Dreissena polymorpha (zebra mussel): 127838430
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Entry
127838430 CDS
T08834
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-like
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127838430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpol03021
]
127838430
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127838430
Transcription machinery [BR:
dpol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127838430
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127838430
U7-dependent histone pre-mRNA processing factors
127838430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
DACNG
Motif
Other DBs
NCBI-GeneID:
127838430
NCBI-ProteinID:
XP_052222169
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All DBs
Position
1:complement(83765988..83804877)
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AA seq
704 aa
AA seq
DB search
MTSKRKPENQIPSEESDQLLIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLNGFASL
PFLDLVDIEEIDLLLVSHFHLDHCGGLPYLLEKTGFKGRCFMTHASKAIYRWLLSDYVKV
STIGTDDMLYTDKDIENSMDKIETINFHQEVEVGGVRFWCYTAGHVLGAAMFMIEIAGVK
VLYTGDFSCQEDRHLCSAEVPNVHPDVVITESTYGTHIHEDREDREARFTGLVHDIVTRG
GRCLIPVFALGRAQELLLILDEYWSNHPELHDVPIYYASSLAKKCMSVYQTYVNAMNDKI
KKQISISNPFVFKHISNLKSMEHFEDIGPSVVLASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKTILSEPEDILTMAGQKLPLKCSVDYISFSAHTDYKQTSGFLRTLKPTH
TVLVHGEQNEMSRLKAALLREYEDDTEYQMQVHNPRNTVAVEFHFRGEKMAKVVGSLAAK
KPVEGDRISGILVKRNFNYHIMDPTDLANYTELAMSTVTQRLSVRYTGPVSLLQYYLTQL
SGDLESQPAQRDRTVLRVFKSVNVIVEHKLVIIEWVSNPVTDMYADSVVTVVLQAENDPL
RQKGVPQAVKVDKSHIQECLLEMLADMFGKECIGKMIRGNNISITIDEKVALVNVENLEV
KCDDPDLQGVIQTAVTKLYQAIAPVKPALDLQTPSSGHEKKVPV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgaaacgtaaaccagaaaaccaaattccatctgaagaaagtgaccaattgctc
atcagaccacttggagctgggcaagaggttggtcggtcatgtattatgctggaattcaaa
gggaagaaaattatgctggactgtggcatacatccaggactcaatgggtttgcctcgttg
cccttccttgacctggtggacatagaagagatagacctcctgctggtcagccacttccac
ctggaccactgtgggggcctgccctacctactggagaaaacaggcttcaagggacgctgc
ttcatgactcatgcctccaaggccatttaccgctggctcctctcagactatgtcaaagtc
agtactattggaacagatgacatgctttacacagacaaggatatagagaacagtatggac
aagattgaaacaattaattttcaccaggaggtggaggttggaggggtgaggttctggtgt
tacacagcaggccatgtgctcggggcagccatgttcatgattgagatagctggagtaaag
gtgttgtatacaggagacttctcctgccaggaggacagacacttgtgttcagctgaggtg
ccaaatgtgcatcccgatgtcgtcatcactgagtccacatatggcacccacatccatgag
gacagggaggacagagaggccaggttcacggggcttgtacacgacattgtcacacgaggg
gggcgctgcttgataccggtctttgcattgggcagagcacaggaactactcttgattttg
gatgagtactggtcaaaccaccccgagctccatgatgtgcccatctactacgcctcctca
cttgccaagaagtgcatgagtgtctaccagacctacgtcaatgcaatgaatgacaaaata
aaaaaacagatctccatcagcaatccctttgtcttcaaacatatctcaaatctaaagagt
atggagcactttgaggacattgggccgtctgtggtgctagcctcgccaggcatgatgcag
agcggtctgtcaagggagctctttgagagctggtgcaccgacaagcgcaatggggtcatc
attgctggctactgtgtggagggtacccttgcaaagacaatcctgtcagagcctgaggat
attctgacaatggcaggtcagaagttgcccctcaagtgctctgtggactacatctccttc
tctgcccacacagactacaagcagaccagtggcttcctccgcaccttgaaacccacacac
acggtgctggtgcatggtgagcagaatgagatgtctcgtctgaaggctgccctgctgagg
gagtatgaggacgacacagagtaccagatgcaggtgcacaatccacgcaacactgtcgcg
gtcgagttccacttccggggagagaaaatggcaaaagtggtggggtccctggctgcaaag
aagcctgtagagggtgacaggatctctggaattctggtgaagcgtaacttcaattaccat
atcatggacccaactgaccttgccaactacacagagctggctatgagcacagttacccag
aggctaagtgtgcggtacacgggccctgtgagcctgctgcagtactacctcacccagctg
tctggggatctggagagccagcctgcgcagagagaccgcactgtgctacgagtatttaag
tctgtgaacgtgattgtggagcacaagctggtcatcattgagtgggtctcaaacccggtc
acagacatgtatgcagactctgtggtgaccgttgttcttcaggccgaaaatgatccactc
agacaaaaaggggtcccccaggcagtcaaggtggacaagagccacatccaagagtgcctg
ctggagatgctggcagacatgtttggcaaggagtgcattggcaagatgatccggggcaac
aacatctcaatcaccattgatgagaaggttgctctagtcaacgtggagaatcttgaagta
aagtgtgatgaccctgacctgcagggagtcatacagacagccgtgaccaagctgtaccag
gctattgccccagttaagcctgccctagatctgcagaccccctccagtggacatgaaaaa
aaggtcccagtgtag
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