Dreissena polymorpha (zebra mussel): 127838853
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Entry
127838853 CDS
T08834
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127838853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpol04121
]
127838853
Enzymes [BR:
dpol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127838853
Ubiquitin system [BR:
dpol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127838853
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127838853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
zf-C3HC4_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_EML
zf-RING_2
zf-RING_UBOX
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_HPS5
zf-C3HC4_3
Beta-prop_WDR35_TULP_N
zf-C3HC4_4
WD40_like
Beta-prop_IFT122_1st
WD40_RFWD3
zf-RING_5
RING_XB3-XBAT31
bZIP_1
DUF6904
Beta-prop_IFT140_1st
RMC1_N
zf-rbx1
Thiaminase_I-like_N
zf-RING_10
Sina_RING
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
127838853
NCBI-ProteinID:
XP_052222819
LinkDB
All DBs
Position
7:complement(27264730..27310588)
Genome browser
AA seq
622 aa
AA seq
DB search
MANRTQQVRQVARPRKRAQPPVFGGVTGSYEDKDSDYLCPICFDIIDEAHMTKCGHTFCF
KCIKTSLDTANRCPKCNFVIESPDLIFPNFMLNELIQKHRNRPEEKRIRLDHQNVPGSLD
LAELVMEETMDLTNVNTLLELLHNKKKQLEDDGRLAQNMVLKDFLEQVRQRKQEQLDQLS
KEISILDEDVETVKERINEHREKYPYLPDHLVPNSIDSSQPSSSVASCSQDGFNGSKNSG
KIWLQTSLASRRKKVAQHFDDLQQCYFNIRNDMYSGDMETGAGLDEFTESLSKFTHFSSF
RPLATLSYTSDLYSNSSIVSSIEFDRDCDFFAIAGVTKKIKVFEYGTVIKDVVDIHYPIG
EMTCSSKISCVTWSAYHKNLLASADYEGSITLWDAFTMQKTRVFQEHEKRCWSVDFNRMD
PKVIASGSDDSKVKLWSTQQENSTMCLETKANVCCVKFNPDSRHHLAFGSADHCVHYYDI
RNHKQPVMVFRGHKKAVSYTKFLNYSELVSASTDSQLKLWSTSKPTSVRTFNGHINEKNF
VGLATDGDYVACGSENNSLYVYYKGLSKQLLTYKFDTVKSVLEKDKKEDDSNEFVSAVAW
RPGSNVVVAANSQGTVKVLELV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctaataggacgcaacaagtccgacaggttgcacgaccaaggaaacgtgcacagccc
ccagtttttggtggagttaccggttcttatgaggacaaggacagtgattatttatgtccc
atttgttttgacattatcgatgaggcacacatgacaaagtgtggtcacacattctgcttt
aagtgtataaaaaccagccttgacacagcaaacagatgtccgaagtgtaattttgtgata
gaaagtcctgatctcatttttcccaatttcatgttgaacgagttgattcagaaacacaga
aacaggccggaagaaaaacggatcagattagaccaccaaaatgttccaggctccttagac
ctggctgagcttgttatggaagagaccatggatctaactaatgtgaacacactgttggaa
cttctgcacaacaagaagaaacagcttgaagacgatggtcgtcttgcacagaacatggtt
cttaaagatttcttagagcaggtcagacagcgaaaacaggagcaactggatcagctgtcc
aaggagatcagcatattggatgaggacgtggagactgtgaaagaaagaatcaatgagcac
agagaaaaatacccttaccttccagaccacctggtgcccaacagtatcgactcctcacaa
cccagtagtagtgtggcatcatgtagtcaggacggcttcaatggcagtaaaaattccggc
aaaatctggttacagacatctttagcatcacgacgaaaaaaggtggcccagcattttgat
gatctccaacagtgctatttcaatatcagaaatgacatgtactcaggtgacatggagacg
ggtgcagggctggatgagttcactgagagcctttcaaagttcacccacttcagttctttt
aggcctttagccactctcagctataccagcgacctctactcaaactccagcatcgtgtct
agcattgagtttgacagagactgtgatttctttgcgattgcgggcgtaaccaagaagatc
aaggtgtttgagtatggcaccgtgattaaggatgtggtggacatacactaccccatcgga
gagatgacctgcagctcaaagatcagttgtgtgacgtggagtgcctaccacaaaaacctc
ctggccagtgcggactatgagggctccatcaccctgtgggacgctttcaccatgcagaaa
acaagagtctttcaggaacatgagaagcgatgctggagtgtggatttcaacagaatggac
ccaaaggtgatagcgtcaggctctgatgactcaaaagtcaagctgtggtccacccaacag
gagaactccaccatgtgtctggagacgaaggccaacgtgtgctgtgtcaagttcaatcct
gacagtagacaccaccttgcttttggatctgcagatcattgcgtgcactactatgacatc
cgcaaccacaagcagcctgtgatggtgttcagaggccacaaaaaggccgtgtcttacacc
aagttcctcaattactcagaactagtctcagcatccacagacagccagttgaagttgtgg
agcacaagtaaacctacctcagtccgcacatttaacggacacatcaacgagaaaaacttt
gtcggcctggcaacagacggcgactatgtggcttgtggaagtgagaacaactctctctat
gtgtactacaagggactctccaagcagctgctcacctacaagtttgacaccgtgaaaagt
gtcctggagaaggataagaaagaggatgattccaatgagtttgtcagcgctgttgcctgg
cgaccaggatccaatgtagtagttgcagcaaatagtcaaggaacagtaaaggttctggag
cttgtatga
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