Dreissena polymorpha (zebra mussel): 127832257
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Entry
127832257 CDS
T08834
Name
(RefSeq) F-box DNA helicase 1-like isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpol04121
]
127832257
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127832257
Ubiquitin system [BR:
dpol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127832257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
F-box-like
AAA_30
F-box
AAA_22
ResIII
Motif
Other DBs
NCBI-GeneID:
127832257
NCBI-ProteinID:
XP_052213555
LinkDB
All DBs
Position
5:3484458..3531018
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AA seq
1328 aa
AA seq
DB search
MGTSHILDLTVEYIEFLVVQFIRFCVFLISSKHETSIVANMGDKSTLEEEFGECIENVHD
YSYCESVDIEIGKVHSSAAKRNSIEVARNSKRKRLHMDSSECFEQGNKSLASGSPGLSLS
VNRDASRGLYPVIRNRKRKVDVHDERHNFARINTENSTFANARTGFVAASEMYNIAVNKS
PIKETPDNFDNQSFRKVPKQIKQIQNQGSILNFFMQCPSKLECPSGTVFNTSTKPITQVM
KDSMESTTSIDAMVPKLNIEMNNDKIPASGRSVLYSPIKKAGNDCDSTCIYISNDNIPAS
GKSVKYLPVNKAGNDCDSTCIDISDDKIPALGRSVMYSPIKKAGNDRDSTCIYISDDSDS
NSRFSSQGTNKTLQNPKSDVVKQLFNAQRSLLKDPKHKSKGKKQTSKSFTSISKTEIESV
KNEAAKYFLGDSFDMNSVFNSESDVEGTLSPIPQSNVKTKVLPKAVISDKYGLLGTGNYP
RDVDEKINYFEHLPPEVVENIFCQLPMLDLCLNSNRVCLQWNQIIGSEKFVPWKKLYHKL
KADHGTSRVEVRQMMVKYGMKFPSNYLAALIRYMKDFKPVTAANMLECLSKHRRYSLAGQ
LIDERLEDCKTHGAPNPWCVISLLVILAHSVEEIQEIIGCLSCSVSQCTSLEILECLYCI
STFLFAFKLAQKGQIWSGMHYRLYYALYLYENASCSSAGDLQSIMGQNKGGQQSLMKYSS
SSDSVRLTHEQMRIVKYMARPEEVIKIVAFAGTGKTTTLVRYTQLRPGKKFLLVVYNKSV
CDYAKTKFPPNVECRTGHSLAFGAVGRRYTKKLGNLKVYTLTQTLRARKGENLFLQAKFV
LSTLEAFFASADDHISVSHVPSTKLNEKTGQKEQIDIQTKQNLVSDANIIWAKMKDFNEN
SVFMTHDGYLKLYQLSRPRLSKYDCILIDEAQDLTPAITDILLGQPQGKILVGDPHQQIY
SFRGAVNAMEMIQADTVFYLTQSFRFGPEIAHVAMSCLEVLKKETKKTLVGSGKKSTVDG
TSLGQVAIISRCNFTVFSEAVKKCCYTQEECKVAFVGGTDNFGFPMLMDMYSLLCPQNGS
KEGYEIKNKFIKMFPNFKELEKFAVKSMDVELQGKIKIVKTYHTNLPILIRKIDSKCVKD
ERTADYVFSTAHKAKGLEFSTVRLTDDFMAGDQQSMFVTLQNLGLDMEDDEREERGMQDV
IAVRADKQISEDENNLLYVAVTRAKNALQMSKTLMSVLKLAGEQFVYPVASDKLRESGQV
FRCRGTHAEFKPHCVTLQKKEITLGDGVLLKGGLYSPALLTEDHHNFAELLGLTAAEKQK
QKKEQDAL
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgggaacctcgcacattttagacttgacagttgaatatatagaatttcttgttgtgcaa
tttataagattttgtgtattccttatttcgtcgaagcatgaaacaagtattgtcgcaaat
atgggtgacaaatcaactttagaggaagagtttggtgaatgcattgaaaacgtccatgat
tatagctattgtgaaagtgttgatatagaaattggtaaagtccactcatcagctgctaaa
agaaatagcattgaagtagcccgcaattctaaaagaaaacgcttgcatatggacagttcc
gaatgctttgagcaaggtaataagtcgttagcaagtggttccccaggtttatcgctttct
gtcaatagagatgccagcaggggattgtatcctgtcatcagaaacagaaaacgaaaggtt
gatgtgcatgatgaaagacacaactttgcaagaattaatacagaaaattcaacatttgct
aatgccagaactgggtttgtggctgcaagtgaaatgtataacattgctgtgaacaagtct
ccaataaaagaaacacctgacaattttgataatcagtcatttagaaaagtaccaaaacaa
attaagcaaatacaaaatcaagggagcattttgaacttcttcatgcaatgcccatctaaa
ttagaatgtccatcaggaaccgtcttcaatacttcaactaagcctataacccaggttatg
aaagacagcatggaatccacaacgtccattgatgcaatggtaccaaaactaaacattgaa
atgaataatgataaaataccagcctcgggaaggtcagtcctgtattcgcccataaaaaaa
gctgggaatgactgtgactccacctgtatttatatcagtaacgataacataccagcctcg
ggaaagtcagtcaagtatttgcccgtaaataaagctggaaatgactgtgactccacctgt
attgatatcagtgacgataaaataccagccttgggaaggtcagtcatgtattcgcccata
aaaaaagctgggaacgaccgtgactccacctgtatttatatcagtgacgatagtgattca
aacagtcggttctcctcacaaggaaccaacaaaactttgcaaaatcctaaaagtgatgtt
gtaaagcagctgtttaatgcacaaaggagtttacttaaagatcccaagcacaaatctaaa
gggaagaagcagacatcaaaatcatttaccagtatttcaaaaactgaaattgaaagtgta
aagaatgaagctgcaaaatattttcttggtgacagttttgacatgaattcagtttttaat
tctgaatctgatgtggaaggtactttaagtcccattcctcagtctaatgtcaaaacaaaa
gtgttgccaaaagctgtgatatctgataaatatggcctcttaggaactggtaattatcca
agagatgtagatgaaaaaataaattattttgagcatctccctccagaagttgttgaaaat
attttttgccagttaccaatgctggacttgtgtctaaacagtaatcgtgtatgtttgcag
tggaatcaaataattggaagtgaaaagttcgtgccatggaaaaagctgtatcataagcta
aaagctgaccatgggaccagcagggtagaggttcgccagatgatggtgaaatatggcatg
aaattcccatccaattacttagcagctttgataaggtacatgaaagacttcaagccagtc
actgctgccaacatgctggaatgtttgtccaaacatcgcagatacagccttgcaggacag
ctgatagatgaacgcttggaagactgcaaaactcatggggcacccaacccatggtgtgtg
atcagcctattggtgatactggcacatagtgtggaggagatacaggagatcataggctgc
ctgtcctgcagtgtgtcccagtgtacttcattagagatactggaatgtctctactgcatt
tccacatttctctttgccttcaaactggctcagaaaggccagatttggagtgggatgcac
taccggctgtactatgctctgtacctgtatgagaatgcgtcctgctccagtgcaggagat
ctacagagcattatgggccagaacaagggagggcagcagtcactcatgaaatacagctct
tcatccgattctgtgagacttacccatgagcagatgagaatcgtcaagtacatggcccgc
cctgaggaagttatcaaaattgtggcttttgcaggtactggtaagaccacaacactggta
cgatacacccagttgagacctggcaagaagttcctactggttgtctataacaagtctgtt
tgtgactatgcaaaaacaaagttccctccaaacgttgagtgtaggactggccattcattg
gcctttggagcagtgggacgaagatacacaaaaaagctaggaaatctgaaggtgtacact
ctgacccagacgttgagagcacgcaagggagagaacctattcctgcaggccaagtttgtg
ttgtctaccctggaggcattctttgcctcggcagatgatcacatctctgtgagtcatgtc
ccaagtacaaaactaaatgagaagaccggacagaaggaacagatagacattcaaacaaaa
cagaatttggtttctgacgctaatataatctgggcgaagatgaaggatttcaatgagaat
agtgtatttatgacgcacgatgggtacctgaagctgtaccagctgtctaggccacgcctc
tccaagtatgactgcatactcatagatgaggctcaggatctcacaccagccataacagac
atcctgttggggcagccccagggcaagatcctggtaggggacccccaccagcagatctac
tcgttcagaggggctgtcaacgccatggagatgattcaggctgacacggtgttctatctc
acacagtcgttcagatttggaccagagattgcacacgttgccatgtcttgcctcgaagtg
ttgaagaaggagacaaagaaaacactggtgggaagtggcaagaaaagcacagtggacggt
acatccttaggacaggtggccattataagtcgctgtaacttcacagtgttcagtgaggcc
gtgaagaagtgctgctacacgcaggaggaatgcaaagtggcgttcgttggaggcactgac
aattttggttttccgatgttgatggacatgtattctttgctgtgtcctcaaaatgggtca
aaagagggctatgagatcaagaacaagttcatcaagatgttcccaaactttaaggagttg
gagaagtttgcagtaaagtccatggacgttgaacttcaagggaaaatcaaaattgtgaaa
acctaccacaccaatctgcccatcttgatcaggaaaatagacagcaaatgtgtgaaagat
gaacgcactgcagattatgtgttcagcactgcccacaaggcaaaaggtctggagttcagc
acagtgagacttacagacgacttcatggcaggcgatcaacaatccatgttcgtaaccttg
cagaatctgggcctggatatggaagatgatgagagggaggaaaggggaatgcaggacgtg
atagctgtgagggctgacaaacagatatctgaagatgagaacaatctcctgtatgtggct
gtaacccgcgctaagaatgccctgcaaatgtcaaaaactctgatgtcagtgctgaaatta
gcaggggaacagtttgtgtatcctgtagccagtgacaagctgcgtgagtcagggcaggtc
ttcagatgtcgagggacccatgcagagttcaagccacactgtgttactcttcagaaaaag
gagatcactttgggagatggtgtgttgttgaaaggaggcctgtatagtcctgctctgctc
actgaggatcaccacaactttgcagagctgcttggactcactgcagctgagaaacagaag
cagaaaaaggaacaggacgctttgtga
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