Dreissena polymorpha (zebra mussel): 127834093
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Entry
127834093 CDS
T08834
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127834093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpol04121
]
127834093
Enzymes [BR:
dpol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127834093
Ubiquitin system [BR:
dpol04121
]
Ubiquitin ligases (E3)
HECT type E3
127834093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Arm
ARM_ARMC5
DSHCT
HEAT_2
Motif
Other DBs
NCBI-GeneID:
127834093
NCBI-ProteinID:
XP_052215654
LinkDB
All DBs
Position
6:42893143..42971740
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AA seq
1678 aa
AA seq
DB search
MMSESESEEADMGRLQALLEARGLPSQLFGALGPRMHQLLHRTMGSNSSMNKAQQLLQGI
QSTGNEDQQLSSVIEMCQMLVMGNEDTLGGFPVKQVVPALISLLQMEHNFDMMNHACRAL
TYMMEALPRSSAVVVEAVPVFLEKLQVIQCMDVAEQALTALESLSKKHSKAILQAGGIAA
CLMYLDFFSINAQRCALAITANCVLNMTPEEFHYIRDSVPMLSSRLSHQDKRSVESVCLC
FARLVDNYQNDRRILKEIAVQGLLTYIQQLLVVSPPVISTGTFVMVIRMLAIMCGNCPDL
AVVLLRQKVADTLCYLLVGTSEEATKTIELVSRTPQELYEIVCLIGELLPMLPSDGIFSV
DALMRKGSLFSVDAVAWQWKDDRNMWHNYSPIDSKIIEAAHQSGEDEVSLSTFGRAYTID
FYSMQQINEDTGTARAVQRKANPTAGNTQGSGSGSETDLERCDSRAEVLREDADLASAFI
KTLFAVLYEVYSSSAGPTVRHKCLQTLLRMIFFSNNDLLKDVLKSQPVSSHIAAMMASVD
LKVVVGGIQMAEVLMQKLPDIFNVYFRREGVMHQMKHLTQIDPTAVTPVKSPQPSPVSPS
LFGGATLVAIGTGSAHAGSLLSVTSSETSCSAGSGEVGGQDTDSSHSVSVTDGSASNVSG
NLNHADEKDHGLAQMRLSDVLKRKKPPKRPVRKGNKKEDSPELSLKSSSSRARSRLNPKE
KSSSGSSSKMSFLPSLNPRTWGKLGGSASASSSSTDRPLLSKYPGVKQLPPPISNNKDKI
KAWIKEQAVRFLEQYFSEETQSGSHPALSTLNKLCTATENLSLQEDCGLEPLKEISLIMM
DSDVSPFEVIHSGLVNKFLQYLTTMEGAVPRDVRIRRFLHVFLNCPSPDIMYMKDIKMPD
GPDTCSMLPLVQKLMACMHQLEQFQVKVHDLPGGSGSTGRGSNALKFFNTHQLKCLLQKH
PSCTTLKQWKGGPVKIDPLALVQAIERYLIMRGYGRLKETDDDGSDDDNSDEEVDDTMAA
VFISQGQARHRLEFLIGDHVLPYNMTVYQAIRQYSNCTDREGEETDTDSENPVGHASVWV
QTHTIWYRPAPENEDPAHASPKKTKSEVKAAKSSSKKKSEDLWTDGNCPGFVPALNAYLT
EKLPAFVTVQDPSVDVIALLRILHAFNRYWATVYEVPSYYAKPVLGKSDFVSSKLTAKAN
RQLQDPLVIMTGNLPSWLAEIAAAAPFLFPFDTRQLLFYATTFDRDRALMRLQDNSLDTS
NNDSSERVAPRLDKRKRVVNRTDLLKQAEKLMEDLATSRAMLEIQYENEVGTGLGPTLEF
YALVSKELQKSDLDLWRGDVVQEKDASGNETGNQYVFSPCGLFPKPLARNTKAAVVNKMK
AKTKFLGKLMAKSLMDSRMLDIPLSEVFYKWLLGQEHSLTSSDLQYLDPVLSRSFNQLEE
VLRQKKRILADKSHTEESRRLALENLSIDGCSLENLDLDFTLPGHPNIELKKGGKDKQVI
LDNLEEYLQLLTHWSLVEGVSRQFESLREGFESVFSLSSLQSFYPEELELLFCGNQEDVW
DTKVLMECCRPDHGYTHDSRAVKFLYEILSSYSPDEQRLFLQFVTGSPKLPVGGFRTLNP
PLTIVRKSFEGADNPDSFLPSVMTCVNYLKLPDYSSVEVMRERLAIAAREGQLSFHLS
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagagagtgagtcggaggaggcagatatgggacgactgcaagccctgttggag
gctagaggtttgccgtctcagctatttggagccttgggtcccagaatgcaccagttgctg
cacagaactatgggcagtaatagctctatgaacaaagcccagcagctgcttcaaggtatc
cagtcgacaggcaatgaggaccagcagctctcatcagtcatcgagatgtgccagatgctg
gtgatgggtaacgaggacacgctggggggtttcccggtgaagcaggtggttcccgcgctg
atcagcctgctccagatggagcacaactttgacatgatgaatcacgcatgccgcgccctt
acctacatgatggaagcactgcccaggtcatctgcagtcgtcgtggaggcggtccctgtg
ttccttgaaaagttgcaagttatccagtgtatggatgtggcagagcaggccctgacggcg
ctggagtccctgtccaagaagcacagcaaggccatactgcaggcggggggcatagctgca
tgcctgatgtacctggacttcttcagcatcaacgcccagcgctgtgccctggccatcact
gccaattgtgtcctcaacatgaccccagaggagttccactacatacgagactctgtgccc
atgctcagctctaggctctctcatcaggacaagagatctgtggagagcgtgtgcctgtgt
tttgcccgactggtggacaactatcagaacgaccggcgcatcctcaaggagatagccgtc
cagggactcctcacctacatacagcagctgcttgtggtgagcccccctgtgatatctacg
ggaacgtttgtgatggtaattcgcatgctggccatcatgtgtggaaactgccctgacctg
gcagtggtgctgctgaggcagaaggtagcggacactctgtgctatctgctggtaggcacg
tctgaggaggctacaaagacgatagagcttgtgtccaggacaccccaggagctgtatgag
atagtctgtctcattggggagctgttgcccatgctcccgtcagatgggatcttttccgta
gacgccctaatgaggaagggctctctgttcagtgtggatgccgtggcctggcagtggaag
gacgacagaaacatgtggcacaactactcccccatcgatagcaagatcattgaggcggcc
catcagtcaggtgaggacgaagtgagcctatccacattcggtcgagcctacaccatagac
ttctactcaatgcaacagatcaacgaagacacaggcacggccagagcagtacagaggaag
gctaaccccacagctggcaacacacagggatcaggctctggttcggagactgacctagaa
cgctgtgattcgcgcgctgaagtgctgcgtgaggacgcggacctcgcctctgccttcatc
aagacgcttttcgccgtactctatgaggtctacagctcatctgctggaccgacagttcga
cacaagtgtttacagacgcttctgaggatgattttcttcagcaacaatgatctcttgaaa
gatgtactcaaatcgcaacctgtctctagtcacatagcagccatgatggcctcggtggat
ttgaaagtggtggtggggggcatacagatggccgaagtgcttatgcagaagttgccagat
attttcaatgtctacttccgaagagaaggtgtaatgcatcaaatgaagcacctgacgcag
atagaccctacggcagtgaccccagtcaagtcccctcagccaagccctgtcagcccttcg
ctgtttggcggggccaccctggtagccataggaaccggctctgctcacgcagggtccctg
ctgagcgtgacctcaagcgagaccagctgcagtgctggttctggtgaggttggaggtcag
gacacggactcgagtcacagcgtcagtgtaactgacggcagcgcgtctaacgtgtctggg
aacttgaaccatgctgatgagaaggaccatggcctggcacaaatgagactgagtgatgtt
ctgaagcgtaaaaagccacccaagcgtccagtgaggaagggcaacaagaaggaggacagt
cccgagctcagtctcaagtcctccagcagtcgagcccgcagtagactcaaccccaaggag
aagtctagcagcgggtcgtcatccaagatgtccttcttgccgagtctaaaccctcgcacc
tggggaaaactgggcgggtccgcgtcagcatcgtcttcgtctactgataggccgctgttg
tcaaagtaccctggtgtcaagcagttacctccccccatatccaataacaaggacaaaatc
aaggcttggatcaaagaacaagctgtgcggttcctggagcagtatttctctgaggagacc
cagtctggcagccaccccgccctgtccacactgaacaagctatgcaccgccacggagaat
ctcagtctgcaggaggactgtggtctggagccactgaaagaaatctcgttaatcatgatg
gacagtgatgtgtcgccattcgaggtgatccacagcgggctggtgaacaagttcctgcag
tatctcaccaccatggagggggccgtcccacgagatgtcagaatacgacgcttcttgcac
gtcttcctcaactgtccgtccccggacatcatgtacatgaaggacatcaagatgccagac
gggccggacacatgcagcatgctgcctctcgtacagaagctcatggcctgcatgcaccag
ctggagcagttccaggtcaaagttcacgaccttcccggggggtcagggtcaaccggcagg
gggtcgaacgccctcaagttcttcaacactcatcagctgaagtgtctactgcagaagcac
ccgtcatgtacgacccttaaacagtggaagggtggtccagtgaagattgaccccctggcg
ctggtacaggccatagagcgctacctcatcatgagagggtatggcagactcaaggagaca
gatgatgatgggagtgatgatgacaattcggatgaggaagtggacgacacaatggctgca
gtgttcatcagccagggccaggcccgacacaggctggagttccttatcggggaccacgtg
ctgccctacaacatgacggtgtaccaggccatacgtcagtacagcaactgcacagaccgc
gagggcgaagagacagacacagactctgagaaccctgtcgggcacgccagtgtctgggtg
cagacacacaccatatggtacagaccggcccctgagaatgaggaccctgcacacgccagc
ccaaagaagaccaagtctgaggtgaaggctgccaagtcaagtagtaagaagaagtctgaa
gatctctggaccgatgggaactgcccaggttttgtgccagccctcaatgcctacctgaca
gaaaagctgcctgcctttgtgacagtacaggacccctctgtggatgtgatagccctgctg
cgtatcctgcatgccttcaacagatactgggccactgtgtatgaggtaccctcgtattat
gcaaaaccagtgttggggaagtcagatttcgtgagctccaagttgacagcaaaggcaaac
cgccagttgcaggacccccttgtgatcatgacaggcaacctgccctcatggctggcagag
attgcggctgccgccccattcctgttcccgttcgacacccgtcagcttctgttctatgcg
acaacgtttgaccgtgaccgcgcgttgatgaggctgcaggacaactcactggacacgtca
aacaacgactccagcgagagagttgctcccaggctagataagaggaagcgagttgtaaat
cgcacagatttgctcaagcaggctgagaagttgatggaagaccttgccacctcgagggct
atgctggagatacagtatgaaaatgaggttggcacaggccttggtcctacactggagttt
tatgcccttgtttccaaagagttacagaagtctgaccttgacctctggaggggcgatgtc
gtacaggagaaagatgcttcaggcaatgagacgggtaaccagtacgtgttctccccctgc
gggctgttccccaagccccttgctcgcaacacgaaggccgcagtggtcaacaagatgaag
gccaagaccaagttcctcggcaagctgatggccaagtccctcatggactccagaatgctg
gacatcccgttgagcgaggtgttctacaagtggctgctgggccaggagcacagcctgacc
tccagcgacctccagtaccttgaccccgtactctcaaggtcattcaaccagctggaggaa
gtgctccgacagaagaagaggatactggccgacaagtctcatactgaggagagtcgtcgg
ctggccctagagaacctgtccatagacggctgcagcctggagaacctggacctggacttc
acgctgcccggccaccccaacatcgagctcaagaagggcggcaaggacaagcaagtcata
ctcgacaacctcgaggaatatctccagttgctgacccactggagcctggtggagggcgtg
tcaaggcagtttgagtcgcttagggagggcttcgagtccgtgttctctctgtcctctctg
cagagcttctaccctgaggagctggagctgctgttctgtggtaaccaggaggatgtctgg
gacaccaaggtgctcatggagtgctgtcggcccgaccacgggtacacccacgacagccgc
gcagtcaagttcctctacgagatcctctcctcctactcgcccgatgaacagaggctcttc
cttcagtttgtgacggggtccccgaaactccctgttggaggtttccgaactctcaatccc
ccgctgactatcgtacggaagagcttcgaaggggcggacaatcctgacagcttcctgccg
tctgtgatgacgtgtgtgaattatctcaaactgcccgactactcttcagtggaggtgatg
cgagagaggcttgcaatagcagcaagggaaggacaactctcattccacttgtcatga
DBGET
integrated database retrieval system
