Dreissena polymorpha (zebra mussel): 127833815
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Entry
127833815 CDS
T08834
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
dpol
Dreissena polymorpha (zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpol03021
]
127833815
03036 Chromosome and associated proteins [BR:
dpol03036
]
127833815
Transcription machinery [BR:
dpol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127833815
Chromosome and associated proteins [BR:
dpol03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
127833815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Tex_YqgF
HHH_9
SH2
HHH_3
S1
Spt6_S1
Tex_N
Motif
Other DBs
NCBI-GeneID:
127833815
NCBI-ProteinID:
XP_052215253
LinkDB
All DBs
Position
1:68954617..69016304
Genome browser
AA seq
1721 aa
AA seq
DB search
MDFFENEAEVSDRSSSAEDSDVGSGSDSEMMRKKKSKKEKKKKKIISDDDDDDEEDIDEE
AIAAEMKDFINEDVEEDEPEEEEEEGAGGEKRKHESEEEDDQLEDEDYDLIEENLGIKVK
RSKKLKRIKRVITDDEDSEQEGEKEGDERERIANELFEGDEEEEGEDDDARSRMTKAETE
AQDLTVEDSEDEDELGDFIVGDDGQPIRGKKKKRHIIHSDALLQEAQDIFGVDFDFDEFK
DYAGEESEEEEDEYIDDDELEGEEGAPKKEKKSRPKRGLKASATYEPEALARAFMTEKDN
IVRNTDMPERFQLRSIPVKETEEGELEEESEWIYKQAFRMPTISTQTFLEQDGGSYGYSK
KGPTMVEKIKKALDFMRNKHHEVPFIAFYRKEHVEPDLNINDLWKVWHWDEKWMRVRNRK
QNLIRLFERMQKYQYEVNSDPEKVLEANVRTLSEDDIERVRKVETMEELHDIYNHFLLYY
GSDIQKMRDMERKKKREERAEEGGEGENREVDDDADNIKQASRKSGYTICVKNKLGEMAS
QFGMSPEQFGENVRDNYTRHEVDQCPMEPLELAKDYVSGQFPTAEEVMLGARHMVAMQLA
HDPLVRQCVRQAYFERARLHVTPTKKGIKEIDEAHPCYPIKYLSNKPVRDLKDEQFLRLT
ESETEKLLEISITMDEKTDNRNIQNYYEDVKSLYYRDEFSHLVQQWNTQRTLALERALTK
ILYPQMEKELRLKLITEAKEGILKACCRKLYNWLKVAPYQIEQHMEDDYDLDDNEPGLRV
LGLAFIAEKDTTAFGCMVNGEGEVTDFIRLPNLTKRIRSQRPMEREEKEKDMEKLKEFIE
TKKPHVIAVTAENYDAMMIMDDIKKVIAELEQEAQLPPINVELVDNELAMVYANSSRADE
EFREYPAVLRHAVCVARRLQDPLIEFAQLCNQDEEILCLKYHPMQDSISKEELLSALNLE
FVNRVNEVGVDVNRAISNPHTSVLVQFICGLGPRKGAALLRTLRQSSTRLENRTHLVTMC
RMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPEYYEWARKMAVDALEYDDTAE
DANPAGALEEILESPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELNHRYKDLRTPY
RSPTNEERFNMITKETPDTFYIGKLMMVRVMGIAHRKPHGEQLDQADPVRNEDTGLWQCP
FCNKNDFPELSEVWSHFDNGSCPGSAVGVRCRLDNGCTGFIHIKNLSDKKVTDPMERVKV
KYQKAFLLFCTHKPGMTVHSRIIKIDIDRFTVDLTTKTSDLLDKDSQWKPPKDLYYDAER
EKSEFEKEEEKKKIQARQTYIKRVIAHPNFHNISYKECEKLLAPMDQGDCIIRPSSKGAD
HLTVTWKMADGVLCHIDVMEQGKENAFSLGKALLINGETFEDLDEIIARHIQPMASYARD
ILNFKNYMDTDGGKKEIVDRKLYEEKKKAPSKIPYYLSVAKNYPGKFLLSYMPRNKPRSE
YVTVTPDGFRYRHKSFHSVNSLMRWFKEHFRDPLIGTPSGRTPMVGHTPSFNLQGVDAAA
IQRATKGLPANIYNTLAQVAGVTPGITPRVTPGFTPAAFTPRTGYTPHTPQVGGSGTASG
SYRTGLGATPLMTPAGQATPSYQPTPKAQWPGATPRTPRSSGQSGSKSSQGPGTDWAKAA
EMWAKHKKLAPGTPKSPGNRYSPRGRGDQSPAGDATPLFDE
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atggacttttttgagaatgaagcggaggtgtctgatcggtccagcagtgctgaagattca
gatgttggttcagggtctgactccgagatgatgagaaagaagaaatcaaagaaggaaaag
aagaagaaaaaaatcatctctgatgatgatgatgatgatgaagaagatattgatgaagaa
gcgatcgcagcagagatgaaggactttattaatgaagatgttgaagaagatgaacctgaa
gaagaggaggaggagggagcgggaggagaaaaaaggaagcatgagtcagaagaagaggat
gatcaacttgaagatgaggattatgatctgattgaagaaaatcttggcattaaagtgaaa
aggtccaaaaagcttaagcgcattaagagagtgataacagatgacgaagacagtgagcaa
gaaggagagaaggaaggagatgaaagagagaggattgctaatgaattgttcgaaggggat
gaggaagaagagggtgaggatgatgatgctaggtcacgaatgacgaaggcagagacggaa
gcacaggaccttactgtggaagattcagaagatgaagatgagcttggtgactttattgtc
ggagatgatggacagcctatcagaggaaagaaaaagaagagacacattattcattcagat
gcactgttgcaagaagcacaggatatatttggtgttgattttgactttgatgagttcaaa
gattacgcaggagaggaatcagaagaagaagaagatgagtacattgatgatgacgaactg
gaaggagaagaaggagcaccaaagaaagagaaaaagtcacgaccaaaaaggggactgaag
gcttctgcaacatacgagcccgaagccttggcgagggcattcatgacagagaaagacaac
attgtgcgtaacacagacatgccagagaggttccagctgcgcagcatccctgtcaaggag
acagaagaaggggagttggaggaggagtcggagtggatctacaagcaggcctttcgcatg
cccaccatctccacacagacattcttagagcaagacggtggcagttatggctacagcaaa
aaaggacctacaatggttgaaaaaattaagaaagctctcgactttatgaggaataaacat
catgaggtaccgttcatagctttctacaggaaggagcatgttgagcctgatctcaacatc
aatgacctctggaaagtgtggcactgggacgaaaagtggatgagagtgcgcaatagaaag
caaaatctgatccgactgtttgagcgcatgcagaagtatcagtacgaagttaattctgat
cctgaaaaagtcctggaggcaaatgtgagaacacttagtgaggacgatattgaaagagtt
cgaaaagtggagacaatggaagaactgcacgatatttacaaccacttcctgctgtattat
ggttcggacattcagaagatgcgtgacatggagcgtaagaaaaagcgagaagaacgggca
gaagagggaggggaaggggaaaatcgagaagtggatgatgatgctgacaacatcaagcag
gcctccagaaagtctggatataccatctgtgtgaagaacaaacttggtgagatggcctcc
cagtttgggatgagcccggagcagtttggagagaacgtacgagacaactacacgagacac
gaggtggaccagtgtcccatggagccactggagctggccaaggactacgtcagtggtcaa
ttcccgacagcagaggaggtaatgctgggagctcgtcacatggtggccatgcaactggca
catgaccctctggtgcggcaatgtgtgagacaggcgtactttgagagggccaggctccat
gtcacacccaccaagaaaggcatcaaggaaattgatgaagcgcatccatgctacccaatc
aagtatctgtccaacaaaccagtacgggacctcaaagatgagcagtttctgcgactaacg
gagtcagagactgaaaaactgcttgagatcagtatcaccatggatgagaaaactgacaac
agaaatatacagaattactatgaggatgtgaaatctctctattacagggatgagttcagt
cacctggtgcagcagtggaacacgcagagaaccctggccctggagcgggcgctcacaaag
atcctctacccacagatggaaaaggaactcaggctcaaacttatcactgaggccaaggag
ggcatattgaaggcgtgctgtcgtaagctgtacaactggttgaaggtagctccctaccag
atagagcagcacatggaagatgactatgacctggatgataacgagcctgggctccgagtg
ctgggcctcgcgttcattgctgagaaggataccacagcgtttggttgcatggtgaacggg
gagggggaggtgacagactttattcgcctgcccaatcttaccaagaggattcggtctcag
cgacccatggagagagaggaaaaggaaaaggacatggagaagttgaaagaattcatcgag
accaagaagccacatgtgatagctgttacagccgagaactatgatgccatgatgatcatg
gatgacataaagaaagtgatagcagagttggagcaggaagctcagttgcctcccatcaat
gtagagcttgttgacaatgagctggccatggtctacgcaaacagctcaagagctgatgag
gagtttcgggagtaccctgcggtgctacgtcacgctgtgtgtgtggctcgcaggctgcaa
gatccgctcatagagtttgctcagctctgtaaccaggacgaggaaatcctttgtctcaag
taccaccctatgcaggattccatctccaaggaggagctactcagtgctctgaacctggag
tttgtgaatcgagtcaacgaggtgggggtggatgtgaaccgcgccatttccaacccacac
acgtcagtccttgtgcagttcatctgcggactggggcccagaaaaggggctgcattgctc
aggaccctgaggcagagcagcacaaggttggaaaatcgaacccatctagtcaccatgtgt
agaatggggccaaaagtgttcatcaattgtgctggcttcataaagattgacacaaactca
ttgggagacagcacggaggcgtatgtagaagtactagatggttcccgcgtgcatccagag
tactacgagtgggcccgtaagatggctgtagacgcactggagtacgacgacacggctgag
gacgccaacccggcaggtgccctggaggagatcctggagagtcctgagcgtctcaaggac
cttgaccttgatgcttttgcagaggagcttgaaagacagggctatggtgacaagcacata
acactgtatgatatcagagctgagcttaatcacaggtacaaggacctaaggaccccatat
cggtcccctaccaatgaagaacgcttcaacatgataacgaaggagacaccagatacattc
tacataggtaagctgatgatggtgcgtgtgatggggattgctcaccgcaagccccatggg
gaacagctggaccaagcagacccagtgaggaatgaggacacggggctctggcagtgcccc
ttctgtaacaagaatgacttcccagagctcagtgaggtctggagtcattttgacaatgga
agctgccctggctctgctgtgggtgtgcgttgtcgactggacaacggctgcactggcttc
attcacataaaaaatctcagcgataagaaagtgacggacccaatggaaagagtcaaggtc
aagtaccagaaagcattcctgctattctgcactcataaacctggcatgacagtgcattct
cggatcataaagattgatattgatcggttcactgtggacctcaccactaaaacatctgac
ttgctggataaggacagtcagtggaagcctccaaaggatttgtactatgacgcagagaga
gaaaaatcagaatttgaaaaggaggaagaaaaaaagaaaatccaggccaggcaaacgtac
atcaagcgtgtgatagcccaccccaacttccacaacatcagctacaaggagtgtgagaaa
ctgctagccccaatggaccagggcgactgtattatcagacctagcagtaagggagcagac
cacctgacagtgacttggaagatggctgacggggtactgtgtcatatagatgtcatggag
caaggcaaggagaatgcattcagtcttggcaaggccctgctcataaacggagaaacgttt
gaggacctggatgagataattgctcggcacattcagccaatggcgtcctatgcacgtgac
atcctgaacttcaaaaactacatggacacagacgggggcaagaaggagattgtggacaga
aaactgtacgaggaaaagaagaaggctccatccaagattccatactatctaagtgttgct
aagaactaccctggtaagttcctgctctcctacatgccaagaaacaaaccgcgttcggaa
tatgttactgtgacacctgatggtttccgctatcgccacaagagtttccattccgtgaac
tcgttgatgcgttggttcaaggaacacttccgagatccactgattgggactccaagcggc
cgcactcccatggttgggcacacaccgtcgttcaatcttcaaggtgtggatgctgctgcc
attcagcgggccacgaagggtcttcctgccaacatatacaataccctggcacaggtcgct
ggggtcacccctgggatcactcccagggtcacacctggattcacaccagcagctttcact
cctagaacgggctacacaccacacacaccacaggtgggcgggtctggaacggcttcaggc
agttacaggactggtttaggggcaacgcccctgatgacaccagctggccaggccacgccc
tcataccagccaacccccaaggcccagtggcccggggccactccacgcacacccaggagc
agtggacagtcaggcagcaaatcttcacaaggtcctggtacagactgggccaaggctgca
gaaatgtgggccaagcacaagaagctggcacctggaacacccaagagcccagggaaccga
tattcacccagggggcggggcgaccagtcaccagctggagatgccacgcccttatttgat
gaatga
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