KEGG   Dreissena polymorpha (zebra mussel): 127834385
Entry
127834385         CDS       T08834                                 
Name
(RefSeq) replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
dpol  Dreissena polymorpha (zebra mussel)
Pathway
dpol03030  DNA replication
dpol03410  Base excision repair
dpol03420  Nucleotide excision repair
dpol03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dpol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127834385
   03410 Base excision repair
    127834385
   03420 Nucleotide excision repair
    127834385
   03430 Mismatch repair
    127834385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpol03032]
    127834385
   03036 Chromosome and associated proteins [BR:dpol03036]
    127834385
   03400 DNA repair and recombination proteins [BR:dpol03400]
    127834385
DNA replication proteins [BR:dpol03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127834385
  DNA Replication Termination Factors
   ELG1-RFC complex
    127834385
Chromosome and associated proteins [BR:dpol03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127834385
DNA repair and recombination proteins [BR:dpol03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127834385
  Check point factors
   HRAD17(Rad24)-RFC complex
    127834385
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_lid_RFC1 AAA_16 AAA_assoc_2 AAA_22 DNAX_ATPase_lid AAA_30 AAA_11 AAA_24 SLFN-g3_helicase DUF815 ResIII Gp44_lid Mg_chelatase RuvB_N AAA_5 Kinesin AAA_7 AAA_19 TPR_SusR bpMoxR
Other DBs
NCBI-GeneID: 127834385
NCBI-ProteinID: XP_052216159
LinkDB
Position
6:65692608..65711500
AA seq 361 aa
MQAFLKTGTLGSSTKEKTDALQGSSKESKQKKKHIPWVEKYRPRTVDDVAYQEEVVAVLK
KSLQGSDLPNLLFYGPPGTGKTSTILAASRELFGDIYKTRVLELNASDERGIAVIREKVK
TFSQQSASSVRPDGKPCPPFKIVILDEADSMTDAAQAALRRTMEKESKSTRFCLICNYVS
RIIEPIASRCAKFRFKPLAEEILKKRLRHICDEEKIACEDEALSALLYTSEGDLRKAITF
LQSASRLKAEETITQADIYNIAGVIPDDVLDSLITVCHSNSYEKLQANVQELMNEGHAAS
QLILQLHDKLVQLDELTDKQKSVVLEKLAVVDKCLMDGADEFLQLMSLCSILMQQICQPN
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcaagcatttttgaaaacgggcacccttggttcaagtaccaaagagaagacagatgca
cttcaaggcagctctaaagaatccaaacagaagaagaaacacatcccatgggtagagaaa
taccgccccaggacggtggatgatgttgcatatcaagaggaggtggtggctgtcctcaag
aagtcactgcagggctcagatttgcccaatttgttgttctatggaccaccaggcacagga
aagacctctactatcctggctgcttccagggaactgtttggtgacatctacaagacgcgt
gtgttggagctcaatgcctcagacgagagagggatagccgtgatacgagagaaagtgaag
acgttctcccagcaatctgctagcagtgtgaggccagatggcaagccatgtccccctttc
aagattgtcattctggatgaggcagactccatgacagatgccgcccaggctgcacttaga
cgcaccatggagaaagagtcaaagtcaacacgtttctgtttgatctgcaactacgtgagt
cgtatcatagaaccaatcgcctccaggtgcgcaaagtttcgcttcaagccattggctgaa
gagatcctcaagaaacgactgaggcatatctgtgatgaggaaaaaatagcctgcgaggat
gaggccctgtcggcccttctgtacacgtcggagggcgacctacgtaaggccatcacgttc
ctgcagagtgcctcgcggctcaaggcagaggagacaatcacacaggcagatatctacaac
atcgctggggtgattccagatgatgttcttgacagcctgatcactgtgtgtcattccaac
tcctatgagaaactgcaggcaaacgtacaggagttgatgaacgagggccatgctgcctct
cagctcattctgcagctgcatgataaactggtacagctggatgagctcactgacaaacag
aagtctgtcgttctggagaaactggctgtggtggacaaatgtttgatggacggtgcagat
gaatttctacagttgatgtcgctgtgttccatactcatgcagcagatctgccaaccaaac
aaatga

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