Dreissena polymorpha (zebra mussel): 127838089
Help
Entry
127838089 CDS
T08834
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127838089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpol03041
]
127838089
Spliceosome [BR:
dpol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127838089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EML
WD_LRWD1
NBCH_WD40
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
127838089
NCBI-ProteinID:
XP_052221624
LinkDB
All DBs
Position
7:83333730..83362462
Genome browser
AA seq
518 aa
AA seq
DB search
MDSDEESEAQFIAKRQKVLQYGSLEEKEKQRLAGGGGGEGSLAADAIKAGIAAGNINITS
GATMDLEKEYEQNQADLLAEFEKRKKAKKIQVSTDDSEVKAHLRKLGEPICLFGEGPADR
RERLRQELAQRGEDAMKQQKVQQETLRKKKDEENVTWYHEGAVSLKEARVWIAEYSIPKA
KARVLKQKADSHFAAQKSVLNQDIHKRLRAVSNECSQIGDNRPLSFCQFSPNSKILATAS
WSGLCKLWSIPDCSPIRTLRGHNCSVGAIVFHPQATVSLDETACSMASCSQDGAVKLWNL
VSDEPVADIEGHAPYRVSRLAYHPSGRFLATCCFDNSWRLWDLEVQEEILHQEGHSKPVY
DISFQCDGALAATGGLDGYGRLWDLRTGRCVMFLEGHLKSVLAVDFNPDGYHLATGSEDN
QAKIWDLRQRQCTYTIPAHNSLISKVKFQPTHGRYLVTASYDSSTKIWAHPVGTPIKTLA
GHEGKVTGVDVSPNLQYIASVSFDRTFKLWASEMKGGL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggattcagacgaggagagtgaagcccagtttatcgccaagcgacagaaggtgttgcag
tatggcagtctggaagagaaggaaaagcagcgcctggcgggcggtggcggcggggagggc
tccctcgctgctgacgctatcaaggccggcattgctgcagggaacattaacatcactagt
ggtgccaccatggatctagagaaagagtatgaacagaaccaagccgacttgctagcagaa
tttgaaaaacggaaaaaggccaagaaaattcaagtgtcaacagacgactctgaagtgaag
gctcatctgagaaaactcggggagccaatttgtctgtttggggagggcccagctgaccgc
agagagaggctgagacaggagcttgcacagagaggagaggacgccatgaagcaacagaaa
gtccaacaggaaactcttcgcaagaagaaagatgaggagaatgtcacttggtaccacgaa
ggtgcagtgtcactgaaagaagccagagtgtggattgcagagtattcaataccaaaggct
aaagcaagagtgctcaaacagaaggcagactcgcattttgcagcccagaaatccgtgttg
aatcaagatattcacaagagattaagggctgtcagtaacgaatgcagtcaaatcggagac
aacaggccactgtcgttctgtcagttctctccaaatagcaaaatactggccacagcatca
tggtctggcttgtgcaagctgtggtcaatacctgactgttcccctataaggaccttgagg
ggtcacaactgcagtgttggagcgatagtgtttcacccccaggccacagtgagtcttgat
gaaacagcctgctctatggcctcctgtagtcaggatggggcagtcaaactatggaacctg
gtcagtgacgaaccagttgcagacattgaaggacatgcaccgtatcgtgtctctagactg
gcgtatcatccttcaggccgattcctggccacttgctgttttgacaactcgtggagactg
tgggacctggaggtccaggaggagatactgcaccaggagggacacagcaagccagtctat
gacatcagcttccaatgtgacggggcactggccgccactgggggcctggatggctatggt
aggttgtgggatttacggactggaaggtgtgtcatgttcctggaaggtcaccttaagtcc
gtcctggcagtggacttcaatccggatgggtaccatctggccacaggtagtgaggataat
caggccaagatctgggacctgcgacagcggcagtgcacctacacaatacctgcccataac
agtctcattagtaaagtgaaattccagccaacacatgggcggtacttggtgacagcgtca
tatgattcctccacaaagatctgggctcatccggtgggtacacccatcaagacgctggcg
ggccatgagggcaaggtcactggggtcgacgtatcacccaatctccagtacattgcctcc
gtctcctttgacagaacattcaaactctgggcctcagaaatgaagggtggactctga
DBGET
integrated database retrieval system
