Dreissena polymorpha (zebra mussel): 127837739
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Entry
127837739 CDS
T08834
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127837739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpol03041
]
127837739
Spliceosome [BR:
dpol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127837739
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EML
WD_LRWD1
NBCH_WD40
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
127837739
NCBI-ProteinID:
XP_052221015
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Position
7:84109919..84141710
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AA seq
518 aa
AA seq
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MDSDEESEAQFIAKRQKVLQYGSLEEKEKQRLAGGGGGEGSLAADAIKAGIAAGNINITS
GATMDLEKEYEQNQADLLAEFENRKKAKKIQVSTDDSEVKAHLRKLGEPICLFGEGPADR
RERLRQELAQRGEDAMKQQKVQQETLRKKKDEENVTWYHEGAVSLKEARVWIAEYSIPKA
KARVLKQKADSHFAAQKSVLNQDIHKRLRAVSNECSQIGDNRPLSFCQFSPNSKILATAS
WSGLCKLWSIPDCSPIRTLRGHNCSVGAIVFHPQATVSLDETACSMASCSQDGAVKLWNL
VSDEPVADIEGHAPYRVSRLAYHPSGRFLATCCFDNSWRLWDLEVQEEILHQEGHSKPVY
DISFQCDGALAATGGLDGYGRLWDLRTGRCVMFLEGHLKSVLAVDFNPDGYHLATGSEDN
QAKIWDLRQRQCTYTIPAHNSLISKVKFQPTHGRYLVTASYDSSTKIWAHPVGTPIKTLA
GHEGKVTGVDVSPNLQYIASVSFDRTFKLWASEMKGGL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggattcagacgaggagagtgaagcccagttcatcgccaagcgacagaaggtgttgcag
tatggcagtctggaagagaaggaaaagcagcgcctggcgggcggtggcggcggggagggc
tccctcgctgctgacgctatcaaggccggcattgctgcagggaacattaacatcactagt
ggcgccaccatggatctagagaaagagtatgaacagaaccaagccgacttgctagcagaa
tttgaaaatcggaaaaaggccaagaaaattcaagtgtcaacagacgactctgaagtgaag
gctcatctgagaaaactcggggagccaatttgtctgtttggggagggcccagctgaccgc
agagagaggctgagacaggagcttgcacagagaggagaggatgccatgaagcaacagaaa
gtccaacaggaaactcttcgcaagaagaaagatgaggagaatgtcacttggtaccacgaa
ggtgcagtgtcactgaaagaagccagagtgtggattgcagagtattcaataccaaaggct
aaagcaagagtgctcaaacagaaggcagactcgcattttgcagcccagaaatccgtgttg
aatcaagatattcacaagagattaagggctgtcagtaacgaatgcagtcaaatcggagac
aacaggccactgtcgttctgtcagttctctccaaatagcaaaatactggccacagcatca
tggtctggcttgtgcaagctgtggtcaatacctgactgttcccctataaggaccttgagg
ggtcacaactgcagtgttggagcgatagtgtttcacccccaggccacagtgagtcttgat
gaaacagcctgctctatggcctcctgtagtcaggatggggcagtcaaactatggaacctg
gtcagtgacgagccagttgcagacattgaaggacatgcaccatatcgtgtctctagactg
gcatatcatccttcaggccgattcctggccacttgctgttttgacaactcgtggagactg
tgggacctggaggtccaggaggagatactgcaccaggagggacacagcaagccagtctat
gacatcagcttccaatgtgacggggcactggccgccactggtggcctggatggctatggt
aggttgtgggatttacggactggaaggtgtgtcatgttcctggaaggtcaccttaagtcc
gtcctggcagtggacttcaatccggatgggtaccatctggccacaggtagtgaggataat
caggccaagatctgggacctgcgacagcggcagtgcacctacacaatacctgcccataac
agtctcattagtaaagtgaaattccagccaacacatgggcggtacttggtgacagcgtca
tatgattcctccacaaagatctgggctcatccggtgggtacacccatcaagacgctggcg
ggtcatgagggcaaggtcactggggtcgacgtatcacccaatctccagtacattgcctct
gtctcctttgacagaacattcaaactctgggcctcagagatgaagggtggactctga
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