Dreissena polymorpha (zebra mussel): 127837454
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Entry
127837454 CDS
T08834
Name
(RefSeq) nucleoporin NUP188-like
KO
K14311
nuclear pore complex protein Nup188
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127837454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127837454
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127837454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
127837454
NCBI-ProteinID:
XP_052220538
LinkDB
All DBs
Position
7:complement(79985893..80109833)
Genome browser
AA seq
1771 aa
AA seq
DB search
MAGSAGESRKTETFGNRNLWQYVSGTGILRPRELIKRELARNKEKILKGLLFYKAPNAPE
GSFLKAKKLSSQQQEFVQKLTFFLALDESQSYDVFCSYISQDFRGSQKNLQLALSTERHM
QGLMVKIRDFYHCERLYLLQTVKHILTFWQEAEGHPYREEYTEFLNELLLNNELIKKVLE
QLHHVTEAQLPTWETHGKLMDSRHALVWAHQNLKEQVELLEILLVYWKDFEASPGDFIKL
LDKFKRQGFGRRQNFKHVLEEPMDRLVKRIGSLEVLVLLQALDLETVERLASSKRAEEHS
LLKDQHMFQAIDKAVQLLGAEQPHGPLLLSWAVIRQLFIEGGGGQLTKKYGNQALQLNVF
DFILDMLSLEPFCGKSMTASLSHCVIYTVLLAALTAFEETTLTRSHMEMQVLIDITAKVM
AREFIAVNVWSKGLDQGVGNLFQSSLLNFPLDFTTLVKLSTALASANSSSASKVLELWSE
LPRYTEYLDRNSSQDIRPVQDDLIWQLTRDKTPYSAGDFRIPSGVYGQLITTGRKGELEV
PIIQWEVPYNGWELLKGEIQELLYQVAKGAGMVSPVQIQRVTDVTLFVRAVCRSQPGAAE
GLADIVSLLYMVIQRFVTFNPPPLKLLAAAVDCVTCVAKQQPRQAWHEMKQTGLLPYLTE
NIDNMAEVLSGQGLNAGLYGNLLAGCEVPQGNYLLTEAFLDFVSDLVMPLYKLGQEEQLQ
PCLMYILREIFPAFQKWRYYSTPKKEIIGQKCLSITHKILNLNVPKEKLQAKRPHIRQLC
AYSLLFTEAGKALLEIIATGVETVELLLSQQSSQSEGSGEDLVQLIQMAFSVMNRLLLLR
SHDQLSPVEVALSSQPAGYQNQHIVGVIAEYIYHRTNPLLPKLATLFLRRLAVVLPMSIL
ACLGAQAEALRDIYLMRLQSATEDLGLKTGILELLSVCVESQPGLIELFLNVQPAPQSNT
VKDVQVGQVSCIQTVLDLIDSRRQGSYQCPPDLLSACTNFIHALWLGSRETAMVALKTKP
NFWSSFCMSLLKDLPSIGDQFLPYKIKTVSYIFKVLAQEIYSVPSSNMDENLKNFLKDLA
AKNRLKYWSSYVMEGVRDTDSRPQDTSLDGAVDVTENPVHKLLLAWKNFLVVVSKMQVAE
LKLEDGVKEIIVVDLLEAIHAQFTGPLTELGHTLSKTCSALYFTLVTNWMSSLKSWSPIM
NRCQDTLVLSMSSGDTMIPSIQIGLIGALLAFLQSVRTEPSKKMDMSRLREMLVSVCQML
IQSTRELPSIRDLQTARDTPEQSDRTFGSTDHRLKLQIVICCALDELIHLTESPEVWLPI
LQEHMVLAALLSSVEQYVNAQECVHYVQTVFTMLVTVAKHDKGAEALATAGLTHHVCLSV
TRCYQNMDTNMYQRPTPSKKSKVSGSQSGSWMGVYCMGLELYSSLLERLRFAFLEDAFNF
VGCHQDRIQQCLEMARFSLCPETFLEVERTCVFVGELATYSREWRLHLPETLNKILTGIL
CMNQTFISYLIRPRYLQLILEQQGVEKQLNGRALNRTPSLQHQTSTEDLDHPSRHHLQVQ
NSMLKILGASFVALRKFTPDLIQILVDQSMDVGEYEPFLGVGFSTPPADQDTPPTFGTML
SCVNIAIRLLAKLEPTKSPQRADQATSQASHSSIYQVISKSLVMFVMENALYLTMSQGML
YLKDAEVHQRDKQLLKRELGTELNSILSGIQRYLRRGGPHSPATGLPQTSPRSGQSPGGP
SLSRSVSQTFMSSQEHAVFRLVQEFSKQVLR
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatcggctggtgaatcccgtaaaacagagacctttggaaacagaaacttgtgg
cagtatgtcagcggaactggtattctgagaccaagggaacttatcaagagggaacttgcc
aggaataaggagaagattctgaaaggattgctgttttataaagcacctaatgcaccagaa
ggaagcttcctgaaggctaaaaaattatcaagccaacaacaggaatttgttcaaaagttg
acatttttcctggcattggatgaatcccagagttacgatgtgttctgctcctatatttct
caggatttcagaggttcacagaagaatctacagcttgccctgagcacagaacgtcacatg
caagggctaatggtgaagatccgtgacttctaccactgtgagaggctctacctgctgcag
actgtcaaacacatcctcactttctggcaggaggctgagggacatccttacagggaggag
tacacagaattccttaatgaactgttgctaaacaacgagctgatcaagaaggttctagaa
cagctgcatcacgtcactgaggctcagctgcctacctgggagactcatgggaaactcatg
gatagccgccatgccttggtctgggctcatcagaacttgaaagaacaggtagagctgctg
gaaatactgctggtctactggaaagactttgaggcatcacccggagacttcatcaagctg
ctggacaaattcaagagacagggatttggtcgacgacagaatttcaaacacgtccttgag
gaaccgatggacaggctggtaaaacggatcggctccctggaggtgttagtcctcctgcaa
gctctagatctggaaacagtggaacgccttgccagctcaaaaagagcagaagagcacagc
ctcctgaaggaccagcacatgttccaggcaatagacaaggcggtgcagttgctgggggca
gagcaaccccatgggcccctcctactgagctgggccgtgattcgtcagctatttatagag
gggggcgggggtcagctgaccaaaaagtatgggaaccaggccctgcagcttaatgtgttt
gacttcatactggacatgctgagcctggaaccattctgcgggaaatctatgacagcctcc
ctgtctcactgtgtcatctacactgtgttgctggcagcattgacagcctttgaagaaacc
acactcacacggagtcacatggagatgcaggtgttaattgacataacagcaaaagtgatg
gcacgagagttcatagcggtgaatgtatggagcaagggcctggaccagggggtgggtaac
ctgttccagtcttcgttgctcaacttcccgcttgattttacgacgctcgtcaaactgagc
acagcccttgctagtgcaaacagtagcagtgcatccaaggtgttggagctgtggtccgag
ctgcctcgctacacagagtacctggatcggaacagttcacaggacataaggccggtacag
gatgacctcatctggcaactgaccagggataaaacaccctactctgcaggtgattttcgt
atcccgtctggtgtatatggtcagctgataacaactggccgcaagggagagttagaagtc
cctatcatacagtgggaggtcccatacaacggctgggaattgctcaagggggaaatacag
gaactgctctatcaggttgccaagggcgcaggtatggtctccccagttcagatccagcgg
gttacggatgtgacgctgtttgtgagggccgtatgtaggtcacagccaggggcggcagag
gggctggctgacatcgtgtccctgctgtacatggtcatacagagatttgtcacgttcaac
cctccaccattgaaactattggctgctgctgtagactgtgtcacttgtgttgctaagcaa
caacctagacaggcatggcacgagatgaagcagactggcctactcccgtacctgacagag
aacattgacaacatggcggaggtcctgagcggtcaaggactgaatgctggtctctatggt
aacctgctggcaggatgcgaggtaccccagggcaattacctactcacagaagcattccta
gactttgtgtctgatcttgtaatgccgttgtacaagctgggccaggaggagcaacttcaa
ccatgtttgatgtacatcctgcgggaaatcttccctgccttccagaagtggagatactac
tcgacgccaaaaaaggaaatcataggtcagaaatgtctgagtatcacacacaagattttg
aacttgaatgttcccaaagagaaactacaggcaaaaaggccccatattcggcagctgtgt
gcctatagcctgctgttcactgaggcaggaaaggctttactggagatcatagcaacaggg
gtagaaaccgtggagcttctgctgtcacaacagtcaagccaatcagaaggcagcggtgag
gatctagttcagctgatacagatggcattctctgtgatgaaccgtctgctcctgctgagg
tcacatgatcaactctctcctgtggaggtcgcgttgtcatcccaaccagctgggtaccag
aaccagcacattgtgggagttattgcagagtacatctatcacaggaccaaccccctactc
cccaagctggccaccctgtttctacggcgactggcagtggttctacccatgtctatcctt
gcgtgcttgggcgcgcaggctgaggcactcagagatatctacctcatgaggctgcagtca
gctactgaggaccttgggttgaagacgggtattctggagctgctgtccgtatgtgtggag
agccagcctggtctcatagaactcttcctgaatgtgcagcctgcaccccagtccaacaca
gtcaaggatgtacaggtgggtcaggtgagctgcatccagacggtgcttgatctgattgat
tcccggcgccagggctcgtaccagtgtcccccggacctgctgtcagcctgcacaaacttc
atccacgccctctggcttggctctagggagacagcgatggtggccctaaaaaccaaaccc
aacttctggtcgagtttttgcatgtcattattgaaggatttacccagcattggggatcag
ttcctgccctacaaaatcaagactgtttcctatatcttcaaggtcctagctcaggaaatc
tactcggtcccaagcagtaacatggatgaaaatttgaagaatttcctgaaagaccttgct
gcaaagaatcgtttgaaatactggtcaagttatgtgatggagggtgtgcgggacacagac
agcagaccccaggacacgtccctagatggtgctgtggatgtgacagagaatcctgtacac
aagctgctactggcttggaaaaacttccttgtggtagtctcaaaaatgcaggttgctgag
ttaaagctggaggatggagtgaaggagattatagttgttgacctgttagaagccatccat
gctcagttcactggtcccctcacagagctgggacacactctgtccaagacgtgcagtgcc
ctttacttcaccctggtaaccaattggatgagttccttgaagtcctggtctcccatcatg
aaccgttgccaggatacactggtgttgtcaatgagtagcggagacacaatgataccctcc
atacagattgggctcatcggtgccttgctggcctttctgcagagtgttaggaccgaacct
agcaaaaagatggacatgagtcgcctgagagaaatgctagtgtcagtctgccagatgctg
attcaaagtacccgagaattgccatccatacgagaccttcaaactgcacgggacacacct
gagcagagtgacaggacctttggcagcacagaccatagactgaagcttcagattgtgatc
tgctgcgcgctagatgagctaatacacctgacagagagcccagaggtgtggctgcccata
cttcaagaacacatggtcctagcagccctcctgtcttctgtagagcagtacgtcaatgcc
caggagtgcgtacactatgtacagactgtgttcaccatgctagtcactgtggccaaacat
gacaagggtgctgaagcgctggccactgcaggccttacacaccatgtgtgtctgtctgtc
acgaggtgctaccagaacatggacaccaacatgtaccagaggcctacaccgagcaagaag
tccaaggtgtctggcagtcagtcagggagctggatgggtgtgtactgtatgggcctggag
ctgtactcgagtctgctggagagactcaggttcgcattcctggaggacgccttcaacttt
gtgggctgccatcaggatagaattcagcagtgtttggagatggcgaggtttagtctttgt
ccggaaacgttcctagaggtggagaggacctgtgtgtttgtgggagaactggcaacttac
agcagggaatggaggctacatcttcctgagacactcaacaaaatactgactggaatcctg
tgcatgaatcagaccttcatttcctacctgatcagacccaggtaccttcaactaatcttg
gagcaacagggggttgagaagcagctcaacggacgggcactgaaccggacaccctctcta
cagcatcagacgtccacagaggaccttgaccatcccagcaggcaccacttgcaagtccag
aacagcatgctcaagatcctgggtgccagttttgtggccctgaggaagtttaccccagac
ctgatacaaatacttgtggaccagagcatggatgtgggtgagtatgaaccattcctaggg
gtgggatttagtaccccaccagcagaccaggacaccccacccaccttcggtacaatgctg
tcgtgcgttaacatcgccattagactccttgcaaagcttgagccaacaaaatctccccag
agggctgaccaggcgacatcacaagcttcccactcatcaatataccaggttatttccaag
agtctggtgatgtttgtgatggagaatgccctctacctgaccatgtcccagggcatgctg
tacctgaaagatgccgaggtccaccagagggacaaacagctgctcaaacgagaactcggc
actgagcttaactccatcctctcaggtatacagcggtacctgcggcgcggtggcccacac
tcccccgccaccggtctcccacagacgagcccacgcagcggtcagtcgcctggcggtcct
tcgctcagtcggtcagtgtcccagaccttcatgtccagtcaggaacacgctgtcttcaga
ctggtgcaagagttctccaagcaggtgcttcgatga
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