYRESEAAEKEAVKEEDTSLEEDLDSLDIE
DVEREMETQRQLEEQEKSDQGSPGAKEGAVKEEETTEQLLPPVVEEYVNSKKYDEDTGSL
MKIQFEAYAQSLPTCVNRDLIDKAAIEFCMNYNTKNNRKKLVRALFTVHRTRYDLLAFYS
RFTATLYPCMPDVANDLVTLLKGDFRWHVRKKDQINIESKLKTVRFIGELVKFKLFPKTE
ALHCLKMLLFDFSHHNIEMACSLLESCGRFLYRSPESHHRTRVYLDVMMRKKSALMLDTR
YTTMIENAYYYSNPPDTPQVARKVRPPMQEYIRKLLFRDLSKVTTEKVLRQMRKLNWDES
ETAFYATKCLIAVWNVRFNSIHCAANLLAGIAPYHETVAIQVVDGVLEDIRLGMEINHPK
YNQRRVSCAKFLGELYNYRMVESAVIFKTLYTFITFGVSTNEDEDMSVLDPPDHLFRIRL
VCVVLETCGQYFDKGSSKKKLDCFLVYFQRYYWFKRKSPMWTELHPFPVDVENLMQDTLE
IIRPKLKLVAGFEEACKACEELENEFKSKIASLLPIVETEDTEAGDGEEGGLTTIQETEE
AMEFSQSERTYEEEESERSQSQGDQTGSQSQSQLNQHTGSEGEEVEGEEGEEEEGYSDDE
GEDMDTDHEDRQQDDQVILKNLPKRIECQEDDDFMAAFDKMVEDTSKARNNESLKVPQFD
VPVPVNVKTTKKKFDLNPEPAEENIIKFTLITKRGNKQQFSDLNVPVTAEFATKFKEREE
QERVEKERMKQVVLGIHERQEEEDYQEMLASLNRPMLINNNRERRVRYQHPKGAPDADEI
FGSNTKSKLKCVTILKR
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgttcagaagacagacgcactccaaagtctggcactgataacaaaagttca
ggcagaggttcctcaagatctggaagtggagggaagagttacagagaacagcggtaccag
gcgggtagaggaagtgggcgaggcccaagagggggcggggccagtgacagggatagggat
tcacctgcaggggcagcgtcttcaagtaaaacaagcgaaaatggtggcggtgacataaaa
aagaccagtaacgagagctgtccccctctgaaagccctgtcagccgctgacttagaggca
cagtggcagaaggaagaagaggagaggcaggctgaagaaaggaggaaacaggaggaggaa
gaaatgaagaagaaggcagaggaagcggaaagattgaggaaagaggcggaagaaagaaga
attgaagaagaaagactacagaaaatagcagaagagaagaaatctatagaagattatgtc
gcagacattcaagctagaaatgaggaaaaactacagttaagaaaagataaccttagtgct
gaagaaagaagacctgaagaaagctttttcactcgacttgactcaagtttgaagaaaaac
acagcctttgtgaaaaaattgaaagttctcagcgagtcacagaagcagagtctcacaaag
gagttcaacagtctcaacctgacaaaatatgttggagaggcggctgcatcaatcactgag
gccaaactgaagatgacagatatcagctgtgctgtatacatctgcagcataatgcatcag
cgctacgcagagttcgctccaagtcttttggaaaactggcagaaatatttcccaacaaaa
aaggatgaaaagatcagcaaccccagcaagtaccgtgtagacctgcggttctttgctgac
ctggtctcagtgggcttgttcagggacaaggagggcctactcctactggccaatcagctt
gcgatactcatcaacaacgacaaggaggagcacaataacctcgccatcctcaccagcttc
tgcaagcactgtggagatgactacgcaggtctcctaccgcgcaagtacaggctcctaggg
gagaggtttgggctggaaattcctcgaagcaaggtactgttgaaggaaagacagaagggc
tgccgcaatctgctgggtgattacttcagctccctgtgtaagcacctcatcaccgaccac
aagaacctgaaaaacatggagaaacagaacaggaaaactctgctgactaagggagagctg
agctgtgaaagaaaggagagatatgaggaagcctacaacaactaccagaagctatactcc
agttcacaagtcctagcagacattctagatgaggatatgccagagttgccagaagatgaa
acaaaagatgatgatgggggttttgacatttacaatccactcaaaaacctagagtttcag
tatgaaggtgacacagcagtgtgggaagacgaggaaacaagaacattgtacgagaaccta
ccagatctcaaagcatccataccagggatcctgtacagggagagtgaagcagctgagaag
gaggctgtcaaagaagaagacacaagcttggaggaagatcttgatagcctggatatagag
gatgttgagcgagagatggaaacacagagacagctggaagagcaggagaagtctgatcag
gggtccccgggggccaaggaaggggccgttaaggaggaggagacaactgaacagctccta
ccacctgtagtggaagagtatgtgaattcaaaaaaatatgatgaggacactggcagtctc
atgaagattcagtttgaggcatatgctcagtcgctgcccacgtgtgtaaacagagatctc
attgataaggcagctattgagttctgtatgaactacaacactaaaaacaatagaaagaag
ctggtgagagctctctttacagttcacagaaccaggtatgacctgctagcgttctactcc
cgttttacggccacattgtacccctgtatgccggacgtggccaatgatctcgtgactcta
ctcaagggagacttccgatggcatgtgcgcaaaaaggatcagatcaacatcgagtccaag
ctgaaaactgttcgcttcattggtgagttggtgaaattcaaactgtttcccaaaacagaa
gctctccactgtctcaagatgctgttgtttgatttttcccatcacaacattgagatggcc
tgttcacttctggagtcctgcggcagatttctctacaggtcgccagagtctcatcatcgc
accagagtctatctggatgtgatgatgaggaagaagtcggccctgatgctggacacgcgc
tacaccaccatgatcgagaacgcctactactacagcaacccgcccgacacaccccaggtg
gccaggaaggtgcgaccacccatgcaggagtacatcaggaagctcctcttcagggatctc
tccaaggtcaccaccgagaaggtgctgagacagatgaggaaattgaactgggacgagtca
gagactgcattttatgccaccaagtgcctgatagcagtgtggaatgtgcgcttcaactcc
atacactgtgcagctaacctgctggctgggatagcaccataccatgagacagttgccata
caggtggtggatggagtgctggaagacataagacttggaatggagatcaaccatcccaag
tacaaccagagacgtgtgagctgtgccaagttcctcggggaactctacaactaccgcatg
gtcgagtcggccgtaatctttaaaaccctctacacattcatcacatttggagtttctact
aatgaagatgaagacatgtctgtgttggaccctcctgatcacctgttccgtatccgactt
gtgtgtgtcgtactggagacttgcggtcagtactttgataagggatccagcaagaagaaa
ctagactgtttcctggtgtactttcagcgttactactggttcaagaggaagtctccaatg
tggacggagttgcatcccttccctgtggacgtagagaacctgatgcaggacacgctggag
atcatcagacccaagctgaaactggtggctggcttcgaggaggcatgcaaggcctgtgag
gagctggagaatgagttcaagtccaaaatagcttccctacttccaattgtggagacagaa
gacacagaggcgggtgacggggaggagggagggctgaccactatacaggagacggaggaa
gcaatggagttcagccagtctgagaggacgtatgaggaggaggagagtgagcgcagtcag
agccagggagaccagacaggctcacagtcacagtcacagctcaaccagcacacgggctct
gaaggtgaggaggtggagggtgaagagggggaggaggaggaggggtacagtgatgatgag
ggtgaggacatggacacagaccatgaggatcgtcaacaagatgaccaggttattctgaag
aatttaccaaagcgtatcgaatgccaggaggacgatgatttcatggcagcgtttgacaag
atggtggaagacacgtccaaggcaaggaataacgagtccctaaaggtgccacagtttgat
gtccctgttccagtgaatgtgaagaccaccaagaagaagtttgatttgaatcctgaacct
gcggaagaaaacattatcaaatttacattgattacaaagaggggaaacaagcaacagttc
tcagatttgaatgtgccagtcaccgcagaatttgccaccaagttcaaagaaagagaagag
caagagcgagtggagaaggagaggatgaagcaggtcgtgttgggcatccatgagagacag
gaggaggaggactatcaagaaatgctggcatccttgaatcgcccaatgctgatcaacaac
aaccgagaaaggcgagtccgataccagcatccaaagggagccccagatgcagatgaaatc
tttggctccaatacaaaaagtaagctgaaatgtgttactatcttaaaacggtga
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