Dreissena polymorpha (zebra mussel): 127836572
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Entry
127836572 CDS
T08834
Name
(RefSeq) uncharacterized protein LOC127836572
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127836572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpol03041
]
127836572
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127836572
Spliceosome [BR:
dpol03041
]
Complex C
Other components
Step II factors
127836572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_DEAH11
Helicase_C
RRM_1
IBR
DEAD
OB_NTP_bind
IBR_1
IBR_2
zf-RING_2
AAA_19
AAA_22
KH_1
nSTAND3
DAPDH_C
RBD_DEAH11
KH_DEAH11_1st
ABC_tran
DUF7599
MinE
AAA_29
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
127836572
NCBI-ProteinID:
XP_052219192
LinkDB
All DBs
Position
6:complement(68837877..68857335)
Genome browser
AA seq
1770 aa
AA seq
DB search
MSHSVKNDTEISEGDLVKAMGPHSRERASSESADKSKSTSRDNGGAKPKGRSSHASVYQT
NSSGLQKVASEGTTYAKKDSSNNKNWRKKKAKTTEYAEGKNRPRSTFLYVVLCEDIPNQK
LITEYLRQRMGNPKCLEFKIDAIEKMTSNNEGCTLLSISCLSFKQSKRVEGLLNKSNMGS
QNKIYCFFNKIKALGENLGSTKMREEKVTKALNEIIEASGRVLNQHDNKIECKQSEILQI
DCQLQQKRGVAFDVFEKLSAEKIALSDKLDELYLQRSEFMNYLKSVRSKITVVMDHVNPD
GELLEVRKALGVECRRLDAALPMYARREDILTTIMHNQVCVILGETGSGKSTQIVQYLYQ
AGLSEHGLIACTQPRKIAAISLATHVSKELASSVGQIVGYQVGMQSKKTAITRVLYMTDH
ILLNECISDKLLSKYCCVVMDEAHERSIHTDLLIGMLKRVLAARQDLRVVVTSATIDPGV
FVDYFGGPDKCPVLQVSGRTFPVDICWETDEASDFPDDYERKALNKAIEIHTSEPLDGGD
ILVFVTSALETSRCVERFKQRCGDKNNICLQLHGRLKPEEQQHVFDPTPTGKRKIVFATN
IAETSLTIDGVKFVVDTGLAKEMRFDPKRNMSSLDVTQISQSSANQRKGRAGRTSAGKCY
RLYTKNDFFKMETSSTPEILRIEVSHAILKLFQLMSDPLEFDFVQSPSPLAMKAAHEDLI
YLEAIDDNGITELGKWIAQLQVEPRLGVMIKKGIDDGIPLEAMIVGTCCNQSVFYRAGTE
EEKKAADLKKLEFCHAGGDLITMLCVYREWDAIKEKEKGKWCNSKCINGKSMKGVRDMVN
EICTTLKKEMGLKIKHEFTEPISANEKIKALIFDCMHRNLGYYLGHESAGYVITERNQRV
QLHPSSVIWPLGLHPTWIVFNRVLKTSNDYITEITPIEQQIIADAKTLGKISVDENKLSS
MRVELVPPVLVGKHVFWKFVGPMHKNRRKVQDEIQSVCESTTVIIDAMKQRGEIQLYCIP
AYAGIAFDLLNNYLQPLSEQLSFERLEEPIGAENNSVRALLGEGGLVCDILMPTQFRVLN
IKQKIGESCDLNEDMLRGLLSTFGPIENIWQSTGQKQNVFWGKVTFTNHSDAERAVNEIQ
NDVASNFSLIPITFQAHMNVNQHGYTIKLTWCRRKAKGVCYVYVDRPEDLSFLMSNRVNI
LGNSLLLVPAKQQSDLYIRNLPANVMEEDVAKGLGELLSLSNADTKDRFKIIIPRENIIW
RTNELDQTRAELINILQRYTLHDKYDLRVVNYQQKTVTGVAYVTFSDMEECERVFESLMA
EHETMNGSRLSAQRECKSFVHIKRHIYGVIQEDIMKQMELVESDASSIEVRQLKSGHYSI
DIKSKSLQKLAKVKVKIDRLVNGNVIEQSESTDILPLLTKNGKRKLIDIQQRTKTIICAD
DRHIRISVQGLEVDRARALELIMNEIQCSSLSNETEIRLKGEDNPPGLMKALILKYGMQF
EQLVKESNISCVSLNFRRQEITITGPADAVEKALDLIRDEKNSLPKLQSEDPDPYKVPDC
PVCLCPIEETEMCRLEFCGHAYCSRCLSAMLKAAIDSREFPITCATDKCNRPLVARDFKN
FMRTNDIKKMNLVNASVNDFARRNKQCYRFCRTPDCPMIYRVNSSENRYDCPLCHAKTCT
RCHVEYHDGLTCAMYASAKQDGDSVLRWVKEDPQNRKMCPKCEYGIEKNGGCQHMECVAC
KAHICWICMKFFKSSRSCYGHLTSAHGSFV
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacagcgtgaaaaatgatacagaaatctcggaaggtgacttggtcaaggccatg
ggaccgcattcaagagagcgcgccagttctgaaagtgcagacaaatcaaaatccacatcg
cgcgataatggcggtgcaaaacccaaaggaagatccagtcatgccagtgtttatcaaacg
aattcatctggtctacaaaaagtggcgtctgaaggaacaacttacgcaaaaaaagattca
tcaaacaacaaaaactggagaaagaaaaaagcgaaaactacagaatatgctgaaggtaaa
aacagaccaagaagtacatttctttatgttgtgctctgtgaagacatacctaaccagaag
cttattacagaatacttaaggcaacgaatgggtaatcccaaatgccttgaatttaagatt
gacgctatcgaaaaaatgacttcaaataatgaaggctgcacgttattgtcaatatcatgt
ctcagctttaaacaatctaagagagtggaggggctcttaaataaaagcaacatgggttca
cagaataaaatatattgctttttcaacaaaattaaagccttgggagaaaatcttggttcg
acaaaaatgcgtgaagaaaaagttacaaaagctttgaatgaaataattgaagcttcagga
cgtgttttaaatcaacatgacaacaaaattgaatgcaaacaatccgagatcctacaaatt
gactgtcagttacaacaaaaaaggggtgttgcctttgatgtatttgaaaaattgtcggcc
gaaaaaatagctttaagcgataaactcgatgaactttatctacaaagatccgaatttatg
aactatctaaaaagcgttaggtcgaagatcacagtggtaatggatcacgttaatcctgat
ggcgaattacttgaggtgcgcaaggcacttggggttgagtgcaggcgtctggacgctgca
ttgcccatgtacgctcggagggaggatattcttaccactataatgcacaatcaggtgtgc
gtcattctgggagaaactggctctggcaaatctacccaaattgtccagtatctttaccag
gcaggattgtcagagcatggtttgatagcgtgtacacagcctcgcaagattgctgccatt
tccctagcaacgcacgtgtcaaaggagttagcgtcaagtgtaggacaaatagtcggctac
caggtcggaatgcagagtaagaaaacagcgattacccgcgtattatatatgactgaccat
attttgctgaacgaatgcataagtgacaaattgctatcaaaatattgctgcgttgtaatg
gatgaggcacatgagaggagtattcacactgatcttcttattggtatgttgaaacgcgtt
ttagcagctcgacaagaccttcgagtagtagttacatctgcaactattgatcctggggtt
tttgtggactattttggaggtccggacaagtgtccggtcttgcaggtttcaggtcgaacg
tttccagttgacatttgctgggaaaccgatgaagctagcgattttccagacgactacgag
cgtaaagctctaaataaagccattgaaatccatacttctgagccactggatggtggagac
attcttgtattcgtcacatccgcattagaaacatcgagatgtgttgagcgttttaaacaa
agatgcggtgataaaaataatatatgtttgcagcttcatgggcgtcttaaaccagaagaa
caacaacatgtgtttgatcctacaccaacaggtaaacggaaaatagtatttgctacaaat
attgcagaaacatctctaactatagatggagtcaagttcgttgtggatactggtttagca
aaggaaatgcggtttgatcctaaacggaatatgagttctttggatgttacacaaataagt
cagagttcggcaaatcagaggaaaggacgagcggggagaacgtcagccggtaagtgctac
agactttacaccaaaaatgacttcttcaagatggaaacatcgagcacacccgagatttta
cgaatagaggtatcacatgcaattctaaaattgtttcaattgatgagcgacccactggaa
tttgattttgttcagtctccatcacctctggcgatgaaagcggctcatgaagatctaata
tatctagaagcaattgatgacaatggaataactgaacttggaaagtggattgcacaactg
caagtagaaccaagactgggggtaatgatcaagaaagggatagacgacgggattccatta
gaagcaatgatagtaggaacctgctgcaaccaaagtgttttctaccgggctggtactgaa
gaagagaagaaagcggcagacttgaaaaaacttgaattttgtcatgcgggtggtgattta
ataacaatgttgtgtgtttatagagagtgggatgcaatcaaagaaaaggagaaaggaaaa
tggtgtaattcaaaatgtataaatggaaagtcgatgaaaggggtaagagatatggtaaac
gagatatgcacaacattgaagaaggaaatgggtttgaagattaaacatgagttcacggaa
ccaatatcagcgaatgagaaaattaaagctctcatttttgactgcatgcacaggaaccta
gggtattacctgggtcatgaaagtgctggatatgttattaccgagcgtaaccaacgggta
cagctgcatccctcatcggttatctggccattaggattacatccgacatggattgtgttc
aatagagtgttaaaaacatcaaatgattacataacagaaataacccccattgagcaacaa
ataattgcagatgccaaaactttgggtaaaatttcagtcgatgaaaataaactgtcttcg
atgcgagtagagcttgtaccgccagttctagtaggaaaacacgtgttctggaaatttgtt
ggaccaatgcataaaaacagacgcaaggtacaggatgaaattcagtctgtttgtgaaagc
acaacagtcatcatagatgccatgaaacagagaggagaaatacaactgtactgcatccca
gcatacgccggaattgcatttgacctcttgaataactatttgcaaccactatcagaacag
ttgtcatttgaacgattggaggaacccatcggggctgaaaacaattccgtccgagctctt
cttggagaagggggtcttgtatgtgacatcttgatgcccacacaattcagagttctcaac
attaaacaaaaaataggggaatcctgtgatttaaacgaagatatgcttcgaggattacta
tcgacgttcggaccaattgaaaacatttggcaaagcactggacagaaacagaacgtattt
tgggggaaagtaactttcaccaatcattctgatgctgaaagagctgtaaacgaaatccaa
aatgatgttgccagtaacttctcccttataccgataacatttcaggcccacatgaatgta
aatcagcatggttacaccataaagcttacatggtgtcgccgaaaagcaaagggggtgtgt
tatgtgtatgtagacaggccagaagatctttcttttttaatgtcaaaccgagtcaacata
ttagggaattcgcttttactcgtgcctgcaaaacagcagtcagacttgtatattaggaat
ttaccagctaatgttatggaagaagatgtagcaaaaggcctaggtgaactactttctttg
tctaatgctgatactaaagacaggtttaaaattatcatcccaagagaaaatattatttgg
cgtacaaacgaactcgatcagacccgggctgagttgattaatatattacaaaggtacact
ttacatgacaaatatgacttgcgtgtggttaactaccaacagaaaacggtaacaggagtc
gcgtacgtaactttcagcgatatggaagagtgtgagcgtgtctttgagagcctgatggct
gagcatgaaacaatgaacgggagtcgtttaagtgctcaacgggaatgtaagtcttttgtt
catatcaaacgacacatatacggcgttatacaagaagatatcatgaaacaaatggaactc
gtggaatcggacgcgtcaagcattgaagtgcgacagttaaaatcaggacactactccatt
gacattaagtctaaatcgttgcagaaactggcaaaggtcaaagttaagattgatcggtta
gtgaacggaaatgttattgaacagtctgaaagcacagatattttacctttacttacaaaa
aatggcaaacgaaaacttattgatatacaacaaaggacaaagacaatcatctgtgcggat
gacaggcatatccggatctctgtccagggacttgaagtagatagagcacgggcgttagaa
ttgattatgaacgaaattcaatgttcaagtttgtcgaatgaaacagagattagactgaag
ggggaagataacccaccaggtctcatgaaggcattgatactgaaatatggaatgcaattc
gaacaactggtaaaggaatctaatatttcctgcgtgtccttaaacttccgccgtcaggaa
ataacgataacaggtccggctgatgccgttgaaaaagcattggatttaattcgagacgag
aaaaattcgttgccgaagcttcagtccgaagatccagatccttataaagtacccgattgt
cctgtgtgcctctgtccgatagaggaaacggaaatgtgtcgcctggaattctgcgggcat
gcttactgcagcagatgtctgtcggcaatgttaaaggcagctattgatagccgggagttc
cccataacatgtgctacggataaatgcaataggcctcttgtggcgagagattttaaaaac
tttatgcggaccaatgacataaagaagatgaatttggtaaacgcatcagtcaacgacttt
gccagaagaaataaacaatgctaccgattttgtcggacgcctgactgtccaatgatatat
agagttaattcatctgagaatagatatgattgtcccctctgccacgcgaaaacatgcaca
cgctgtcatgttgaataccacgatggactaacgtgtgccatgtatgccagtgcaaagcag
gatggcgactcggtgctacgctgggtgaaggaagatcctcaaaaccggaaaatgtgtcct
aaatgtgaatatggaatagaaaagaatgggggctgccaacacatggagtgcgtagcatgt
aaagcacatatttgttggatttgcatgaagtttttcaaatcaagcaggagttgctatgga
catttaactagtgctcatggttcttttgtttga
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integrated database retrieval system
