Dreissena polymorpha (zebra mussel): 127841374
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Entry
127841374 CDS
T08834
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127841374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127841374
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127841374
mRNA degradation factors
3'-5' decay
Pan complex
127841374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
zf_CCCH_4
zf-CCCH
zf-CCCH_4
zf-CCCH_2
Torus
DUF1659
Motif
Other DBs
NCBI-GeneID:
127841374
NCBI-ProteinID:
XP_052226137
LinkDB
All DBs
Position
8:complement(16872943..16945876)
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AA seq
812 aa
AA seq
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MTSVFTNAKKPALCRYFVSKGSCSFGEECQYLHQSPVGFAAHNFSNQFPNGSLSKTSPIN
LLESLGMPVQEGTTTNGDPFFNTTFSGAETSATSQSEFQPFSRPGPISRQPRGSVVMSGN
GVLTSNSPMSNSSMSQPPPLSSPYSVSSMTPNKVPISHSTPLSQHQTSHPPPQNGPVSSM
MNGQLAPNMKHYLNNSYDSNLTNDFSALNLSVPNSSKGGNPMGSEFIPKMPGGLSHSTSS
PNFSNFNAAAPPPLGTLPVNTTASAHLAGLNITASSSPNHSPRLSPTNSPLMMRRTGSPV
APLRTKLPPGSTIQENVGGTTYFYNAEDFTPQREGIQLPNFTMYQGPPPHVSHMKVKSNM
PGFFMPDELKMEVLNRSAITMAQIDLAQNIDIPPEVDTYRNLFPLEATPDNPHHKSKTFG
YPTTCYKALNTKDGQTYCLRRIHGFRLVHTKCMTIVDMWKKMYHPNIVQLREVFTTKAFS
DHSIVFVYDYYPMAETLLSKHQQMNGVHNPFNMDPSVRPFSSKGKGSSAPRQHAGLLPES
LIWSYVVQLSSALRAIHAAGLSCRTLDPSKILIYGKSRLRLNCCGIFDVLTFDNNQSNPM
ALTPHYQQEDLISLGKVVLALACNSVMAIQRDNMQASMELVARNYSADLKNLILYLLGNQ
NRPRSINDIMPMIGARFYTQLDSAQLRSDVLETELAKEVENGRLFRLLCKMGTINERPEF
FLDPQWSDTGDRYMLKLFRDYVFHQVDENGAPWVDMSHIVMCLNKLDAGSPEKISLVSRD
EQNILVVSYSELKQCFENAFRDVLNPSSQGGL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgtgtttacgaatgctaaaaagcctgcactgtgtcgatactttgtgagcaag
ggttcgtgttcgtttggtgaagagtgtcaatatttacatcaatcgccagtcggatttgct
gctcacaatttttcaaatcagtttccaaatggcagtttgtcaaagactagtccaataaac
ttgttggaaagtttaggaatgccagttcaagaagggactactaccaatggagatccattt
ttcaacaccacattttctggagcagaaacatcagccacatctcagtctgaatttcagcca
ttttcacgccctggacctatctcacgacagccacgaggcagtgtagtgatgtctggcaat
ggagtgctgacctccaatagtccaatgtcaaacagcagcatgagtcagcccccgccactc
tccagcccctatagtgtcagctccatgacccccaacaaggtccctatctcccatagcaca
cccctgtcacagcaccagacgagccacccgcccccacagaatggccctgtctccagcatg
atgaacggacagctggcccccaacatgaaacactacctgaataacagctatgacagcaat
ctcacaaatgacttttcagcattgaatctctcagttcctaactcttcaaagggaggcaac
ccaatggggtcagagttcatccccaagatgcctggtggactatcacacagcacaagctct
cctaacttctccaacttcaacgctgcagcccctcccccactgggcaccctgcctgtcaac
accactgccagcgcacaccttgctggtctgaacatcactgccagttcaagccccaatcac
agccctcgcctgtctcccaccaattcccccctgatgatgcgccgcacaggctccccagtg
gcccccctgcgcaccaagctacccccgggcagcaccatacaggagaatgtgggcgggacc
acctacttctacaacgctgaggacttcacaccgcagagagagggcattcagctgcccaac
ttcacgatgtaccagggcccacccccacatgtgtcccacatgaaggtcaagtccaacatg
cctggcttcttcatgccagatgaactcaaaatggaggtcctcaacaggagcgcaatcacc
atggctcagatagaccttgcacagaacatagacatcccgccagaggtggacacctacagg
aacctgtttcccctggaggccaccccagacaacccccatcacaagtccaaaacatttggc
taccccaccacctgctacaaggctctcaacaccaaagatgggcagacatattgcctaaga
cgaattcatgggttccggctggttcacaccaagtgtatgaccatcgtggacatgtggaag
aagatgtaccaccccaacatagtgcagctgagggaggtctttaccaccaaggctttcagt
gaccattcaattgtgtttgtgtatgactactaccccatggctgaaaccttgctgtccaag
catcagcaaatgaatggtgttcacaaccccttcaacatggacccctccgtcaggcccttc
agctctaaaggaaaaggctcgtcggctcccaggcagcatgcaggtctcctgcctgagagt
ctgatctggtcgtacgtggtacagctgtcctcggctctgcgagccatacacgctgcagga
ctctcgtgtaggacactggacccttcaaagattctcatatacggcaagtccagattgcgc
ctgaactgctgtgggatctttgatgtgttgacatttgacaataaccagagcaaccccatg
gcccttactccacactatcagcaggaagatctgatctctctaggcaaggtggttctcgcc
ctggcatgtaacagtgtaatggcaatacagagggacaacatgcaggcctccatggaactc
gtggccaggaactactccgctgatctcaaaaatctcatactatacttgttgggtaaccag
aatcgtccccgcagcatcaatgacatcatgcccatgattggtgcacgcttctacacgcag
cttgattcagcacaactgcgcagtgatgtccttgaaactgaactagccaaggaggtggag
aatgggcgcctgttccgacttctgtgtaagatgggaactatcaacgagagacctgagttc
ttcctggacccccaatggtcagacacaggggaccggtacatgttgaagctgttcagagac
tacgtgttccaccaggtggatgagaacggagcaccctgggtggacatgtcccacatcgtg
atgtgcctcaacaagcttgatgcgggctccccagagaagatcagcctcgtgtcgagggat
gagcagaacatcctggtggtctcatactcggagctcaagcagtgctttgagaacgcattc
cgggatgtgctgaatcccagtagccagggggggctgtag
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