Dreissena polymorpha (zebra mussel): 127839495
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Entry
127839495 CDS
T08834
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127839495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127839495
03041 Spliceosome [BR:
dpol03041
]
127839495
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127839495
Spliceosome [BR:
dpol03041
]
Complex B
Other components
Prp19-related factors
127839495
Complex C
127839495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_15
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
127839495
NCBI-ProteinID:
XP_052223848
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All DBs
Position
7:complement(17564996..17622358)
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AA seq
846 aa
AA seq
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MVVKQCSSDVKMPEVDKDPRKNIFFEEEDLPFEEDILRNPYTVKCWLRYIEHKKEASVSA
LNVIYERALKELPGSYKLWYHYLKLRRQQVKGKCITEPAFEDVNSAHERSLVFMHKMPRI
WLDNCEFLMSQGLITRTRRTFDRALRALPITQHPRIWPLYIKFVRMYDLKETAVRVYRRY
LKLCKENAEEYIEYLKTIGWLDEAAQKLADIINDENFVSKEGKSKHQLWNELCDLVAKNP
DKVTSLNIEPIIRQGLKRYTDQIGVLWNSLADYYIRGGHFKGMGKQVDATQGFIPLHHLA
FCFVPQARDIYEESVQTVITVRDFTQVFDAYAQFEKNLISAKMESMEESGPTEDDDLDLE
LRLSRLKSLMDRRPLLLNSVLLRQNPHNVHEWHKRVKLFEGKPREIITTYTEAVQTVDPK
LASGKPHTLWCEFAKLYEGADQIEDARVIFDKAIKVGYKHVDDLASVYCEWCEMEIRHEN
YEDSLKIMQKATTPPPRSVAYHDETETVQSRVHKSLKVWSLYADLEESFGTLKSCKAVYD
RIIDLRIATPQIIMNYGLFLDENNYFEEAFKAYEKGIALFRWPNVYDLWNTYLSKFIDRY
GGKKLERARDLFEQCLENCPPKFAKAIYLLYAKLEEDFGLARHAMAVYDRATQAVLPEEQ
YEMFNVYIKRAAELYGVTYTRPIYEKAIEVLTNDQAWEMCLRFADLERKLGEIDRARAVY
AHCSQICDPRSTANFWQTWKDFEIKHGNEDTVREMLRIKRSVQALYNTQVNFMSAQMLAV
ASSKENQVFVRSNTTDEELGEMTKTTNPDNINIDEDFSTDEDEEVEEVQRQSVPMEVFGG
LATEED
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgaaacaatgctcttctgacgtcaaaatgccggaagtagacaaagatcctagg
aaaaatatatttttcgaagaggaggaccttccatttgaagaagatatactccgcaatcct
tacacggtgaaatgctggctgcgctatatcgagcacaagaaggaggccagtgtcagtgcc
ctcaatgtcatctatgagagagccctcaaggagctacctggaagctacaagttatggtac
cactatctgaagctgcgtcgtcagcaggtcaagggaaagtgtatcacggagcctgccttt
gaggatgtgaacagtgcgcacgagaggtccctcgtgttcatgcataaaatgccaaggatc
tggctggacaactgcgagttcctcatgtcacagggcctgatcacgcgcacgcgccgcacg
tttgaccgagctctgcgcgccctgcccattacccagcatccccgtatctggcccctgtac
atcaagtttgtccgtatgtacgacctcaaggagacagctgtgcgggtgtacagaaggtac
ctcaagctgtgtaaagagaacgcggaggagtacatagaatacttgaagacgattggttgg
ttggacgaggccgctcagaaacttgctgacatcattaacgatgagaactttgtgtccaag
gagggaaaatcgaaacaccagctctggaatgaactctgtgacctggttgctaagaaccca
gacaaagtgacgtcactcaacatcgagccaatcatacggcagggattgaagcgctacacg
gaccagataggtgtgctctggaattcactagctgactactacatcaggggcgggcatttt
aaagggatggggaagcaagttgatgccactcaagggtttatacctctccatcatctggcg
ttttgttttgtaccgcaggctcgggacatctatgaggagtcggtgcagacagtgattaca
gtgcgagacttcacgcaggtgtttgacgcgtatgcccagtttgagaagaacctgatcagc
gccaagatggagtccatggaggaaagcgggcctactgaggatgatgaccttgatctagag
ttgcgtctttcccgcctcaagtccctgatggaccgcagaccccttttgctgaacagcgtg
ttgctgcgccagaatccacacaacgtgcacgagtggcacaagagagtgaaactgtttgaa
gggaaacctagggagatcatcaccacgtacacagaggcagtgcaaaccgttgaccccaag
ctggcctcgggtaaacctcacacactctggtgcgaatttgcaaagctctacgaaggtgcc
gaccagattgaagacgctcgggtgatattcgacaaggccatcaaagtgggctacaaacat
gtggatgatctggcctcggtgtactgtgaatggtgtgagatggagattagacatgagaac
tatgaggattcactcaagattatgcagaaggctacaacaccgccacctaggagcgttgcg
tatcatgatgagacagagaccgttcagtcgagggttcacaagtcactcaaggtgtggtcc
ctgtatgccgacctggaagaaagcttcggtactttgaagtcctgtaaagcagtttacgat
cgcatcattgacctacgtattgccaccccacagatcatcatgaactatggactgtttctg
gacgagaacaactactttgaggaggcctttaaagcctatgagaagggtatagccctgttc
cggtggcccaacgtttatgatctgtggaacacctacctgtccaagttcatcgacagatac
ggaggaaagaagctggagcgagctagggatctgtttgaacaatgtcttgagaactgccca
ccaaagtttgctaaagccatctatctgctgtatgccaagcttgaagaggattttgggttg
gcacggcacgccatggcagtgtatgatagagctacacaagctgtgttaccggaggagcag
tatgagatgtttaatgtgtacataaagagagctgcggagttgtacggagtgacatacacg
aggccgatctacgagaaggccatcgaggttctaaccaacgaccaagcatgggagatgtgt
ctgcgttttgccgacctggagaggaagctgggcgagattgaccgtgccagggccgtgtat
gcccactgttcacagatctgtgaccccaggtctacagcaaacttttggcagacgtggaaa
gactttgagatcaaacacggcaatgaagacaccgttcgtgagatgttacgcatcaagaga
agtgtgcaggctttgtacaacacacaggtcaatttcatgtctgcccagatgttggcagtg
gcttcatccaaggaaaaccaagtatttgtcaggagcaacacaacagacgaggagctgggt
gagatgaccaagacaaccaacccggacaatatcaacatcgacgaagacttctccaccgat
gaggacgaggaggttgaagaggtccagcggcagtctgttcccatggaggtgtttgggggc
ctagcaacagaagaagactag
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