Dreissena polymorpha (zebra mussel): 127834310
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Entry
127834310 CDS
T08834
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpol03009
]
127834310
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127834310
Ribosome biogenesis [BR:
dpol03009
]
Eukaryotic type
Pre-60S particles
Helicases
127834310
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
Motif
Other DBs
NCBI-GeneID:
127834310
NCBI-ProteinID:
XP_052216013
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Position
1:complement(70425871..70599998)
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AA seq
600 aa
AA seq
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MDGRTKNMNDWKEIAHVITEPSENVLEELKFIKPTPVQAACIPLLLNYKDVAAEAVTGSG
KTIAFLIPVFELLIKRESPWKTNEIGAVIVSPTRELAQQIFAVTQVFLKHFSTLTASLYI
GGKLSKKDCHDLGFGNIVIGTPGRLEAMLERKDGSTGPEMARCVKSLEILVLDEADRLLD
MGFEASINTILSFIPKQRRTGLFSATQTDEVEKLIRAGLRNPVRVTIKEKSNIKHENPES
NNIQKTPATLNNYYMIVKPEEKLNQLVQFIQTYRKQKIMLFVGTCASVDYFSKILPGLVK
TQVYCIHGKMKNRQKVVSRFTSQGGGVMVCTDVMARGIDIAGIHWVIQLDPPTSATVFVH
RCGRTARMGHAGSAVVFLLPHEETFVQFIEVVQKVPLHRMEPLTVDGGSVQKVQTMALND
RAVFEKGMRAFVSFVQAYAKHEISHIFKLKTLDFGALATGFGLIKFPKMQETKGLSLSNF
YEVPIEVSEIKYVDKAMEKRRQEQLQTEVSNHAHRKQKATKAWSENKEHKDRKRKRKEIK
DMKRKQIRRENITEDDIQAIDEDFKMIKKLKQKKISQEDFDREFISSDEEETKTEKNCHH
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaggacgaagaacatgaatgactggaaagaaatagcacatgtcatcacggaa
ccttccgaaaacgtattagaagagctcaaatttatcaaacccacaccagttcaagcagca
tgtattccgcttctcttgaattacaaagatgtcgcagcagaggctgtaacgggaagtgga
aaaactatcgcgtttctaatcccagtttttgagcttctcattaaacgcgagtcaccatgg
aaaacgaacgaaatcggagcagtcatcgtgagtccgacaagagagcttgcacagcagata
ttcgctgtaactcaagtgtttcttaagcatttttctacattgacagcatctctttatatt
ggtggaaaattatcaaaaaaggattgtcatgatttaggatttggaaatattgttattgga
actcctggtcgactagaggcaatgcttgaaaggaaggatggctctacaggccctgagatg
gcacgctgtgtgaagtcgctagagatactggtgctggatgaggcagaccgcctccttgat
atgggctttgaggccagcatcaacacaatactcagttttattccaaagcaaagaaggacg
ggtctattttctgcgacacaaacagatgaagttgagaagctgattcgagctggcttaaga
aatccagtcagggtgactatcaaagagaagtcaaacatcaaacatgaaaatccagaatcc
aacaatattcagaaaacccctgcaaccttgaataactattacatgatagtgaaaccagaa
gagaagttgaaccaacttgtccagttcatacagacttacagaaaacagaaaatcatgctg
tttgtgggcacttgtgcctctgttgactatttttcaaagattttaccaggactggttaaa
acgcaggtttactgtatccatggaaaaatgaaaaaccgtcaaaaggttgtgtcaaggttt
acatctcagggcggaggggttatggtttgtactgatgtgatggcccgtgggatagacatt
gctggtattcactgggtcatacagcttgatccacccacatcagcaacagtgtttgtgcat
agatgtggtcgcacagcgaggatggggcatgctggcagtgctgttgtgttcctgttgccc
catgaggagacctttgttcagttcattgaggttgtccagaaagtgcctctacacagaatg
gagcctttaacagtggatggaggcagtgttcagaaagttcagacgatggccctcaatgac
cgggcagtctttgagaagggaatgcgagcatttgtcagttttgtgcaggcatacgccaag
catgagatcagtcacatattcaagttgaagacccttgactttggagccctggctaccggg
ttcgggttaatcaagtttcctaagatgcaggaaaccaaaggactgtccctaagcaacttt
tacgaggttccaatcgaagtttcagaaataaaatatgtagacaaagctatggaaaaacga
cgacaagagcaattacaaactgaggtctcaaatcatgcacacaggaaacagaaagcaacc
aaagcctggtcggagaacaaggaacacaaagacaggaaaaggaagcgaaaggagattaaa
gacatgaaaagaaagcaaataaggcgagaaaacattactgaagacgatatacaggcaata
gacgaagattttaaaatgattaagaaacttaaacagaaaaagatctcacaggaggacttc
gacagggagttcatttcctcagatgaagaagagacaaagactgaaaaaaattgccatcat
taa
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