Dreissena polymorpha (zebra mussel): 127838009
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Entry
127838009 CDS
T08834
Name
(RefSeq) ribonuclease 3-like isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127838009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127838009
03009 Ribosome biogenesis [BR:
dpol03009
]
127838009
03036 Chromosome and associated proteins [BR:
dpol03036
]
127838009
Enzymes [BR:
dpol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
127838009
Messenger RNA biogenesis [BR:
dpol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
127838009
Ribosome biogenesis [BR:
dpol03009
]
Eukaryotic type
90S particles
RNase
127838009
Prokaryotic type
rRNA processing factors
127838009
Chromosome and associated proteins [BR:
dpol03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
127838009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
127838009
NCBI-ProteinID:
XP_052221455
LinkDB
All DBs
Position
7:47080667..47602526
Genome browser
AA seq
1722 aa
AA seq
DB search
MDDRSTSGSFHDNFSPGSPDMTAMEAIDSVMGDSDVEGFSESSRHRHSHRSSVHSGEGLE
NRSRKHRHREGHDHHHRHKRGHRSHRSSSSYGNHSNQEGDQEGVPAGYIAVDQEGEVDSM
PQVYKRYHDLLHRHIDLEDGEVHSPNEVEEGEFLEPKERLRKSSKHSRSHSRKHKRKHSK
EHSDLDEFELDYVDKYRIMETQHELSRESLRRQREMEIYKYEKAKMKEALKERAYYEYER
AKLEAAMKEKAMRRAIREKAYRDAVKEQAYKDALKKKAYMDDMEEKAMRDAMKERAYRKA
LKEKAYQESMREREIFGKSGSSIEYGASGAVLMDDSDTFSVMSDYSMKSDRRERALSDQG
RRVQRGLSGAILVEERSPERTLSYRDVYPEEFDGARVKVGRSGAILKDDIEERGFGSMSG
ERIVRGRSGAVLREDTADEGGKIVRGRSGAILMEDNDEHGDFIAKRSDARLGIGRTGSVL
REEMPGAKIARGASGAILLEDREDEKGWVEMGKTGAILRDDRSDLTDAPAPRYMEERQHP
FKKFPPRGNMPPGEPSWGSAPMGTRGRGSFRGQGRGRGRGQGELRSPMPVHAPDADDASR
SSRIGSNFYRWNDGAVQNKTSDVRVGRERTPEKIDAFAPQKPKWKPKEEDVRLQQCVRAG
SAVSEESSEGTGVTAWVRCSAADLYFIRDRQTCNMMTTQRMRDLETTFNDDLVQRARKVK
ATQEPYKMERQTRPSWKNVNKCAKGLCGHAVCQNNNANNSEGSDSDISSSSSSDSDDAEE
GPNKELQFKINHPYRMHKEIWYNEPKELNDGPLCRCSLKARRFGIRHDIYPGEEPIPRCD
VNSNNLDRLHHYKITISPTTNFVSNHPTVIMFDGHEYKFEGFSIFAHEKLPPIPELQIIR
FNIVYTLHLVEEPVPENFSVRSLDLLSEYIFDEILELVDIDWKGQGATDEHCRRFHVMPR
FSRPFPENGKELLSMNDLLLYLLKVSKPLVNKTDLPFLLSLDNTEWNKFVDSFRHVIVTW
PGMRPSSLRIDQLDRTDCKKDTSGKTFPDIVHHGLRPAQLSYAGDPQYKKTFRAYMKFRH
ILHTRAKVTEKDKEKLEEFETELEKIRSKYSLKREVTVDIDSEGFILTGIRADICQHALL
LPVLFNHIRFHNCLKVLQANIGYQFKDISLLQLAMTHSSYKINYGNNIDHGRNALSNCGA
RQIEFGDSTVHFQHTRKRGLNMLMRIMSRFGKKEEVKSDIPHNERLEYLGDAVVEFISST
HLYRMLQDASEGPLTIYRGCLVQNAHLAILADRLRLQDFMLYAHGTDLCHTSTLNHAMAN
CFEALMGALYLDGGIELPDRVFSDTLWKGEPELHEIWTNTPPHPLVAEEPDGDRHWIKQS
PVLQSLVQFEEEMGYEFRHIRLLARALTMKSIGFNNLTLGNNQRMEYLGDTIMQLIVTDY
LYRHFPDHHEGHLSLLRSSIVSNRTQSIVSDELGLSSYLVKQQNVKRTGVKPKDQPNYTL
KMKERADLLEALLGAMFVDGGIAPCRVLCEVCFFPRLEKFILNQDWNDPKSHLQQCCLTL
RNVEDETPDIPIYKVINQSGPSNLRRYKVAVYFREKRLAIGEGGSIQQAEMDAANKALES
PDLADKNNMKIRYGRKGMKQPPGRQPWNSSWKQNQHTGQPFRNKGGQVQRQNRPRPGQPI
KNKGGQVPHLGGQQPVPPLAGPSNQDDQISQPEGQQIVPPQA
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagaagtacatctggtagtttccatgacaactttagtcctgggtcccctgat
atgacagcaatggaggctatcgactccgtgatgggcgactcagatgtagaaggcttctca
gaatcctccaggcacagacacagtcatagaagttccgtacattcaggagagggtctcgaa
aatcgcagcaggaagcatcgtcacagggaaggccatgatcaccaccacagacacaagcga
ggtcacaggtcacacaggagcagcagtagctatggaaaccatagtaaccaggagggcgac
caggagggcgttccagcgggatacatagcagtggatcaggagggggaggtggactccatg
cctcaggtgtataagcgttaccatgacctgctacatagacatattgacttggaagatgga
gaagttcacagtccaaatgaagtggaggaaggagagttcttggaacccaaagaaagactg
agaaaaagttcaaaacattcaagatcgcattcaaggaaacacaaaaggaaacattcaaag
gaacattcagacttggatgagtttgagttagattatgttgacaagtaccgtatcatggaa
actcaacatgaactgtcgagggagtccttgaggagacaaagggaaatggagatttataaa
tatgagaaagctaaaatgaaagaggcattgaaagaaagggcttattacgaatatgaacga
gctaaacttgaagctgccatgaaagagaaagctatgcggagggctattcgagaaaaggct
tatcgtgatgccgtgaaagaacaggcctacaaggatgctttgaagaagaaagcatatatg
gacgacatggaagagaaagccatgagggatgccatgaaagaaagagcttacagaaaggct
ttgaaagagaaagcctaccaagagtcaatgagagaacgggaaatctttggaaaatcaggt
tcaagtattgagtatggtgcaagtggtgcagtgttaatggatgacagcgatacgtttagt
gtgatgtccgactatagtatgaagtcggatcgtagggagcgggccctgtcggatcagggt
cgtagggtgcaaaggggactcagtggggccattctggttgaggaaagatcaccggagagg
acccttagctatagggatgtttatcctgaagaatttgatggagctcgagtgaaagtgggc
agaagtggagcaattttaaaggatgacatagaagaaagaggttttgggagtatgtctggg
gagagaattgttcgcggtcgaagtggggctgttttgagggaagatacggcagatgaaggt
gggaagatagttaggggtcgcagtggtgctatcttaatggaagataacgacgaacatggg
gattttattgcaaaaagaagtgatgcaagattgggtattggaaggacaggctctgttttg
cgagaggagatgccaggggcaaagatagctcgaggcgccagcggggctatacttttggag
gaccgtgaggacgagaagggctgggtcgagatgggaaaaactggagccatattacgggat
gaccgttctgacttgaccgatgctccagcccctaggtacatggaagaacggcaacatccg
ttcaagaaattcccaccaagaggaaacatgccaccaggagaacctagctggggtagcgca
ccaatgggcacaagaggccgggggtcattcaggggtcaaggtcggggcagaggtcgaggt
caaggtgaactgcggagccccatgcctgtacatgccccagatgctgacgatgcttcacgt
tctagcaggatcggatccaacttctacagatggaatgatggcgctgtgcaaaataaaacc
tcagatgtgcgtgttggaagggagagaactcctgagaaaattgacgcctttgcccctcaa
aaacctaaatggaaaccaaaggaggaggacgtgaggttacagcagtgtgtgcgagctggg
tctgcagtttccgaggaaagcagcgaaggcacgggagttacagcatgggtgagatgctcg
gccgctgacctctacttcataagggacagacagacttgcaacatgatgacgactcagcga
atgcgcgaccttgagaccacgtttaacgatgaccttgttcagcgagccagaaaggtcaag
gccacccaggaaccttacaagatggaacgacagacgaggccgagttggaagaacgtgaac
aaatgtgccaaaggtttatgtggtcatgcagtctgccagaacaacaacgccaacaattcg
gagggaagtgacagcgacatcagcagcagtagcagcagtgactccgatgatgctgaagag
ggtccaaacaaggaacttcagttcaagattaaccatccgtacaggatgcacaaggagatc
tggtacaatgagcctaaagagctcaatgatggaccactgtgtcgatgcagcctgaaggct
cgtagatttggaatacgccacgacatttaccctggggaggagcccattcccaggtgtgat
gtgaacagtaacaatctggaccgactgcaccattacaagatcaccatctctccaactaca
aactttgtgagcaatcatccaacagtgatcatgtttgatggacatgaatacaagtttgaa
ggattttcaatatttgcgcacgagaaattaccaccgattccagagctgcagatcatccgc
ttcaacattgtgtatactctgcacttggtagaggaacctgtaccagagaatttctctgtg
cgaagccttgacctgctgagtgagtacatatttgatgagattttggagctggttgacata
gattggaagggccagggtgccaccgatgaacactgcaggagattccatgtcatgcccagg
ttttcccgtccatttcctgagaatggtaaagagttgctgtccatgaacgacctgctgctg
tacttgctgaaagtgtccaagccgcttgtgaacaagactgatctcccctttctgctctcc
ctggacaacacagagtggaacaagttcgtcgacagcttcagacacgtcattgtcacatgg
cctggcatgaggccgagttcactgcgtattgaccagctggaccgtacagactgcaagaag
gacaccagcggtaagacgttccctgacattgtccaccacggcctgagaccggcccagcta
agctatgcaggagacccacagtacaagaagacgttccgagcatacatgaagttccggcac
attctgcacacgagggcaaaggtcacagagaaagacaaggagaagctggaggagtttgaa
acagagttggagaaaatacgatcaaaatactcactgaaaagagaagtgactgtggacatt
gacagtgaaggctttatcctcacaggtatcagagcagacatctgccagcatgccttgttg
ctgcctgtgctgttcaaccacatccgcttccacaactgcctgaaggtcctacaagcaaac
attggataccagttcaaggacatctcacttctacagttggcaatgacacacagttcttac
aagatcaactatgggaacaacattgaccatggccgcaatgcgctgtccaactgcggtgct
cgacagattgagtttggtgactccaccgtgcactttcagcacacgagaaagagaggactg
aacatgctgatgaggattatgtccaggtttggtaagaaggaggaggtcaagtcagacatc
ccacacaacgaacgcctcgagtacttgggcgatgcagtcgtggaattcatttctagtacc
cacctatatcggatgctgcaagatgcgtcagagggacccctgacaatctacagaggatgt
cttgtgcagaacgcccacctggccattctagcagatcgtctaagacttcaagactttatg
ctgtatgcacacggcacagacctttgtcacaccagcacgcttaaccatgccatggccaac
tgctttgaagctttaatgggtgccctgtacctggatggtggtatagagctcccagaccgt
gtgttctctgacaccctatggaagggggagccagagctgcacgagatctggaccaacacc
ccgccccaccccctcgtggccgaggaacctgacggggacaggcactggatcaaacagagt
cctgtactgcagagccttgttcagttcgaggaggagatggggtacgagtttagacacatc
cgtctgctggccagggccttgactatgaagagtatcggcttcaataacctcacactgggc
aataaccagcgtatggagtacctaggggacacgataatgcagctgattgtcactgactac
ctgtacaggcacttcccagaccaccacgagggacatctatcgctgctgcgtagttctata
gttagcaatcgcacacagtccatcgtgtcagacgagctcggactcagctcctacctggtc
aagcagcagaacgtgaagcgcactggcgtgaaacccaaggaccaacccaactacaccctc
aagatgaaggagagagcggacttgcttgaagccctgcttggtgccatgtttgtggatgga
ggtatcgctccttgcagggtgctatgtgaggtctgcttcttccctagactcgagaaattc
atcctgaaccaggactggaatgacccgaagtcacacctgcaacagtgctgcctcactttg
agaaatgtggaggacgagacgccagatatacccatatataaggttatcaatcagagtggt
ccgtccaacctgcgccgctacaaggtggcggtgtatttccgtgagaagcgtctcgctatt
ggtgaaggaggcagcatacaacaggctgagatggacgctgcaaacaaggccctagagtca
ccagatctggcagataagaacaacatgaagatcagatatggccgcaaaggcatgaagcaa
ccgccaggcagacagccttggaattcgtcctggaaacagaaccaacataccggacaacca
ttcaggaacaaggggggtcaggtccaacgtcaaaacagaccacggcctggtcaaccaatc
aagaataaggggggtcaggttccacatctggggggacaacagcctgtaccaccattggct
ggtccatcgaaccaggacgatcagatctcacagcctgaagggcagcagattgtaccacca
caggcttga
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integrated database retrieval system
