Dreissena polymorpha (zebra mussel): 127834236
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Entry
127834236 CDS
T08834
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127834236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpol03036
]
127834236
Chromosome and associated proteins [BR:
dpol03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
127834236
REST complex
127834236
Heterochromatin formation proteins
Other heterochromatin formation proteins
127834236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
127834236
NCBI-ProteinID:
XP_052215873
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All DBs
Position
6:complement(60373900..60440029)
Genome browser
AA seq
1396 aa
AA seq
DB search
MQRPHIEDNAGRRVTQGEINQVLSAGRLIQSAGLGGGPRFESEVMSGGLQFPGLQNFAGA
AGHAHQAPIQLPGGISGPGAGGMTPGHGLGGAHPTPAQVHTAQVQGQQQQFQRLKVEDAL
SYLDQVKLQFGNQPQVYNDFLDIMKEFKSQTIDTPGVINRVSNLFKGHPELIVGFNTFLP
PGYKIEVQANEINVHQPGQQTVSISTLNQMAQAAAACQQHKPIQSHVANPPSHTNPPSQH
SYHQQPRPAAVESPAGQPNAQPGQQPVEFNHAINYVNKIKNRFQGQPEIYKAFLEILHTY
QKEQRTIKEGGLGIPHYPFQGTVPPGHKPLTEAEVYAQVAKLFQNQEDLLAEFGQFLPDA
NGSSNYSGYTFSHFQSLFGSDSVLGVRNDHSSTVKKPGFASKPPGPKISNQLRRSISSSA
QPPIIKKPRLGTLKDVSLAEAGKWGTLNEYAFFDKVRKALRHQEVYENFLRCLVLFNNEV
ISRAELVQLVQTFLGKFPELFKWFKDFLGYKESGGMVESIPQNATGKERISGELAMEIDY
ATCKKYGASYRALPKTYPQPKSTGRTSLCKEVLNDTWVSFPSWSEDSTFVTSRKTQFEEH
IYRCEDERFELDVVIETNLSTIRVLESVQKKLTRMAPEDAAKFKLDNCLGGTSEVLHRKA
IQRIYGDKAPDIVDGLKKNPVVAVPLVLRRLKAKEEEWREAQRNFNKIWREQNEKYYLKS
LDHQGINFKQNDIKAIRSKALLNEIETIYDERQDTDAGTPHLSYVYKDKSILDDASGLII
HHMKRQTGIHKDEKQKIKVLLKQFLPDLFFTARQELSDDEMEKDDEEMDTDEGGTDRDKD
SRSDSEKSDKKRLSDTETPTVRVKTEKTDSASEPVKSKTETKVEVKEEKMDTGDVSMDAS
DIKTESETEKATPEDEEDDDVYTLFFVNNNWYLLFRLHQLLCERLHKIYVHSQTIAEEEA
QCRKDRKESTAVALRLKAPSEIEPDEYFPYFLDMVKNVLDGNLESTSYEDQLREMYGIHA
YIAFTMDKLVQNIVRQLQHIVVEENCHRVSELFNDERRNRATGGRIATRHQRQPMENSYQ
KRAEQCLSEENCFKVTIHKMECRLSIEMLDSDHEPPDDPVEVERWSEYVEKYVNNEDTAT
EELKEMLNRKPVFLRRNVRQVRKKNKEQQGEEEKAKRDDSDKMSEKSSRSVGGKSDKSDK
MQSNEKERETKKEEGEKEEMDIDKEESSTDKGNRHNEDRDGDDNADNEDDNDDDDKEDDN
DDDEIIGKKGPRSGREIDIIDNTECKFNVNSFKLVYVINSESYLYKRMALKRARESHKDL
SLKLHGKFSAWVDKWKKAHVTREQETKCSKWLNGDSGNNRPCITTKGDIDVTDKSPYYKY
TKYRVKFLKDPESELE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaccacacattgaagacaacgcggggcgtagagtcactcaaggggagattaac
caagttcttagcgctggaagattgattcaaagtgctgggcttggaggtggtccaaggttt
gagtctgaagtgatgtcaggtggactacagtttcctggcttacagaatttcgctggggct
gccggacatgcccatcaggcccctattcagcttccaggggggatatcaggccctggggct
ggtggtatgaccccggggcatgggctgggcggagcacacccaacacctgcacaggtgcac
acagcgcaagttcaaggtcaacagcaacagttccagaggctaaaagtagaggatgccctg
tcctacctagaccaggtgaagttacagtttggtaatcagccccaggtctacaatgatttc
ttggacatcatgaaggaatttaaatcgcagactattgacacccctggcgtcatcaaccgt
gtgtcaaacctgttcaaaggccacccagagcttattgttggcttcaacacgttccttcca
ccgggctacaagattgaggtacaggccaatgagatcaatgttcatcagcccggccaacag
accgtgtccatatccacgctgaatcaaatggcccaggctgctgctgcttgtcaacagcat
aaacctattcagagccacgtggccaacccgcccagtcacaccaacccgccttcccaacac
tcctaccaccaacagcctcgacctgccgctgtggaaagcccagcgggtcaaccaaatgca
caaccgggccagcaaccagtggagttcaaccatgccattaattacgtgaacaagatcaag
aaccgtttccaggggcaaccagagatctacaaggcgttcctggagatactacacacatat
cagaaagagcagaggacaattaaagaagggggattgggtataccccactaccccttccag
ggcactgtgccccctggccacaagcccctcacagaggcagaagtgtacgcacaggtggca
aagcttttccaaaaccaggaagacctgcttgctgagtttgggcagttcttgccggatgca
aatgggtcgtcaaattattctggatatactttttcacattttcagtccctgtttggctcg
gactcagtcctgggtgtaagaaacgaccactcgtccacggtgaagaagccaggatttgca
agcaagccgccaggaccaaaaatttccaatcagcttagacgttctatatcatcaagtgcc
cagcctcctattattaagaagccgcggttgggaacattgaaagatgtatcgctggctgag
gctggaaaatggggtacactgaatgaatacgctttctttgacaaggtcaggaaagcttta
cgccaccaagaggtttatgagaacttccttcgttgtttggttctgtttaacaacgaggtc
atttcacgagcagaacttgtacaactcgtacagacgtttttgggcaaattcccggagctg
ttcaaatggttcaaggactttctggggtacaaggagtcaggtgggatggtggagtctata
ccacagaatgccacgggcaaggagcgtataagtggagaactggccatggaaatagattat
gcgacctgtaagaagtatggagccagctacagggccctacctaagacataccctcagcca
aaatccaccggcagaacatcactgtgcaaagaggtgcttaacgacacatgggtatcattt
ccttcatggtccgaggactcgacgtttgtaacgtcacgaaaaactcagtttgaagaacat
atctacagatgtgaggatgaacgatttgagcttgacgtggtaatagagaccaatctctcc
acaatacgagtgctagaatctgttcagaagaaattgacgagaatggcaccagaggacgct
gctaagtttaaactcgacaactgccttggagggacgtcagaagttctacacagaaaagca
atacagagaatttatggggacaaggcaccagatattgttgatggactgaagaaaaaccca
gtggtggctgtccccttggtccttaggaggttaaaagccaaagaagaagaatggagagag
gcccagcgaaatttcaacaaaatctggcgtgaacagaacgaaaaatattacctgaagtct
ctagaccatcagggtatcaactttaagcagaatgatatcaaggccatacgttctaaggca
ctgctgaacgaaattgagaccatttatgacgagcgtcaggatacagacgcaggcactcca
catctcagctatgtctacaaagacaagtccatcctggacgatgcctctgggctcatcatt
catcacatgaaaagacaaacaggaatccacaaagatgagaaacagaagatcaaggtttta
cttaaacagtttttgccagacctgttcttcactgcaagacaggaacttagtgatgatgag
atggaaaaagatgatgaagaaatggacacagacgaaggtgggactgatcgcgataaggac
tccagatcagacagtgagaagtcggacaagaaacgattgagcgacaccgaaacaccaaca
gtccgggtcaagacagagaaaactgacagtgcttcagagccagtgaaaagcaaaacagag
acaaaagtcgaggtaaaagaagaaaagatggacaccggggatgtctcaatggatgccagt
gatatcaaaacagagtcggagacagaaaaagcaaccccagaagacgaggaagatgacgat
gtgtacactctgttcttcgtcaacaacaactggtacctgttgttccgcctgcaccagcta
ctgtgtgagagactacacaagatctacgtgcactcacagaccattgcagaggaggaggcc
cagtgtaggaaggataggaaggagtccaccgccgtagcattgagactgaaagctcctagt
gagattgagccggatgagtatttcccgtactttctggacatggtgaagaacgtgttggac
ggaaacctagagagcacgagttacgaggaccagctgagagagatgtatgggatacatgcc
tacattgccttcaccatggacaagctggtgcagaacattgtcagacagctgcaacacatt
gtggtagaagagaactgtcacagagtgtctgaactgttcaacgatgagcgaaggaaccgc
gctactgggggtcgtattgctacacgtcatcagcgacagccaatggaaaacagctatcag
aagagggcagagcagtgcttgagcgaggaaaactgctttaaagtgactatacacaagatg
gagtgccgactgagcatagagatgctggactcggaccatgagccccctgacgaccccgtg
gaggtggaacgctggagcgagtatgttgagaaatacgtgaacaacgaggacactgccact
gaagaactcaaggagatgctcaacaggaaacctgtgttcttaaggagaaatgtacggcaa
gttcgtaagaaaaacaaagagcaacaaggagaagaggagaaggccaaaagagatgactct
gataaaatgtcggaaaaaagcagtcgatcagtgggtgggaaatcagacaaaagcgataaa
atgcaatccaatgaaaaggaaagagaaaccaaaaaggaggaaggggagaaagaagaaatg
gatattgataaggaagaaagcagtacagataagggtaacaggcataatgaagatagagat
ggggatgataacgcggataatgaagatgacaatgatgatgatgacaaagaagatgataat
gacgatgatgaaattatagggaagaaaggtccgaggtcgggaagagagattgatattatt
gacaacacagaatgcaagtttaacgttaattccttcaagctcgtctatgtgatcaatagt
gagagctacctgtacaagcgcatggccttgaagcgggcaagggagtcccacaaggacctg
tctctaaagctgcatggcaaattcagtgcatgggtggacaagtggaaaaaagctcatgtg
actcgggagcaggaaacaaaatgttccaaatggctgaatggagattctggcaacaatcga
ccctgcatcacgaccaagggggacattgacgtgacagataagtcgccatattacaagtac
acaaagtatcgagtgaagtttctgaaagatccagaatcagaattggaatga
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