KEGG   Dreissena polymorpha (zebra mussel): 127839885
Entry
127839885         CDS       T08834                                 
Name
(RefSeq) 5'-3' exoribonuclease 1-like
  KO
K12618  5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
dpol  Dreissena polymorpha (zebra mussel)
Pathway
dpol03008  Ribosome biogenesis in eukaryotes
dpol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpol00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    127839885
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127839885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpol03019]
    127839885
   03009 Ribosome biogenesis [BR:dpol03009]
    127839885
   03016 Transfer RNA biogenesis [BR:dpol03016]
    127839885
   03036 Chromosome and associated proteins [BR:dpol03036]
    127839885
Messenger RNA biogenesis [BR:dpol03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127839885
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     127839885
Ribosome biogenesis [BR:dpol03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    127839885
Transfer RNA biogenesis [BR:dpol03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    127839885
Chromosome and associated proteins [BR:dpol03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    127839885
SSDB
Motif
Pfam: XRN_M XRN1_D1 XRN1_D2_D3 SH3_12
Other DBs
NCBI-GeneID: 127839885
NCBI-ProteinID: XP_052224237
LinkDB
Position
7:83589825..83641474
AA seq 1030 aa
MAARMRELLSHSNQLQQFVFENNLERRSVSKWVDTNHEYLDFPSLDDNTLRLLTLGTYQL
KFTGSYIQEYLGSDCNLQLYREMEGLIRVRPQTLEETTFHLLHLSLFREYLDIEFYALRD
TLTDFDYNLENVIDDLVLMGFLVGNDFIPHLPNLDINNDALHLLWRTYMEVLPHCGGYIN
NGGRLNLERFEKYLAELSKFDFDTFSQQAGDLKLRESKKAYDCVTVADDCVSVADDYVSV
ADEYVSVADNFSLFVCLFQMIVCLLQMISHYDCVSVADDFSEKYSDEDTLYNKYKRNYYM
TKMKYEHVTPEVLRDQAEGYVRGIQWILLYYYEGVPSWSWFYPHHYAPYMSDVKDFKDMS
LTFDLGTPFLPFEQLMAVLPAASKDLLPPPYQSLMINDSSPVIDFYPPQFETDLNGKQQD
WEAVVLIPFIDENLLLEAIRKVSHLLTEEDKSRNIHGPHLLYTHSETPGDTYPTSLPGTF
PDIAVNHARLTKKAAFHLASSELRKGLLSGARLDIFYPGFPTLIHIPYKAKLSKEGVKVF
KASSCGYNMMLHVEDDWCSKAIDQVAKEYLGKEVYVNWPHLYEAKVEEVCDNCWSYKYVE
GDKSTKSGTTSPGINRVKQDHLMANKWNKERDSIAERYKDQLGVVVGNTKILLRALPRTG
RKYILSSNGNVTMEKQFGNQPVAFALQATVKVKDLKVHDSSFCQFTSLTDYLPAGCQVFM
LGWPNYGCQGEVLSTDLQSGLVRINLSILKEPELNDVIHNKADHDEQYFQGYELAQRLGI
SSQLFSQLTGSVLITTGVAEVASQQHNPYKVNVGLNLKLTKHQEEVPGFTRFAKGNKWLY
SNKCVEILDEYIKNTYNLKDVQEYIKGLACTNIEKQKIGADFLSERVILALQSETNKVVE
INRLRQWWIEMRIVTVEPHLLYKPMITSGALIPDSSATYELFDRVVNTRQGFTVPFGLRG
TVVGIYLAEVEVNIMYDVLFDEDFAGGIAIRVSRSSQVDQDIVTTGEVTMKGIQVGARTE
QLARDNILGP
NT seq 3093 nt   +upstreamnt  +downstreamnt
atggctgcacgcatgcgagagttgctgagccattcaaaccagcttcagcaatttgtattt
gaaaacaacctggaacggcgaagtgtctccaagtgggttgataccaaccatgagtatctc
gactttccatctctagatgacaacacactgcggttattgactctaggtacttaccagtta
aaattcacaggcagttacatccaagagtacctaggcagtgactgcaatcttcagctgtac
cgagagatggaggggttaataagagtcagaccccagacacttgaagaaaccacattccat
ctcctgcacctgtccctgttccgggagtacctggatattgagttctatgccctccgtgat
acgttgacagacttcgattacaacctggagaatgtgattgatgacttggttctcatgggt
tttttggtgggcaacgacttcataccccacctgcccaacctagatatcaacaatgatgcc
ttgcaccttctgtggaggacctatatggaggtgctgcctcattgtggaggatacattaac
aatggtggaaggctgaacttagaaaggtttgaaaaatacctcgctgaactctcaaagttt
gactttgacacgttctctcagcaggctggggatctcaagttgcgggagtcaaagaaagct
tatgattgtgtgactgttgcagatgattgtgtgtctgttgcagatgattatgtgtctgtt
gcagatgaatatgtgtctgttgcagataatttctcactgtttgtgtgtctgtttcagatg
attgtgtgtctgctgcagatgatttctcactatgattgtgtgtctgttgcagatgatttc
tcagagaaatattcagatgaggacacattgtacaataaatacaagaggaactattacatg
accaagatgaagtatgaacatgtcactcctgaggtactgcgtgaccaagcagaaggctat
gtgagaggcattcagtggattctgctgtattactatgaaggggtgccttcttggagttgg
ttctacccacaccactatgcaccatacatgagtgacgttaaggacttcaaggatatgtcc
ttgacctttgacctgggcaccccgttcctgccatttgagcagctcatggccgtgctgcct
gcagccagtaaagatctcctgccaccgccatatcagagcttgatgatcaatgactcgtct
ccagtgattgatttctacccccctcagtttgagacagatctcaatggaaagcagcaagac
tgggaggctgtcgtgctcatcccctttattgacgagaaccttcttctagaagccatcagg
aaagtgtcccacttgctgacggaggaggataagtctcgtaacatacacggcccccacctg
ctgtacacgcactctgagacccctggtgacacctacccgacctctctacccggcaccttc
ccagacattgcagtcaaccatgccaggttaacgaagaaggctgcgttccaccttgcctct
agtgagctgaggaaggggctgctttcaggggccaggttggatatcttctatccaggcttc
cctaccctcatacacataccttacaaggcaaagctcagcaaggaaggtgtgaaggtgttc
aaggccagtagttgtggttacaacatgatgctgcatgtggaggatgattggtgtagcaag
gctatagaccaggtggcgaaggaatacctcggtaaggaggtctacgtcaactggccccac
ctgtatgaggccaaggtcgaggaggtctgtgataactgctggagttacaagtatgttgag
ggtgacaagtccaccaaatcaggtacgacaagtccaggcattaatcgtgtgaagcaggat
catctgatggccaacaaatggaacaaggagagggattcaatcgctgaaagatacaaggat
cagctgggggtggtggttggcaataccaagattctgctgagagctctccccaggactggc
aggaaatatatcctgtcatcaaatggaaatgtcactatggaaaagcagtttgggaaccag
ccagtggcatttgctttacaagcaacagttaaagttaaggacttgaaagtgcatgactct
agtttctgccagttcacctccctgactgactacctgccggcaggctgccaggtgttcatg
ctgggctggcccaactacggctgccagggagaggtgctaagcactgatctgcagagtggc
ctggtcagaatcaacctctcaatcctcaaggagcctgaattgaatgatgtgatccacaac
aaggcggaccatgatgagcagtacttccaagggtatgagcttgctcagagacttggcatc
agcagccaactgttctctcaactcactggcagtgtattaatcaccaccggagttgctgag
gttgcaagtcaacagcacaacccttacaaagtaaatgtgggtttgaacttgaagttaacg
aaacaccaggaggaggtaccaggcttcaccaggtttgcaaaagggaacaagtggctctac
tctaataaatgtgtagagattctcgatgagtacataaagaacacctacaacttgaaggat
gtacaggagtacatcaagggactggcatgcacgaacattgaaaaacagaagataggggcc
gacttcttgtctgagagggtgatactggccctgcagagtgagaccaacaaggttgtggag
ataaacagactacgccagtggtggattgaaatgaggattgtgacagtggagcctcacctt
ctgtataagccgatgattacaagtggggctctgattcctgactccagcgccacctacgag
ctgtttgatcgggtcgtaaacacgcgccagggattcacagtaccttttggactccgtggt
acggttgtgggcatttatttagcagaggtggaagtgaacataatgtacgacgtgctgttt
gatgaagattttgctggtggtatcgctatcagggtcagcagatccagccaggtagatcag
gatatcgtgacaacaggggaggtaacaatgaagggaatacaggtcggggctcgtacagag
caactggccagagacaatattcttggcccgtaa

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