Dreissena polymorpha (zebra mussel): 127837898
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Entry
127837898 CDS
T08834
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127837898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127837898
Enzymes [BR:
dpol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
127837898
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127837898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
127837898
NCBI-ProteinID:
XP_052221310
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All DBs
Position
1:82308931..82348531
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AA seq
546 aa
AA seq
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MVEVTASNFSEYFSEIEEAIRQCDFIALDTEFTGLKIDDDANKPSLFDGGAERYAKLRET
ISKITICQLGISVFRRDQKQTSVYVAKTYNIPLFPRSFGPVDERFVCQASSLQFLCRYKF
DFNKFIYEGLSFLNEDQERQVREHIASKAMFTGLERDLDEEALQRICSRVAEWLVSKDNV
PVFTLQKSDMESFPLYVLSTELRGRFPTIWTTVDSNLKTIEVQRIDQGEREKRESEELTN
QKQQEEQLVQRMLGFTRVFRVMKQCKKPLIGHNNLMDLMLVYDKFHLPLPASYTEFKSQL
HAIFPWIYDTKHVIFRMRGAITEDTGLLQKTSLSEIYKELDSDKGRDLVIFPPAVMHAEG
HTKYNGDSLPHEAGFDAFMCGFVFLRLAHIKTFKDVKSSEVIPCLFRRYLQSMEEYCNKV
NIIRARINNISLDSVDYQSEKPELLFVRSRLMKKRLNIDQLAKWFSPYGNVDIRVFGKNR
ALAATNNFKCSRDILKAFRGHPTIYVAEYSIWRHSPLVRGILWSGAIVSGGLCILALVGS
VKERKP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagtaactgcctccaactttagtgaatatttctccgaaatagaagaagcaata
cgacaatgtgatttcatagcattagatactgaattcactggattgaaaattgatgatgat
gccaataaaccaagtttatttgatggtggggcagaacgttatgccaagctgcgggagaca
atttcaaagataactatttgtcagctaggtatttcagtattcagacgagaccaaaagcag
accagcgtctatgtggcaaagacctacaacatcccgttgtttcccagatcctttgggcct
gttgatgaacggtttgtctgccaggcttcgagtcttcagttcctttgcagatacaagttt
gattttaacaagttcatttatgaaggcctgtcgtttctcaatgaggatcaggagaggcaa
gttcgggagcacattgcaagcaaggccatgtttactggacttgagagagacctggatgag
gaggccctacagaggatatgctcacgtgtggcagagtggctggtatccaaggacaatgtc
ccagtcttcactctccagaaatctgacatggagagttttcctctgtatgtgctgagtaca
gaactacgggggcggtttccaacaatatggactactgtagacagcaatctcaaaacaatt
gaggtccaacgtattgatcagggcgagcgtgagaagagggagtctgaagagctgaccaat
cagaagcagcaggaagaacagctggtgcagaggatgctgggatttacacgggtgttcaga
gtcatgaaacagtgcaagaagccacttattggccacaacaacttgatggacctgatgctt
gtgtatgacaagttccaccttccactgcctgcgtcctacacagagttcaaatctcagctg
cacgctatcttcccctggatctacgacaccaaacatgtcattttccgcatgagaggggcc
attacggaggacacaggactgctgcagaaaacctctttatcagagatatacaaagaactg
gacagtgataaaggcagagacctggtgatatttcctcctgcagttatgcatgcagaaggc
cacactaaatacaatggagattctctgccccatgaagctgggttcgatgccttcatgtgt
ggatttgtttttctgaggttagcgcatataaaaacgttcaaagatgttaaatcatcagag
gtgataccatgtctgttccggcgctatcttcaaagcatggaagagtattgtaataaggtc
aacatcataagggcacgcattaataacatttccttggacagtgtagactaccaatcagag
aagccagaactactgtttgtgaggagccgacttatgaagaagaggctcaacattgaccag
ttagcaaagtggttctctccctatggcaatgtggatataagagtttttggcaagaaccgt
gcattggcagctaccaacaacttcaaatgttccagggatatcctgaaggcattcaggggt
cacccaacgatatatgtggcagagtacagtatatggaggcattcaccactagtcagggga
atactttggtctggtgctatagtatcaggaggactgtgtattctggcactagttggctca
gtgaaggagaggaaaccttga
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